RNA–Protein interactions for RNA: ENSMUST00000029422.13

Shox2-201, Transcript of Short stature homeobox protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shox2, Length 3,079 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-201ENSMUST00000029422 2310034G01RikA0A286YDL3 209 aa13.34□□□□□ -0.27
Shox2-201ENSMUST00000029422 Sfta2E9PXB6 77 aa13.34□□□□□ -0.27
Shox2-201ENSMUST00000029422 Ighv2-5A0A0A6YY69 116 aa13.33□□□□□ -0.27
Shox2-201ENSMUST00000029422 Gm17577J3QNF7 156 aa13.33□□□□□ -0.27
Shox2-201ENSMUST00000029422 Klk9Q32M27 251 aa13.33□□□□□ -0.27
Shox2-201ENSMUST00000029422 AY074887Q8R5F9 132 aa13.33□□□□□ -0.28
Shox2-201ENSMUST00000029422 Cd164Q9R0L9 197 aa13.33□□□□□ -0.28
Shox2-201ENSMUST00000029422 FlnbQ80X90 2602 aaKnown RBP13.31□□□□□ -0.28
Shox2-201ENSMUST00000029422 Igkv8-28A0A0G2JE47 121 aa13.31□□□□□ -0.28
Shox2-201ENSMUST00000029422 A0A286YE02 88 aa13.31□□□□□ -0.28
Shox2-201ENSMUST00000029422 Ndufc1Q9CQY9 76 aa13.31□□□□□ -0.28
Shox2-201ENSMUST00000029422 Serp1Q9Z1W5 66 aa13.3□□□□□ -0.28
Shox2-201ENSMUST00000029422 Gm11011D3Z3L9 86 aa13.3□□□□□ -0.28
Shox2-201ENSMUST00000029422 Gm10770F7D043 238 aa13.29□□□□□ -0.28
Shox2-201ENSMUST00000029422 Dph3Q8K0W9 82 aa13.28□□□□□ -0.28
Shox2-201ENSMUST00000029422 A330070K13RikQ8CA53 115 aa13.28□□□□□ -0.28
Shox2-201ENSMUST00000029422 Prr15lQ8JZM2 100 aa13.28□□□□□ -0.28
Shox2-201ENSMUST00000029422 A730009L09RikA0A1B0GS82 72 aa13.28□□□□□ -0.28
Shox2-201ENSMUST00000029422 CrygeQ03740 174 aa13.28□□□□□ -0.28
Shox2-201ENSMUST00000029422 A530084C06RikQ3UTW2 186 aa13.28□□□□□ -0.28
Shox2-201ENSMUST00000029422 Cdk2ap2Q9CPY4 127 aa13.28□□□□□ -0.28
Shox2-201ENSMUST00000029422 Krtap24-1G3X9A2 248 aa13.27□□□□□ -0.29
Shox2-201ENSMUST00000029422 Notch1Q01705 2531 aa13.27□□□□□ -0.29
Shox2-201ENSMUST00000029422 Ank2Q8C8R3 3898 aa13.26□□□□□ -0.29
Shox2-201ENSMUST00000029422 P06320 134 aa13.26□□□□□ -0.29
Shox2-201ENSMUST00000029422 Smim29Q8R043 75 aa13.25□□□□□ -0.29
Shox2-201ENSMUST00000029422 Defb12Q8K4N3 78 aa13.24□□□□□ -0.29
Shox2-201ENSMUST00000029422 Pde6gP09174 87 aa13.24□□□□□ -0.29
Shox2-201ENSMUST00000029422 BaalcQ8VHV1 145 aa13.24□□□□□ -0.29
Shox2-201ENSMUST00000029422 Notch2O35516 2470 aa13.23□□□□□ -0.29
Shox2-201ENSMUST00000029422 Igkv3-2A0A075B5P0 119 aa13.22□□□□□ -0.29
Shox2-201ENSMUST00000029422 Tcl1b5P56845 121 aa13.21□□□□□ -0.29
Shox2-201ENSMUST00000029422 Gm5617Q91VN2 117 aa13.21□□□□□ -0.29
Shox2-201ENSMUST00000029422 Spink8Q09TK9 105 aa13.21□□□□□ -0.29
Shox2-201ENSMUST00000029422 CrygfQ9CXV3 174 aa13.21□□□□□ -0.29
Shox2-201ENSMUST00000029422 Cox7b2Q9D2H1 82 aa13.21□□□□□ -0.29
Shox2-201ENSMUST00000029422 PolqQ8CGS6 2544 aa13.21□□□□□ -0.29
Shox2-201ENSMUST00000029422 Defa28D3Z1V9 94 aa13.21□□□□□ -0.3
Shox2-201ENSMUST00000029422 Gm10570F6VB42 170 aa13.21□□□□□ -0.3
Shox2-201ENSMUST00000029422 AtrQ9JKK8 2635 aa13.2□□□□□ -0.3
Shox2-201ENSMUST00000029422 Gm10337F7DEP7 55 aa13.2□□□□□ -0.3
Shox2-201ENSMUST00000029422 Camk2n2Q78WH7 79 aa13.2□□□□□ -0.3
Shox2-201ENSMUST00000029422 Psors1c2Q80ZC9 134 aa13.2□□□□□ -0.3
Shox2-201ENSMUST00000029422 Elof1P60003 83 aa13.19□□□□□ -0.3
Shox2-201ENSMUST00000029422 BC048502Q80Y74 154 aa13.19□□□□□ -0.3
Shox2-201ENSMUST00000029422 Gm17509Q9CZ61 145 aa13.18□□□□□ -0.3
Shox2-201ENSMUST00000029422 Ighv2-2A0A075B5P8 116 aa13.17□□□□□ -0.3
Shox2-201ENSMUST00000029422 P01821 116 aa13.17□□□□□ -0.3
Shox2-201ENSMUST00000029422 6430550D23RikE9Q1X6 194 aa13.16□□□□□ -0.3
Shox2-201ENSMUST00000029422 Vpreb2P13373 142 aa13.16□□□□□ -0.3
Shox2-201ENSMUST00000029422 Reg3bP35230 175 aa13.16□□□□□ -0.3
Shox2-201ENSMUST00000029422 HrnrQ8VHD8 2496 aa13.15□□□□□ -0.3
Shox2-201ENSMUST00000029422 Gm10401E9Q3K6 71 aa13.15□□□□□ -0.3
Shox2-201ENSMUST00000029422 Defb40Q70KL2 73 aa13.15□□□□□ -0.3
Shox2-201ENSMUST00000029422 Gm11213A0A1B0GR83 88 aa13.14□□□□□ -0.31
Shox2-201ENSMUST00000029422 Q8BT88 171 aa13.12□□□□□ -0.31
Shox2-201ENSMUST00000029422 Pou2af1Q64693 256 aa13.11□□□□□ -0.31
Shox2-201ENSMUST00000029422 Igkv4-92A0A0B4J1I2 117 aa13.11□□□□□ -0.31
Shox2-201ENSMUST00000029422 Snhg11Q4G0K9 87 aa13.11□□□□□ -0.31
Shox2-201ENSMUST00000029422 UqcrqQ9CQ69 82 aa13.1□□□□□ -0.31
Shox2-201ENSMUST00000029422 Tenm1Q9WTS4 2731 aa13.09□□□□□ -0.31
Shox2-201ENSMUST00000029422 C130032M10RikQ8C888 123 aa13.09□□□□□ -0.31
Shox2-201ENSMUST00000029422 Sprr2jO70561 109 aa13.08□□□□□ -0.32
Shox2-201ENSMUST00000029422 Ighv8-13A0A075B5Y0 101 aa13.07□□□□□ -0.32
Shox2-201ENSMUST00000029422 Cmc4Q61908 68 aa13.06□□□□□ -0.32
Shox2-201ENSMUST00000029422 Trav14-1A0A0G2JF94 121 aa13.05□□□□□ -0.32
Shox2-201ENSMUST00000029422 CicQ924A2 2510 aa13.04□□□□□ -0.32
Shox2-201ENSMUST00000029422 Cox6a2P43023 97 aa13.02□□□□□ -0.33
Shox2-201ENSMUST00000029422 Sprr4Q8CGN8 76 aa13.02□□□□□ -0.33
Shox2-201ENSMUST00000029422 Gm44790A0A0N4SV91 103 aa13□□□□□ -0.33
Shox2-201ENSMUST00000029422 Col6a5A6H584 2640 aa12.99□□□□□ -0.33
Shox2-201ENSMUST00000029422 Mrpl34Q99N91 92 aa12.99□□□□□ -0.33
Shox2-201ENSMUST00000029422 Tenm4Q3UHK6 2771 aa12.98□□□□□ -0.33
Shox2-201ENSMUST00000029422 Gm37389A0A0A6YW05 95 aa12.97□□□□□ -0.33
Shox2-201ENSMUST00000029422 Fam168bQ80XQ8 194 aa12.97□□□□□ -0.33
Shox2-201ENSMUST00000029422 Gm17521F6QAC8 156 aa12.97□□□□□ -0.33
Shox2-201ENSMUST00000029422 Fbn1Q61554 2873 aaKnown RBP12.96□□□□□ -0.33
Shox2-201ENSMUST00000029422 Gm10197F6QEY5 67 aa12.96□□□□□ -0.33
Shox2-201ENSMUST00000029422 Gm28374F6SG70 93 aa12.95□□□□□ -0.34
Shox2-201ENSMUST00000029422 Bean1Q9EQG5 255 aa12.95□□□□□ -0.34
Shox2-201ENSMUST00000029422 Stab1Q8R4Y4 2571 aa12.95□□□□□ -0.34
Shox2-201ENSMUST00000029422 H2al1bA0A087WP11 105 aa12.94□□□□□ -0.34
Shox2-201ENSMUST00000029422 Erdr1J3QMM0 206 aa12.94□□□□□ -0.34
Shox2-201ENSMUST00000029422 H2al1kJ3QP08 105 aa12.94□□□□□ -0.34
Shox2-201ENSMUST00000029422 H2al1eQ810S6 105 aa12.94□□□□□ -0.34
Shox2-201ENSMUST00000029422 H2al1mQ9DAD9 105 aa12.94□□□□□ -0.34
Shox2-201ENSMUST00000029422 Hivep1Q03172 2688 aa12.94□□□□□ -0.34
Shox2-201ENSMUST00000029422 Igkv8-19A0A0G2JFN8 121 aa12.93□□□□□ -0.34
Shox2-201ENSMUST00000029422 PscaP57096 123 aa12.93□□□□□ -0.34
Shox2-201ENSMUST00000029422 Coa6Q8BGD8 79 aa12.93□□□□□ -0.34
Shox2-201ENSMUST00000029422 Spint4Q9D263 159 aa12.93□□□□□ -0.34
Shox2-201ENSMUST00000029422 Gm7276Q3TYW4 209 aa12.92□□□□□ -0.34
Shox2-201ENSMUST00000029422 Nsd1O88491 2588 aaKnown RBP12.91□□□□□ -0.34
Shox2-201ENSMUST00000029422 Gm7138L7N2C3 230 aa12.89□□□□□ -0.35
Shox2-201ENSMUST00000029422 Gm3238W4VSP7 230 aa12.89□□□□□ -0.35
Shox2-201ENSMUST00000029422 Csmd3Q80T79 3707 aa12.87□□□□□ -0.35
Shox2-201ENSMUST00000029422 Ube2bP63147 152 aa12.87□□□□□ -0.35
Shox2-201ENSMUST00000029422 Igkv3-4A0A140T8Q4 119 aa12.86□□□□□ -0.35
Shox2-201ENSMUST00000029422 1700018G05RikA0A1B0GSI2 66 aa12.86□□□□□ -0.35
Shox2-201ENSMUST00000029422 Wfdc13Q5DQQ6 81 aa12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 97.8 ms