RNA–Protein interactions for RNA: ENSMUST00000029422.13

Shox2-201, Transcript of Short stature homeobox protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shox2, Length 3,079 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-201ENSMUST00000029422 NischQ80TM9 1593 aa35.46■■■■□ 3.27
Shox2-201ENSMUST00000029422 Rhox8Q6VSS7 320 aa34.72■■■■□ 3.15
Shox2-201ENSMUST00000029422 Abcc9P70170 1546 aa34.23■■■■□ 3.07
Shox2-201ENSMUST00000029422 Gm35339A0A140LHH9 1649 aa33.78■■■■□ 3
Shox2-201ENSMUST00000029422 Rtl1Q7M732 1744 aa33.49■■■□□ 2.95
Shox2-201ENSMUST00000029422 Rpgrip1Q9EPQ2 1331 aa33.43■■■□□ 2.94
Shox2-201ENSMUST00000029422 Ccdc180J3QNE4 1664 aa33.35■■■□□ 2.93
Shox2-201ENSMUST00000029422 Abcc8B2RUS7 1588 aa33.3■■■□□ 2.92
Shox2-201ENSMUST00000029422 Ehmt2Q9Z148 1263 aaKnown RBP33.09■■■□□ 2.89
Shox2-201ENSMUST00000029422 Acin1Q9JIX8 1338 aaKnown RBP32.81■■■□□ 2.84
Shox2-201ENSMUST00000029422 Zcchc6Q5BLK4 1491 aaKnown RBP32.38■■■□□ 2.77
Shox2-201ENSMUST00000029422 Pcgf6Q99NA9 353 aa32.2■■■□□ 2.74
Shox2-201ENSMUST00000029422 Ccdc136Q3TVA9 1136 aa32.14■■■□□ 2.74
Shox2-201ENSMUST00000029422 HrcG5E8J6 738 aa31.96■■■□□ 2.71
Shox2-201ENSMUST00000029422 Dcaf1Q80TR8 1506 aa31.77■■■□□ 2.68
Shox2-201ENSMUST00000029422 Trim41Q5NCC3 630 aa31.58■■■□□ 2.65
Shox2-201ENSMUST00000029422 Supt5hO55201 1082 aaKnown RBP31.53■■■□□ 2.64
Shox2-201ENSMUST00000029422 Rb1cc1Q9ESK9 1588 aa31.14■■■□□ 2.57
Shox2-201ENSMUST00000029422 Zeb1Q64318 1117 aa31.06■■■□□ 2.56
Shox2-201ENSMUST00000029422 Neurod1Q60867 357 aa31.03■■■□□ 2.56
Shox2-201ENSMUST00000029422 Gab3Q8BSM5 595 aa30.85■■■□□ 2.53
Shox2-201ENSMUST00000029422 Cep164Q5DU05 1446 aa30.7■■■□□ 2.5
Shox2-201ENSMUST00000029422 Baz1aO88379 1555 aa30.66■■■□□ 2.5
Shox2-201ENSMUST00000029422 ScribQ80U72 1612 aa30.63■■■□□ 2.49
Shox2-201ENSMUST00000029422 Cngb1E1AZ71 1325 aa30.63■■■□□ 2.49
Shox2-201ENSMUST00000029422 Chic1Q8CBW7 227 aa30.5■■■□□ 2.47
Shox2-201ENSMUST00000029422 Mier1Q5UAK0 511 aa30.48■■■□□ 2.47
Shox2-201ENSMUST00000029422 Sall2Q9QX96 1004 aa30.45■■■□□ 2.47
Shox2-201ENSMUST00000029422 NefmP08553 848 aa30.4■■■□□ 2.46
Shox2-201ENSMUST00000029422 Kdm5dQ62240 1548 aa30.36■■■□□ 2.45
Shox2-201ENSMUST00000029422 Las1lA2BE28 776 aaKnown RBP30.34■■■□□ 2.45
Shox2-201ENSMUST00000029422 Rsf1E9PWW9 1441 aaKnown RBP30.21■■■□□ 2.43
Shox2-201ENSMUST00000029422 Wdr66E9Q743 1299 aa30.13■■■□□ 2.41
Shox2-201ENSMUST00000029422 Csrnp3P59055 597 aa30.1■■■□□ 2.41
Shox2-201ENSMUST00000029422 1700123L14RikQ3V2K7 440 aa30.07■■■□□ 2.4
Shox2-201ENSMUST00000029422 Ppargc1bQ8VHJ7 1014 aa30.02■■■□□ 2.4
Shox2-201ENSMUST00000029422 Smarca2Q6DIC0 1577 aa29.98■■■□□ 2.39
Shox2-201ENSMUST00000029422 UbtfP25976 765 aaKnown RBP29.97■■■□□ 2.39
Shox2-201ENSMUST00000029422 Anks4bQ8K3X6 423 aa29.95■■■□□ 2.39
Shox2-201ENSMUST00000029422 Ccdc88bQ4QRL3 1481 aa29.91■■■□□ 2.38
Shox2-201ENSMUST00000029422 NacadQ5SWP3 1504 aa29.9■■■□□ 2.38
Shox2-201ENSMUST00000029422 Aebp2Q9Z248 504 aaKnown RBP29.88■■■□□ 2.37
Shox2-201ENSMUST00000029422 Esf1Q3V1V3 845 aaKnown RBP29.74■■■□□ 2.35
Shox2-201ENSMUST00000029422 Cdk11bP24788 784 aaKnown RBP29.7■■■□□ 2.35
Shox2-201ENSMUST00000029422 Nop58Q6DFW4 536 aaKnown RBP29.67■■■□□ 2.34
Shox2-201ENSMUST00000029422 Gm38655A0A286YDK6 273 aa29.61■■■□□ 2.33
Shox2-201ENSMUST00000029422 Crybg2B7ZCC2 1516 aa29.58■■■□□ 2.33
Shox2-201ENSMUST00000029422 Brd4Q9ESU6 1400 aaKnown RBP29.57■■■□□ 2.32
Shox2-201ENSMUST00000029422 Golga3P55937 1487 aa29.55■■■□□ 2.32
Shox2-201ENSMUST00000029422 Myt1lP97500 1187 aa29.51■■■□□ 2.31
Shox2-201ENSMUST00000029422 ClspnQ80YR7 1315 aa29.48■■■□□ 2.31
Shox2-201ENSMUST00000029422 Cecr2E9Q2Z1 1453 aa29.46■■■□□ 2.31
Shox2-201ENSMUST00000029422 Aplp2Q06335 707 aa29.33■■■□□ 2.29
Shox2-201ENSMUST00000029422 CenpbP27790 599 aa29.32■■■□□ 2.28
Shox2-201ENSMUST00000029422 TonslQ6NZL6 1363 aa29.27■■■□□ 2.28
Shox2-201ENSMUST00000029422 Synj1Q8CHC4 1574 aa29.25■■■□□ 2.27
Shox2-201ENSMUST00000029422 Sycp2Q9CUU3 1500 aa29.22■■■□□ 2.27
Shox2-201ENSMUST00000029422 Plekhg3Q4VAC9 1341 aa29.11■■■□□ 2.25
Shox2-201ENSMUST00000029422 Npm2Q80W85 207 aa29.06■■■□□ 2.24
Shox2-201ENSMUST00000029422 CftrP26361 1476 aa28.94■■■□□ 2.22
Shox2-201ENSMUST00000029422 Myt1Q8CFC2 1127 aa28.91■■■□□ 2.22
Shox2-201ENSMUST00000029422 Eid3Q3V124 375 aa28.89■■■□□ 2.21
Shox2-201ENSMUST00000029422 Rapgef2Q8CHG7 1496 aa28.87■■■□□ 2.21
Shox2-201ENSMUST00000029422 SafbD3YXK2 937 aaKnown RBP28.83■■■□□ 2.21
Shox2-201ENSMUST00000029422 Mapk8ip2Q9ERE9 830 aa28.82■■■□□ 2.2
Shox2-201ENSMUST00000029422 Cc2d2aQ8CFW7 1633 aa28.81■■■□□ 2.2
Shox2-201ENSMUST00000029422 Cep162Q6ZQ06 1403 aa28.81■■■□□ 2.2
Shox2-201ENSMUST00000029422 Ap3b1Q9Z1T1 1105 aa28.8■■■□□ 2.2
Shox2-201ENSMUST00000029422 Top2bQ64511 1612 aa28.8■■■□□ 2.2
Shox2-201ENSMUST00000029422 Clip1Q922J3 1391 aa28.79■■■□□ 2.2
Shox2-201ENSMUST00000029422 Hnrnpul2Q00PI9 745 aaKnown RBP28.79■■■□□ 2.2
Shox2-201ENSMUST00000029422 Fam71e1A1L3C1 212 aa28.69■■■□□ 2.18
Shox2-201ENSMUST00000029422 Cttnbp2B9EJA2 1648 aa28.52■■■□□ 2.16
Shox2-201ENSMUST00000029422 BicraF8VPZ9 1578 aa28.51■■■□□ 2.15
Shox2-201ENSMUST00000029422 Fmn1Q05860 1466 aa28.51■■■□□ 2.15
Shox2-201ENSMUST00000029422 Top2aQ01320 1528 aaKnown RBP28.48■■■□□ 2.15
Shox2-201ENSMUST00000029422 Ncapd3Q6ZQK0 1506 aa28.48■■■□□ 2.15
Shox2-201ENSMUST00000029422 Tnnt3Q9QZ47 272 aa28.48■■■□□ 2.15
Shox2-201ENSMUST00000029422 NclP09405 707 aaKnown RBP28.29■■■□□ 2.12
Shox2-201ENSMUST00000029422 DiexfQ8BTT6 772 aaKnown RBP28.29■■■□□ 2.12
Shox2-201ENSMUST00000029422 Il27Q8K3I6 234 aa28.28■■■□□ 2.12
Shox2-201ENSMUST00000029422 Fam50aQ9WV03 339 aaKnown RBP28.23■■■□□ 2.11
Shox2-201ENSMUST00000029422 Slc24a1Q91WD8 1130 aa28.17■■■□□ 2.1
Shox2-201ENSMUST00000029422 Smarca4Q3TKT4 1613 aaKnown RBP28.16■■■□□ 2.1
Shox2-201ENSMUST00000029422 Bcl11aQ9QYE3 773 aa28.15■■■□□ 2.1
Shox2-201ENSMUST00000029422 Eea1Q8BL66 1411 aa28.11■■■□□ 2.09
Shox2-201ENSMUST00000029422 Anp32aO35381 247 aa28.1■■■□□ 2.09
Shox2-201ENSMUST00000029422 Znf710Q3U288 666 aa28.1■■■□□ 2.09
Shox2-201ENSMUST00000029422 Setd5Q5XJV7 1441 aa28.1■■■□□ 2.09
Shox2-201ENSMUST00000029422 Arap1Q4LDD4 1452 aa28.08■■■□□ 2.09
Shox2-201ENSMUST00000029422 Stra8P70278 393 aa28.05■■■□□ 2.08
Shox2-201ENSMUST00000029422 Rpap1Q80TE0 1409 aa28.03■■■□□ 2.08
Shox2-201ENSMUST00000029422 Lmod2Q3UHZ5 550 aa28.02■■■□□ 2.08
Shox2-201ENSMUST00000029422 Arhgap35Q91YM2 1499 aa28.01■■■□□ 2.07
Shox2-201ENSMUST00000029422 Eif4g1Q6NZJ6 1600 aaKnown RBP27.97■■■□□ 2.07
Shox2-201ENSMUST00000029422 PtprkP35822 1457 aa27.96■■■□□ 2.07
Shox2-201ENSMUST00000029422 Calr4Q3TQS0 420 aa27.96■■■□□ 2.07
Shox2-201ENSMUST00000029422 BlmO88700 1416 aa27.96■■■□□ 2.07
Shox2-201ENSMUST00000029422 Nolc1E9Q5C9 702 aaKnown RBP27.95■■■□□ 2.07
Shox2-201ENSMUST00000029422 Baz1bQ9Z277 1479 aa27.94■■■□□ 2.06
Retrieved 100 of 22,080 RNA–protein pairs in 6.7 ms