RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Igkv3-1A0A075B5P1 119 aa13.61□□□□□ -0.23
Ctdsp1-201ENSMUST00000027367 Igkv8-34A0A0G2JDU0 121 aa13.61□□□□□ -0.23
Ctdsp1-201ENSMUST00000027367 Gm5153P01627 120 aa13.61□□□□□ -0.23
Ctdsp1-201ENSMUST00000027367 Dnah3Q8BW94 4083 aa13.61□□□□□ -0.23
Ctdsp1-201ENSMUST00000027367 6430550D23RikE9Q1X6 194 aa13.6□□□□□ -0.23
Ctdsp1-201ENSMUST00000027367 Snhg11Q4G0K9 87 aa13.6□□□□□ -0.23
Ctdsp1-201ENSMUST00000027367 Defb10Q8R2I8 73 aa13.59□□□□□ -0.23
Ctdsp1-201ENSMUST00000027367 Trav13-1A0A075B644 110 aa13.59□□□□□ -0.23
Ctdsp1-201ENSMUST00000027367 C530025M09RikF6RGA8 229 aa13.58□□□□□ -0.24
Ctdsp1-201ENSMUST00000027367 Ormdl1Q921I0 153 aa13.58□□□□□ -0.24
Ctdsp1-201ENSMUST00000027367 Ubl5Q9EPV8 73 aa13.57□□□□□ -0.24
Ctdsp1-201ENSMUST00000027367 2010109I03RikQ9CQ11 111 aa13.57□□□□□ -0.24
Ctdsp1-201ENSMUST00000027367 Dnah6E9Q0B6 4144 aa13.56□□□□□ -0.24
Ctdsp1-201ENSMUST00000027367 Ndufc1Q9CQY9 76 aa13.56□□□□□ -0.24
Ctdsp1-201ENSMUST00000027367 Rbm3O89086 153 aaKnown RBP13.55□□□□□ -0.24
Ctdsp1-201ENSMUST00000027367 Gm10845Q3UNY9 185 aa13.55□□□□□ -0.24
Ctdsp1-201ENSMUST00000027367 Trav13n-2A0A0G2JF93 110 aa13.54□□□□□ -0.24
Ctdsp1-201ENSMUST00000027367 Trav13-2A0A075B649 110 aa13.53□□□□□ -0.24
Ctdsp1-201ENSMUST00000027367 MplkipQ9D011 178 aa13.53□□□□□ -0.24
Ctdsp1-201ENSMUST00000027367 Igkv8-24A0A140T8P5 121 aa13.53□□□□□ -0.24
Ctdsp1-201ENSMUST00000027367 Spata3Q9D9T6 193 aa13.52□□□□□ -0.24
Ctdsp1-201ENSMUST00000027367 Dnah14A0A140LIJ4 4489 aa13.52□□□□□ -0.25
Ctdsp1-201ENSMUST00000027367 Reg3bP35230 175 aa13.52□□□□□ -0.25
Ctdsp1-201ENSMUST00000027367 Vpreb2P13373 142 aa13.51□□□□□ -0.25
Ctdsp1-201ENSMUST00000027367 Ighv10-3A0A075B5T6 119 aa13.5□□□□□ -0.25
Ctdsp1-201ENSMUST00000027367 Defa28D3Z1V9 94 aa13.5□□□□□ -0.25
Ctdsp1-201ENSMUST00000027367 Gm5142Q8C5X9 133 aa13.5□□□□□ -0.25
Ctdsp1-201ENSMUST00000027367 Rpl39lQ9CQD0 51 aa13.5□□□□□ -0.25
Ctdsp1-201ENSMUST00000027367 AplnQ9R0R4 77 aa13.5□□□□□ -0.25
Ctdsp1-201ENSMUST00000027367 Gm16181B0V2H2 73 aa13.49□□□□□ -0.25
Ctdsp1-201ENSMUST00000027367 Fam19a3Q7TPG6 132 aa13.49□□□□□ -0.25
Ctdsp1-201ENSMUST00000027367 Gm9903Q8C9Y8 129 aa13.49□□□□□ -0.25
Ctdsp1-201ENSMUST00000027367 Igkv1-110A0A0B4J1I0 119 aa13.48□□□□□ -0.25
Ctdsp1-201ENSMUST00000027367 UqcrqQ9CQ69 82 aa13.47□□□□□ -0.25
Ctdsp1-201ENSMUST00000027367 Inafm2A0A1L1STD6 152 aa13.46□□□□□ -0.25
Ctdsp1-201ENSMUST00000027367 Wfdc12Q9JHY3 85 aa13.46□□□□□ -0.25
Ctdsp1-201ENSMUST00000027367 Igkv8-16A0A0G2JDG9 121 aa13.46□□□□□ -0.26
Ctdsp1-201ENSMUST00000027367 Sslp1Q3UN54 99 aa13.46□□□□□ -0.26
Ctdsp1-201ENSMUST00000027367 Igkv8-18A0A0B4J1J3 123 aa13.45□□□□□ -0.26
Ctdsp1-201ENSMUST00000027367 Gm10518F6UQQ9 182 aa13.44□□□□□ -0.26
Ctdsp1-201ENSMUST00000027367 Igkv2-109A0A075B5K6 120 aa13.44□□□□□ -0.26
Ctdsp1-201ENSMUST00000027367 Tcl1b3P56842 122 aa13.44□□□□□ -0.26
Ctdsp1-201ENSMUST00000027367 P01819 144 aa13.43□□□□□ -0.26
Ctdsp1-201ENSMUST00000027367 A930002H24RikQ8C8Y3 163 aa13.42□□□□□ -0.26
Ctdsp1-201ENSMUST00000027367 Igkv8-27A0A0G2JF28 120 aa13.42□□□□□ -0.26
Ctdsp1-201ENSMUST00000027367 Igkv8-30A0A140T8M3 121 aa13.42□□□□□ -0.26
Ctdsp1-201ENSMUST00000027367 Tcl1b5P56845 121 aa13.41□□□□□ -0.26
Ctdsp1-201ENSMUST00000027367 Ighv2-9A0A075B5Q5 116 aa13.41□□□□□ -0.26
Ctdsp1-201ENSMUST00000027367 Igsf10Q3V1M1 2594 aa13.4□□□□□ -0.26
Ctdsp1-201ENSMUST00000027367 Spink8Q09TK9 105 aa13.4□□□□□ -0.26
Ctdsp1-201ENSMUST00000027367 Reg3dQ9QUS9 175 aa13.4□□□□□ -0.26
Ctdsp1-201ENSMUST00000027367 Spint4Q9D263 159 aa13.38□□□□□ -0.27
Ctdsp1-201ENSMUST00000027367 Ighv2-5A0A0A6YY69 116 aa13.38□□□□□ -0.27
Ctdsp1-201ENSMUST00000027367 Cd164Q9R0L9 197 aa13.37□□□□□ -0.27
Ctdsp1-201ENSMUST00000027367 Gm10401E9Q3K6 71 aa13.37□□□□□ -0.27
Ctdsp1-201ENSMUST00000027367 Gm10570F6VB42 170 aa13.36□□□□□ -0.27
Ctdsp1-201ENSMUST00000027367 Cox7bP56393 80 aa13.35□□□□□ -0.27
Ctdsp1-201ENSMUST00000027367 Gm17509Q9CZ61 145 aa13.35□□□□□ -0.27
Ctdsp1-201ENSMUST00000027367 Cox7b2Q9D2H1 82 aa13.35□□□□□ -0.27
Ctdsp1-201ENSMUST00000027367 Igkv8-26A0A075B5N5 123 aa13.35□□□□□ -0.27
Ctdsp1-201ENSMUST00000027367 A730009L09RikA0A1B0GS82 72 aa13.35□□□□□ -0.27
Ctdsp1-201ENSMUST00000027367 Gm17689B3GLJ4 109 aa13.35□□□□□ -0.27
Ctdsp1-201ENSMUST00000027367 A830005F24RikQ8BRT5 167 aa13.35□□□□□ -0.27
Ctdsp1-201ENSMUST00000027367 Dnah17Q69Z23 4481 aa13.35□□□□□ -0.27
Ctdsp1-201ENSMUST00000027367 Ccdc179J3QM76 67 aa13.34□□□□□ -0.27
Ctdsp1-201ENSMUST00000027367 Dnah7bL7N1Y0 4068 aa13.34□□□□□ -0.27
Ctdsp1-201ENSMUST00000027367 A0A286YCN5 57 aa13.34□□□□□ -0.27
Ctdsp1-201ENSMUST00000027367 Ighv10-1A0A0B4J1J6 119 aa13.32□□□□□ -0.28
Ctdsp1-201ENSMUST00000027367 Ufsp1Q9CZP0 217 aa13.31□□□□□ -0.28
Ctdsp1-201ENSMUST00000027367 Igkv4-92A0A0B4J1I2 117 aa13.31□□□□□ -0.28
Ctdsp1-201ENSMUST00000027367 2310034G01RikA0A286YDL3 209 aa13.3□□□□□ -0.28
Ctdsp1-201ENSMUST00000027367 P06320 134 aa13.29□□□□□ -0.28
Ctdsp1-201ENSMUST00000027367 Klk12B2RVZ0 247 aa13.29□□□□□ -0.28
Ctdsp1-201ENSMUST00000027367 AY074887Q8R5F9 132 aa13.28□□□□□ -0.28
Ctdsp1-201ENSMUST00000027367 Gm5617Q91VN2 117 aa13.27□□□□□ -0.29
Ctdsp1-201ENSMUST00000027367 Camk2n2Q78WH7 79 aa13.26□□□□□ -0.29
Ctdsp1-201ENSMUST00000027367 Sprr4Q8CGN8 76 aa13.26□□□□□ -0.29
Ctdsp1-201ENSMUST00000027367 TnxbO35452 4006 aa13.26□□□□□ -0.29
Ctdsp1-201ENSMUST00000027367 Gm10320E9PW43 113 aa13.26□□□□□ -0.29
Ctdsp1-201ENSMUST00000027367 Gm9805F6YK59 57 aa13.26□□□□□ -0.29
Ctdsp1-201ENSMUST00000027367 Gm16485Q8C4B7 115 aa13.26□□□□□ -0.29
Ctdsp1-201ENSMUST00000027367 Dnah1E9Q8T7 4250 aa13.25□□□□□ -0.29
Ctdsp1-201ENSMUST00000027367 Q8BT88 171 aa13.22□□□□□ -0.29
Ctdsp1-201ENSMUST00000027367 Trav14-1A0A0G2JF94 121 aa13.22□□□□□ -0.29
Ctdsp1-201ENSMUST00000027367 Ighv2-2A0A075B5P8 116 aa13.21□□□□□ -0.29
Ctdsp1-201ENSMUST00000027367 P01821 116 aa13.21□□□□□ -0.29
Ctdsp1-201ENSMUST00000027367 Igkv4-58A0A0G2JGI6 119 aa13.21□□□□□ -0.3
Ctdsp1-201ENSMUST00000027367 Gm17577J3QNF7 156 aa13.2□□□□□ -0.3
Ctdsp1-201ENSMUST00000027367 E130218I03RikA0A0U1RNU5 63 aa13.19□□□□□ -0.3
Ctdsp1-201ENSMUST00000027367 Igkv1-88A0A140T8N1 120 aa13.19□□□□□ -0.3
Ctdsp1-201ENSMUST00000027367 Cdc42se1Q8BHL7 80 aa13.18□□□□□ -0.3
Ctdsp1-201ENSMUST00000027367 Igkv3-10A0A0G2JGN0 119 aa13.18□□□□□ -0.3
Ctdsp1-201ENSMUST00000027367 Gm10770F7D043 238 aa13.18□□□□□ -0.3
Ctdsp1-201ENSMUST00000027367 Pde6gP09174 87 aa13.18□□□□□ -0.3
Ctdsp1-201ENSMUST00000027367 B9d2Q3UK10 175 aa13.18□□□□□ -0.3
Ctdsp1-201ENSMUST00000027367 A730071L15RikQ8C4X0 137 aa13.17□□□□□ -0.3
Ctdsp1-201ENSMUST00000027367 AI606181Q8C7B9 129 aa13.16□□□□□ -0.3
Ctdsp1-201ENSMUST00000027367 Csmd3Q80T79 3707 aa13.15□□□□□ -0.3
Ctdsp1-201ENSMUST00000027367 Gm10197F6QEY5 67 aa13.15□□□□□ -0.3
Ctdsp1-201ENSMUST00000027367 Gm9508A0A1W2P7W0 230 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms