RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 NischQ80TM9 1593 aa40.35■■■■■ 4.05
Ctdsp1-201ENSMUST00000027367 Gm35339A0A140LHH9 1649 aa39.93■■■■□ 3.98
Ctdsp1-201ENSMUST00000027367 Abcc9P70170 1546 aa39.17■■■■□ 3.86
Ctdsp1-201ENSMUST00000027367 Abcc8B2RUS7 1588 aa38.45■■■■□ 3.75
Ctdsp1-201ENSMUST00000027367 Rhox8Q6VSS7 320 aa36.85■■■■□ 3.49
Ctdsp1-201ENSMUST00000027367 ScribQ80U72 1612 aa36.11■■■■□ 3.37
Ctdsp1-201ENSMUST00000027367 Rtl1Q7M732 1744 aa35.97■■■■□ 3.35
Ctdsp1-201ENSMUST00000027367 Dcaf1Q80TR8 1506 aa35.77■■■■□ 3.32
Ctdsp1-201ENSMUST00000027367 Rb1cc1Q9ESK9 1588 aa35.34■■■■□ 3.25
Ctdsp1-201ENSMUST00000027367 Kdm5dQ62240 1548 aa35.32■■■■□ 3.25
Ctdsp1-201ENSMUST00000027367 Ccdc180J3QNE4 1664 aa35.18■■■■□ 3.22
Ctdsp1-201ENSMUST00000027367 NacadQ5SWP3 1504 aa35.08■■■■□ 3.21
Ctdsp1-201ENSMUST00000027367 Baz1aO88379 1555 aa34.9■■■■□ 3.18
Ctdsp1-201ENSMUST00000027367 Zcchc6Q5BLK4 1491 aaKnown RBP34.84■■■■□ 3.17
Ctdsp1-201ENSMUST00000027367 Sycp2Q9CUU3 1500 aa34.33■■■■□ 3.09
Ctdsp1-201ENSMUST00000027367 Crybg2B7ZCC2 1516 aa34.31■■■■□ 3.08
Ctdsp1-201ENSMUST00000027367 Ccdc136Q3TVA9 1136 aa34.23■■■■□ 3.07
Ctdsp1-201ENSMUST00000027367 Smarca2Q6DIC0 1577 aa34.08■■■■□ 3.05
Ctdsp1-201ENSMUST00000027367 BicraF8VPZ9 1578 aa33.65■■■□□ 2.98
Ctdsp1-201ENSMUST00000027367 HrcG5E8J6 738 aa33.54■■■□□ 2.96
Ctdsp1-201ENSMUST00000027367 Trim41Q5NCC3 630 aa33.54■■■□□ 2.96
Ctdsp1-201ENSMUST00000027367 Cecr2E9Q2Z1 1453 aa33.37■■■□□ 2.93
Ctdsp1-201ENSMUST00000027367 Rpgrip1Q9EPQ2 1331 aa33.34■■■□□ 2.93
Ctdsp1-201ENSMUST00000027367 Brd4Q9ESU6 1400 aaKnown RBP33.2■■■□□ 2.91
Ctdsp1-201ENSMUST00000027367 Synj1Q8CHC4 1574 aa33.01■■■□□ 2.88
Ctdsp1-201ENSMUST00000027367 CftrP26361 1476 aa32.84■■■□□ 2.85
Ctdsp1-201ENSMUST00000027367 Cngb1E1AZ71 1325 aa32.79■■■□□ 2.84
Ctdsp1-201ENSMUST00000027367 Cep164Q5DU05 1446 aa32.77■■■□□ 2.84
Ctdsp1-201ENSMUST00000027367 Smarca4Q3TKT4 1613 aaKnown RBP32.77■■■□□ 2.84
Ctdsp1-201ENSMUST00000027367 Golga3P55937 1487 aa32.72■■■□□ 2.83
Ctdsp1-201ENSMUST00000027367 Cttnbp2B9EJA2 1648 aa32.72■■■□□ 2.83
Ctdsp1-201ENSMUST00000027367 Rsf1E9PWW9 1441 aaKnown RBP32.58■■■□□ 2.81
Ctdsp1-201ENSMUST00000027367 Esf1Q3V1V3 845 aaKnown RBP32.53■■■□□ 2.8
Ctdsp1-201ENSMUST00000027367 Chic1Q8CBW7 227 aa32.51■■■□□ 2.79
Ctdsp1-201ENSMUST00000027367 Ccdc88bQ4QRL3 1481 aa32.45■■■□□ 2.78
Ctdsp1-201ENSMUST00000027367 Top2bQ64511 1612 aa32.44■■■□□ 2.78
Ctdsp1-201ENSMUST00000027367 Iqgap2Q3UQ44 1575 aa32.38■■■□□ 2.77
Ctdsp1-201ENSMUST00000027367 Ehmt2Q9Z148 1263 aaKnown RBP32.3■■■□□ 2.76
Ctdsp1-201ENSMUST00000027367 Atad2bE9Q166 1460 aaKnown RBP32.3■■■□□ 2.76
Ctdsp1-201ENSMUST00000027367 Pds5bQ4VA53 1446 aaKnown RBP32.2■■■□□ 2.75
Ctdsp1-201ENSMUST00000027367 Cc2d2aQ8CFW7 1633 aa32.17■■■□□ 2.74
Ctdsp1-201ENSMUST00000027367 Gab3Q8BSM5 595 aa32.14■■■□□ 2.74
Ctdsp1-201ENSMUST00000027367 Acin1Q9JIX8 1338 aaKnown RBP32.04■■■□□ 2.72
Ctdsp1-201ENSMUST00000027367 Fmn1Q05860 1466 aa31.94■■■□□ 2.7
Ctdsp1-201ENSMUST00000027367 Frmpd1A2AKB4 1549 aa31.79■■■□□ 2.68
Ctdsp1-201ENSMUST00000027367 Wdr62Q3U3T8 1523 aa31.79■■■□□ 2.68
Ctdsp1-201ENSMUST00000027367 Top2aQ01320 1528 aaKnown RBP31.74■■■□□ 2.67
Ctdsp1-201ENSMUST00000027367 Pcgf6Q99NA9 353 aa31.73■■■□□ 2.67
Ctdsp1-201ENSMUST00000027367 Ercc6F8VPZ5 1481 aa31.64■■■□□ 2.66
Ctdsp1-201ENSMUST00000027367 TnnQ80Z71 1560 aa31.59■■■□□ 2.65
Ctdsp1-201ENSMUST00000027367 Rapgef2Q8CHG7 1496 aa31.55■■■□□ 2.64
Ctdsp1-201ENSMUST00000027367 Unc13aQ4KUS2 1712 aa31.5■■■□□ 2.63
Ctdsp1-201ENSMUST00000027367 Lamc3Q9R0B6 1581 aa31.41■■■□□ 2.62
Ctdsp1-201ENSMUST00000027367 Thoc2B1AZI6 1594 aaKnown RBP31.31■■■□□ 2.6
Ctdsp1-201ENSMUST00000027367 Kif15Q6P9L6 1387 aa31.3■■■□□ 2.6
Ctdsp1-201ENSMUST00000027367 Cep162Q6ZQ06 1403 aa31.3■■■□□ 2.6
Ctdsp1-201ENSMUST00000027367 Npm2Q80W85 207 aa31.18■■■□□ 2.58
Ctdsp1-201ENSMUST00000027367 Phldb1Q6PDH0 1371 aaKnown RBP31.13■■■□□ 2.57
Ctdsp1-201ENSMUST00000027367 Eif4g1Q6NZJ6 1600 aaKnown RBP31.13■■■□□ 2.57
Ctdsp1-201ENSMUST00000027367 Camsap1A2AHC3 1581 aa31.12■■■□□ 2.57
Ctdsp1-201ENSMUST00000027367 Myt1lP97500 1187 aa31.11■■■□□ 2.57
Ctdsp1-201ENSMUST00000027367 Il27Q8K3I6 234 aa31.09■■■□□ 2.57
Ctdsp1-201ENSMUST00000027367 PtprkP35822 1457 aa31.02■■■□□ 2.56
Ctdsp1-201ENSMUST00000027367 Ccdc18Q640L5 1455 aa30.96■■■□□ 2.55
Ctdsp1-201ENSMUST00000027367 NrkQ9R0G8 1455 aa30.95■■■□□ 2.54
Ctdsp1-201ENSMUST00000027367 Fam135aQ6NS59 1506 aa30.93■■■□□ 2.54
Ctdsp1-201ENSMUST00000027367 Arhgap35Q91YM2 1499 aa30.91■■■□□ 2.54
Ctdsp1-201ENSMUST00000027367 Shroom4Q1W617 1475 aa30.9■■■□□ 2.54
Ctdsp1-201ENSMUST00000027367 Ubl4bQ9CQ84 188 aa30.89■■■□□ 2.54
Ctdsp1-201ENSMUST00000027367 Cux2P70298 1426 aa30.86■■■□□ 2.53
Ctdsp1-201ENSMUST00000027367 Grin2bQ01097 1482 aa30.85■■■□□ 2.53
Ctdsp1-201ENSMUST00000027367 Mier1Q5UAK0 511 aa30.79■■■□□ 2.52
Ctdsp1-201ENSMUST00000027367 Clip1Q922J3 1391 aa30.73■■■□□ 2.51
Ctdsp1-201ENSMUST00000027367 Neurod1Q60867 357 aa30.68■■■□□ 2.5
Ctdsp1-201ENSMUST00000027367 UbtfP25976 765 aaKnown RBP30.67■■■□□ 2.5
Ctdsp1-201ENSMUST00000027367 Npm1Q61937 292 aaKnown RBP30.67■■■□□ 2.5
Ctdsp1-201ENSMUST00000027367 Map3k1P53349 1493 aa30.67■■■□□ 2.5
Ctdsp1-201ENSMUST00000027367 Supt5hO55201 1082 aaKnown RBP30.63■■■□□ 2.49
Ctdsp1-201ENSMUST00000027367 Las1lA2BE28 776 aaKnown RBP30.6■■■□□ 2.49
Ctdsp1-201ENSMUST00000027367 Mroh2bQ7M6Y6 1581 aa30.58■■■□□ 2.49
Ctdsp1-201ENSMUST00000027367 Zeb1Q64318 1117 aa30.56■■■□□ 2.48
Ctdsp1-201ENSMUST00000027367 LrpprcQ6PB66 1392 aaKnown RBP30.56■■■□□ 2.48
Ctdsp1-201ENSMUST00000027367 Baz1bQ9Z277 1479 aa30.55■■■□□ 2.48
Ctdsp1-201ENSMUST00000027367 Eea1Q8BL66 1411 aa30.52■■■□□ 2.48
Ctdsp1-201ENSMUST00000027367 PogzQ8BZH4 1409 aaKnown RBP30.5■■■□□ 2.47
Ctdsp1-201ENSMUST00000027367 Plekhg3Q4VAC9 1341 aa30.5■■■□□ 2.47
Ctdsp1-201ENSMUST00000027367 NefmP08553 848 aa30.49■■■□□ 2.47
Ctdsp1-201ENSMUST00000027367 Efcab5A0JP43 1406 aa30.49■■■□□ 2.47
Ctdsp1-201ENSMUST00000027367 Arap1Q4LDD4 1452 aa30.48■■■□□ 2.47
Ctdsp1-201ENSMUST00000027367 Duox2A2AQ99 1517 aa30.45■■■□□ 2.47
Ctdsp1-201ENSMUST00000027367 Setd5Q5XJV7 1441 aa30.42■■■□□ 2.46
Ctdsp1-201ENSMUST00000027367 AqrQ8CFQ3 1481 aaKnown RBP30.4■■■□□ 2.46
Ctdsp1-201ENSMUST00000027367 Arhgef5E9Q7D5 1581 aa30.36■■■□□ 2.45
Ctdsp1-201ENSMUST00000027367 Dhx29Q6PGC1 1365 aaKnown RBP30.34■■■□□ 2.45
Ctdsp1-201ENSMUST00000027367 Ap3b1Q9Z1T1 1105 aa30.33■■■□□ 2.45
Ctdsp1-201ENSMUST00000027367 Dnajc5bQ9CQ94 199 aa30.33■■■□□ 2.45
Ctdsp1-201ENSMUST00000027367 Ankrd26Q811D2 1581 aa30.31■■■□□ 2.44
Ctdsp1-201ENSMUST00000027367 Erich3F6QRE9 1637 aa30.3■■■□□ 2.44
Ctdsp1-201ENSMUST00000027367 Samd9lQ69Z37 1561 aa30.29■■■□□ 2.44
Ctdsp1-201ENSMUST00000027367 Mrc2Q64449 1479 aa30.28■■■□□ 2.44
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms