RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 2310034G01RikA0A286YDL3 209 aa7.56□□□□□ -1.2
Vps54-201ENSMUST00000006221 Cmc4Q61908 68 aa7.56□□□□□ -1.2
Vps54-201ENSMUST00000006221 Scgb1b2O35176 93 aa7.56□□□□□ -1.2
Vps54-201ENSMUST00000006221 A730071L15RikQ8C4X0 137 aa7.56□□□□□ -1.2
Vps54-201ENSMUST00000006221 Gm17689B3GLJ4 109 aa7.55□□□□□ -1.2
Vps54-201ENSMUST00000006221 Dnah7bL7N1Y0 4068 aa7.55□□□□□ -1.2
Vps54-201ENSMUST00000006221 Tcl1b5P56845 121 aa7.54□□□□□ -1.2
Vps54-201ENSMUST00000006221 9530003J23RikQ8BM26 151 aa7.54□□□□□ -1.2
Vps54-201ENSMUST00000006221 Ubl5Q9EPV8 73 aa7.54□□□□□ -1.2
Vps54-201ENSMUST00000006221 Dnah10D3YYQ8 4591 aa7.54□□□□□ -1.2
Vps54-201ENSMUST00000006221 Smim29Q8R043 75 aa7.54□□□□□ -1.2
Vps54-201ENSMUST00000006221 Cd164Q9R0L9 197 aa7.54□□□□□ -1.2
Vps54-201ENSMUST00000006221 Csmd3Q80T79 3707 aa7.53□□□□□ -1.2
Vps54-201ENSMUST00000006221 Reg3bP35230 175 aa7.53□□□□□ -1.2
Vps54-201ENSMUST00000006221 Defa23Q5G866 93 aa7.53□□□□□ -1.2
Vps54-201ENSMUST00000006221 Gm17509Q9CZ61 145 aa7.53□□□□□ -1.2
Vps54-201ENSMUST00000006221 Nsd1O88491 2588 aaKnown RBP7.52□□□□□ -1.2
Vps54-201ENSMUST00000006221 Gm17577J3QNF7 156 aa7.52□□□□□ -1.21
Vps54-201ENSMUST00000006221 Igkv8-34A0A0G2JDU0 121 aa7.51□□□□□ -1.21
Vps54-201ENSMUST00000006221 Cox7b2Q9D2H1 82 aa7.51□□□□□ -1.21
Vps54-201ENSMUST00000006221 Igkv1-110A0A0B4J1I0 119 aa7.51□□□□□ -1.21
Vps54-201ENSMUST00000006221 Fam19a3Q7TPG6 132 aa7.51□□□□□ -1.21
Vps54-201ENSMUST00000006221 Igkv4-92A0A0B4J1I2 117 aa7.51□□□□□ -1.21
Vps54-201ENSMUST00000006221 Dnah3Q8BW94 4083 aa7.5□□□□□ -1.21
Vps54-201ENSMUST00000006221 9430015G10RikA2ASP7 199 aa7.49□□□□□ -1.21
Vps54-201ENSMUST00000006221 Inafm2A0A1L1STD6 152 aa7.49□□□□□ -1.21
Vps54-201ENSMUST00000006221 Rbm3O89086 153 aaKnown RBP7.49□□□□□ -1.21
Vps54-201ENSMUST00000006221 Camk2n2Q78WH7 79 aa7.48□□□□□ -1.21
Vps54-201ENSMUST00000006221 Igkv8-28A0A0G2JE47 121 aa7.48□□□□□ -1.21
Vps54-201ENSMUST00000006221 Sprr4Q8CGN8 76 aa7.48□□□□□ -1.21
Vps54-201ENSMUST00000006221 Elof1P60003 83 aa7.48□□□□□ -1.21
Vps54-201ENSMUST00000006221 B230307C23RikQ8BLB2 64 aa7.48□□□□□ -1.21
Vps54-201ENSMUST00000006221 A830005F24RikQ8BRT5 167 aa7.48□□□□□ -1.21
Vps54-201ENSMUST00000006221 Ighv2-5A0A0A6YY69 116 aa7.47□□□□□ -1.21
Vps54-201ENSMUST00000006221 Igkv1-122A0A140T8M9 119 aa7.47□□□□□ -1.21
Vps54-201ENSMUST00000006221 Gm7137J3QMW1 236 aa7.47□□□□□ -1.21
Vps54-201ENSMUST00000006221 Phxr5P08399 672 aa7.47□□□□□ -1.21
Vps54-201ENSMUST00000006221 E130114P18RikF6S0S7 154 aa7.47□□□□□ -1.21
Vps54-201ENSMUST00000006221 Cdk2ap2Q9CPY4 127 aa7.45□□□□□ -1.22
Vps54-201ENSMUST00000006221 Trav14-1A0A0G2JF94 121 aa7.44□□□□□ -1.22
Vps54-201ENSMUST00000006221 Fn1P11276 2477 aaKnown RBP7.44□□□□□ -1.22
Vps54-201ENSMUST00000006221 9530053A07RikE9PVG8 2581 aa7.44□□□□□ -1.22
Vps54-201ENSMUST00000006221 Tmem258P61166 79 aa7.44□□□□□ -1.22
Vps54-201ENSMUST00000006221 A330070K13RikQ8CA53 115 aa7.44□□□□□ -1.22
Vps54-201ENSMUST00000006221 AplnQ9R0R4 77 aa7.44□□□□□ -1.22
Vps54-201ENSMUST00000006221 Gm36176A0A1W2P8D5 158 aa7.43□□□□□ -1.22
Vps54-201ENSMUST00000006221 GhrhP16043 103 aa7.43□□□□□ -1.22
Vps54-201ENSMUST00000006221 BikO70337 150 aa7.43□□□□□ -1.22
Vps54-201ENSMUST00000006221 Vpreb2P13373 142 aa7.43□□□□□ -1.22
Vps54-201ENSMUST00000006221 A0A286YE02 88 aa7.42□□□□□ -1.22
Vps54-201ENSMUST00000006221 Pou2af1Q64693 256 aa7.42□□□□□ -1.22
Vps54-201ENSMUST00000006221 BC048502Q80Y74 154 aa7.42□□□□□ -1.22
Vps54-201ENSMUST00000006221 Igkv3-2A0A075B5P0 119 aa7.41□□□□□ -1.22
Vps54-201ENSMUST00000006221 Fam168bQ80XQ8 194 aa7.4□□□□□ -1.22
Vps54-201ENSMUST00000006221 Dnah14A0A140LIJ4 4489 aa7.4□□□□□ -1.22
Vps54-201ENSMUST00000006221 Gm19935A0A1B0GSF9 52 aa7.39□□□□□ -1.23
Vps54-201ENSMUST00000006221 Pde6gP09174 87 aa7.39□□□□□ -1.23
Vps54-201ENSMUST00000006221 SnurfQ9WU12 71 aa7.39□□□□□ -1.23
Vps54-201ENSMUST00000006221 TgO08710 2766 aa7.39□□□□□ -1.23
Vps54-201ENSMUST00000006221 HrnrQ8VHD8 2496 aa7.39□□□□□ -1.23
Vps54-201ENSMUST00000006221 Rps28P62858 69 aaKnown RBP7.39□□□□□ -1.23
Vps54-201ENSMUST00000006221 Dnah6E9Q0B6 4144 aa7.38□□□□□ -1.23
Vps54-201ENSMUST00000006221 Gm7276Q3TYW4 209 aa7.38□□□□□ -1.23
Vps54-201ENSMUST00000006221 Ighv2-2A0A075B5P8 116 aa7.38□□□□□ -1.23
Vps54-201ENSMUST00000006221 P01821 116 aa7.38□□□□□ -1.23
Vps54-201ENSMUST00000006221 Gm16485Q8C4B7 115 aa7.37□□□□□ -1.23
Vps54-201ENSMUST00000006221 Megf8P60882 2789 aa7.37□□□□□ -1.23
Vps54-201ENSMUST00000006221 Brk1Q91VR8 75 aa7.36□□□□□ -1.23
Vps54-201ENSMUST00000006221 Samd13D3YUG0 102 aa7.35□□□□□ -1.23
Vps54-201ENSMUST00000006221 Sfta2E9PXB6 77 aa7.35□□□□□ -1.23
Vps54-201ENSMUST00000006221 P84750 121 aa7.34□□□□□ -1.23
Vps54-201ENSMUST00000006221 Gm11011D3Z3L9 86 aa7.34□□□□□ -1.23
Vps54-201ENSMUST00000006221 Ndufc1Q9CQY9 76 aa7.33□□□□□ -1.24
Vps54-201ENSMUST00000006221 P06320 134 aa7.33□□□□□ -1.24
Vps54-201ENSMUST00000006221 Muc6Q80T03 2850 aa7.33□□□□□ -1.24
Vps54-201ENSMUST00000006221 Dnah1E9Q8T7 4250 aa7.33□□□□□ -1.24
Vps54-201ENSMUST00000006221 Gm16181B0V2H2 73 aa7.33□□□□□ -1.24
Vps54-201ENSMUST00000006221 Gm5617Q91VN2 117 aa7.33□□□□□ -1.24
Vps54-201ENSMUST00000006221 Sprr2jO70561 109 aa7.32□□□□□ -1.24
Vps54-201ENSMUST00000006221 Cox6a2P43023 97 aa7.32□□□□□ -1.24
Vps54-201ENSMUST00000006221 Sslp1Q3UN54 99 aa7.32□□□□□ -1.24
Vps54-201ENSMUST00000006221 Prr15lQ8JZM2 100 aa7.32□□□□□ -1.24
Vps54-201ENSMUST00000006221 C130032M10RikQ8C888 123 aa7.32□□□□□ -1.24
Vps54-201ENSMUST00000006221 Fam19a5Q91WE9 132 aa7.31□□□□□ -1.24
Vps54-201ENSMUST00000006221 PscaP57096 123 aa7.31□□□□□ -1.24
Vps54-201ENSMUST00000006221 Sprr1aQ62266 144 aa7.31□□□□□ -1.24
Vps54-201ENSMUST00000006221 Dmac1Q9CQ00 111 aa7.31□□□□□ -1.24
Vps54-201ENSMUST00000006221 Defb40Q70KL2 73 aa7.3□□□□□ -1.24
Vps54-201ENSMUST00000006221 Defa27F2Z403 93 aa7.3□□□□□ -1.24
Vps54-201ENSMUST00000006221 6430550D23RikE9Q1X6 194 aa7.29□□□□□ -1.24
Vps54-201ENSMUST00000006221 Vpreb1P13372 142 aa7.29□□□□□ -1.24
Vps54-201ENSMUST00000006221 Gm44790A0A0N4SV91 103 aa7.28□□□□□ -1.24
Vps54-201ENSMUST00000006221 Wfdc6bF6ULY1 148 aa7.28□□□□□ -1.24
Vps54-201ENSMUST00000006221 Igkv3-12A0A140T8P0 119 aa7.27□□□□□ -1.25
Vps54-201ENSMUST00000006221 Q8BT88 171 aa7.27□□□□□ -1.25
Vps54-201ENSMUST00000006221 Gm11627A6PWP4 55 aa7.27□□□□□ -1.25
Vps54-201ENSMUST00000006221 Obox2E9PXV9 151 aa7.27□□□□□ -1.25
Vps54-201ENSMUST00000006221 Mrpl34Q99N91 92 aa7.27□□□□□ -1.25
Vps54-201ENSMUST00000006221 Dnah17Q69Z23 4481 aa7.27□□□□□ -1.25
Vps54-201ENSMUST00000006221 Gm37389A0A0A6YW05 95 aa7.27□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 87.3 ms