RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 NischQ80TM9 1593 aa21.5■■□□□ 1.03
Vps54-201ENSMUST00000006221 Gm35339A0A140LHH9 1649 aa20.9■□□□□ 0.94
Vps54-201ENSMUST00000006221 Abcc9P70170 1546 aa20.85■□□□□ 0.93
Vps54-201ENSMUST00000006221 Abcc8B2RUS7 1588 aa20.36■□□□□ 0.85
Vps54-201ENSMUST00000006221 Rhox8Q6VSS7 320 aa20.29■□□□□ 0.84
Vps54-201ENSMUST00000006221 Rtl1Q7M732 1744 aa19.79■□□□□ 0.76
Vps54-201ENSMUST00000006221 Ccdc180J3QNE4 1664 aa19.56■□□□□ 0.72
Vps54-201ENSMUST00000006221 Zcchc6Q5BLK4 1491 aaKnown RBP19.27■□□□□ 0.68
Vps54-201ENSMUST00000006221 ScribQ80U72 1612 aa18.93■□□□□ 0.62
Vps54-201ENSMUST00000006221 Dcaf1Q80TR8 1506 aa18.88■□□□□ 0.61
Vps54-201ENSMUST00000006221 Ccdc136Q3TVA9 1136 aa18.86■□□□□ 0.61
Vps54-201ENSMUST00000006221 Rb1cc1Q9ESK9 1588 aa18.85■□□□□ 0.61
Vps54-201ENSMUST00000006221 Rpgrip1Q9EPQ2 1331 aa18.82■□□□□ 0.6
Vps54-201ENSMUST00000006221 Ehmt2Q9Z148 1263 aaKnown RBP18.76■□□□□ 0.59
Vps54-201ENSMUST00000006221 HrcG5E8J6 738 aa18.7■□□□□ 0.58
Vps54-201ENSMUST00000006221 Acin1Q9JIX8 1338 aaKnown RBP18.64■□□□□ 0.57
Vps54-201ENSMUST00000006221 Kdm5dQ62240 1548 aa18.61■□□□□ 0.57
Vps54-201ENSMUST00000006221 Baz1aO88379 1555 aa18.6■□□□□ 0.57
Vps54-201ENSMUST00000006221 Trim41Q5NCC3 630 aa18.42■□□□□ 0.54
Vps54-201ENSMUST00000006221 NacadQ5SWP3 1504 aa18.35■□□□□ 0.53
Vps54-201ENSMUST00000006221 Smarca2Q6DIC0 1577 aa18.21■□□□□ 0.51
Vps54-201ENSMUST00000006221 Cep164Q5DU05 1446 aa18.11■□□□□ 0.49
Vps54-201ENSMUST00000006221 Crybg2B7ZCC2 1516 aa18.11■□□□□ 0.49
Vps54-201ENSMUST00000006221 Pcgf6Q99NA9 353 aa18.06■□□□□ 0.48
Vps54-201ENSMUST00000006221 Chic1Q8CBW7 227 aa17.98■□□□□ 0.47
Vps54-201ENSMUST00000006221 Sycp2Q9CUU3 1500 aa17.98■□□□□ 0.47
Vps54-201ENSMUST00000006221 Cngb1E1AZ71 1325 aa17.95■□□□□ 0.46
Vps54-201ENSMUST00000006221 Rsf1E9PWW9 1441 aaKnown RBP17.93■□□□□ 0.46
Vps54-201ENSMUST00000006221 Gab3Q8BSM5 595 aa17.91■□□□□ 0.46
Vps54-201ENSMUST00000006221 Cecr2E9Q2Z1 1453 aa17.86■□□□□ 0.45
Vps54-201ENSMUST00000006221 Ccdc88bQ4QRL3 1481 aa17.8■□□□□ 0.44
Vps54-201ENSMUST00000006221 Supt5hO55201 1082 aaKnown RBP17.78■□□□□ 0.44
Vps54-201ENSMUST00000006221 Brd4Q9ESU6 1400 aaKnown RBP17.78■□□□□ 0.44
Vps54-201ENSMUST00000006221 Golga3P55937 1487 aa17.69■□□□□ 0.42
Vps54-201ENSMUST00000006221 Synj1Q8CHC4 1574 aa17.69■□□□□ 0.42
Vps54-201ENSMUST00000006221 BicraF8VPZ9 1578 aa17.62■□□□□ 0.41
Vps54-201ENSMUST00000006221 Esf1Q3V1V3 845 aaKnown RBP17.57■□□□□ 0.4
Vps54-201ENSMUST00000006221 Mier1Q5UAK0 511 aa17.55■□□□□ 0.4
Vps54-201ENSMUST00000006221 Zeb1Q64318 1117 aa17.55■□□□□ 0.4
Vps54-201ENSMUST00000006221 CftrP26361 1476 aa17.54■□□□□ 0.4
Vps54-201ENSMUST00000006221 Top2bQ64511 1612 aa17.43■□□□□ 0.38
Vps54-201ENSMUST00000006221 NefmP08553 848 aa17.4■□□□□ 0.38
Vps54-201ENSMUST00000006221 Neurod1Q60867 357 aa17.36■□□□□ 0.37
Vps54-201ENSMUST00000006221 Cttnbp2B9EJA2 1648 aa17.34■□□□□ 0.37
Vps54-201ENSMUST00000006221 Cc2d2aQ8CFW7 1633 aa17.34■□□□□ 0.37
Vps54-201ENSMUST00000006221 Sall2Q9QX96 1004 aa17.3■□□□□ 0.36
Vps54-201ENSMUST00000006221 UbtfP25976 765 aaKnown RBP17.28■□□□□ 0.36
Vps54-201ENSMUST00000006221 Smarca4Q3TKT4 1613 aaKnown RBP17.23■□□□□ 0.35
Vps54-201ENSMUST00000006221 Rapgef2Q8CHG7 1496 aa17.23■□□□□ 0.35
Vps54-201ENSMUST00000006221 Myt1lP97500 1187 aa17.18■□□□□ 0.34
Vps54-201ENSMUST00000006221 Fmn1Q05860 1466 aa17.15■□□□□ 0.34
Vps54-201ENSMUST00000006221 Top2aQ01320 1528 aaKnown RBP17.14■□□□□ 0.33
Vps54-201ENSMUST00000006221 Cep162Q6ZQ06 1403 aa17.12■□□□□ 0.33
Vps54-201ENSMUST00000006221 Aebp2Q9Z248 504 aaKnown RBP17.1■□□□□ 0.33
Vps54-201ENSMUST00000006221 Npm2Q80W85 207 aa17.03■□□□□ 0.32
Vps54-201ENSMUST00000006221 Wdr66E9Q743 1299 aa17.02■□□□□ 0.31
Vps54-201ENSMUST00000006221 Iqgap2Q3UQ44 1575 aa17.01■□□□□ 0.31
Vps54-201ENSMUST00000006221 Ppargc1bQ8VHJ7 1014 aa16.99■□□□□ 0.31
Vps54-201ENSMUST00000006221 Plekhg3Q4VAC9 1341 aa16.98■□□□□ 0.31
Vps54-201ENSMUST00000006221 Las1lA2BE28 776 aaKnown RBP16.97■□□□□ 0.31
Vps54-201ENSMUST00000006221 Clip1Q922J3 1391 aa16.92■□□□□ 0.3
Vps54-201ENSMUST00000006221 Eif4g1Q6NZJ6 1600 aaKnown RBP16.89■□□□□ 0.29
Vps54-201ENSMUST00000006221 Anks4bQ8K3X6 423 aa16.84■□□□□ 0.29
Vps54-201ENSMUST00000006221 ClspnQ80YR7 1315 aa16.84■□□□□ 0.29
Vps54-201ENSMUST00000006221 Atad2bE9Q166 1460 aaKnown RBP16.83■□□□□ 0.28
Vps54-201ENSMUST00000006221 TonslQ6NZL6 1363 aa16.82■□□□□ 0.28
Vps54-201ENSMUST00000006221 PtprkP35822 1457 aa16.81■□□□□ 0.28
Vps54-201ENSMUST00000006221 Csrnp3P59055 597 aa16.79■□□□□ 0.28
Vps54-201ENSMUST00000006221 Ncapd3Q6ZQK0 1506 aa16.78■□□□□ 0.28
Vps54-201ENSMUST00000006221 TnnQ80Z71 1560 aa16.78■□□□□ 0.28
Vps54-201ENSMUST00000006221 Arhgap35Q91YM2 1499 aa16.78■□□□□ 0.28
Vps54-201ENSMUST00000006221 Il27Q8K3I6 234 aa16.76■□□□□ 0.27
Vps54-201ENSMUST00000006221 Ap3b1Q9Z1T1 1105 aa16.75■□□□□ 0.27
Vps54-201ENSMUST00000006221 Nop58Q6DFW4 536 aaKnown RBP16.75■□□□□ 0.27
Vps54-201ENSMUST00000006221 Cdk11bP24788 784 aaKnown RBP16.73■□□□□ 0.27
Vps54-201ENSMUST00000006221 1700123L14RikQ3V2K7 440 aa16.72■□□□□ 0.27
Vps54-201ENSMUST00000006221 Arap1Q4LDD4 1452 aa16.71■□□□□ 0.27
Vps54-201ENSMUST00000006221 Frmpd1A2AKB4 1549 aa16.68■□□□□ 0.26
Vps54-201ENSMUST00000006221 Pds5bQ4VA53 1446 aaKnown RBP16.68■□□□□ 0.26
Vps54-201ENSMUST00000006221 Eid3Q3V124 375 aa16.67■□□□□ 0.26
Vps54-201ENSMUST00000006221 NrkQ9R0G8 1455 aa16.66■□□□□ 0.26
Vps54-201ENSMUST00000006221 Eea1Q8BL66 1411 aa16.66■□□□□ 0.26
Vps54-201ENSMUST00000006221 Kif15Q6P9L6 1387 aa16.62■□□□□ 0.25
Vps54-201ENSMUST00000006221 Setd5Q5XJV7 1441 aa16.62■□□□□ 0.25
Vps54-201ENSMUST00000006221 Wdr62Q3U3T8 1523 aa16.61■□□□□ 0.25
Vps54-201ENSMUST00000006221 Lamc3Q9R0B6 1581 aa16.59■□□□□ 0.25
Vps54-201ENSMUST00000006221 Arhgef5E9Q7D5 1581 aa16.59■□□□□ 0.25
Vps54-201ENSMUST00000006221 Kdm5bQ80Y84 1544 aa16.57■□□□□ 0.24
Vps54-201ENSMUST00000006221 Shroom4Q1W617 1475 aa16.57■□□□□ 0.24
Vps54-201ENSMUST00000006221 Camsap1A2AHC3 1581 aa16.53■□□□□ 0.24
Vps54-201ENSMUST00000006221 Ccdc18Q640L5 1455 aa16.51■□□□□ 0.23
Vps54-201ENSMUST00000006221 AqrQ8CFQ3 1481 aaKnown RBP16.51■□□□□ 0.23
Vps54-201ENSMUST00000006221 Map3k1P53349 1493 aa16.48■□□□□ 0.23
Vps54-201ENSMUST00000006221 Unc13aQ4KUS2 1712 aa16.48■□□□□ 0.23
Vps54-201ENSMUST00000006221 Gm38655A0A286YDK6 273 aa16.47■□□□□ 0.23
Vps54-201ENSMUST00000006221 Tiam1Q60610 1591 aa16.47■□□□□ 0.23
Vps54-201ENSMUST00000006221 BlmO88700 1416 aa16.46■□□□□ 0.23
Vps54-201ENSMUST00000006221 Naip1Q9QWK5 1403 aa16.46■□□□□ 0.22
Vps54-201ENSMUST00000006221 Grin2bQ01097 1482 aa16.45■□□□□ 0.22
Vps54-201ENSMUST00000006221 Mroh2bQ7M6Y6 1581 aa16.45■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 127.8 ms