RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Igkv8-34A0A0G2JDU0 121 aa9.72□□□□□ -0.85
Ssr1-204ENSMUST00000225319 Igkv1-117A0A140T8M0 119 aa9.72□□□□□ -0.85
Ssr1-204ENSMUST00000225319 Igkv3-9A0A140T8P4 119 aa9.71□□□□□ -0.85
Ssr1-204ENSMUST00000225319 Gm16381A0A1Y7VKT9 73 aa9.71□□□□□ -0.85
Ssr1-204ENSMUST00000225319 Tcl1b3P56842 122 aa9.71□□□□□ -0.85
Ssr1-204ENSMUST00000225319 B230359F08RikA0A0B4J1K3 109 aa9.71□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Smim26Q3V460 107 aa9.71□□□□□ -0.86
Ssr1-204ENSMUST00000225319 4930524J08RikQ9CUJ5 163 aa9.7□□□□□ -0.86
Ssr1-204ENSMUST00000225319 AplnQ9R0R4 77 aa9.7□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Igkv6-13A0A0G2JGY3 119 aa9.69□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Pglyrp4Q0VB07 374 aa9.69□□□□□ -0.86
Ssr1-204ENSMUST00000225319 5730596B20RikQ8BQ08 205 aa9.69□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Snhg11Q4G0K9 87 aa9.68□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Bles03Q8VD62 251 aa9.68□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Ighv1-56A0A0A6YXG2 117 aa9.67□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Xcl1P47993 114 aa9.67□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Sslp1Q3UN54 99 aa9.67□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Dnal4Q9DCM4 105 aa9.67□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Trav13-1A0A075B644 110 aa9.67□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Trav9n-4A0A075B631 113 aa9.66□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Tmem86bQ497J1 226 aa9.66□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Dnah17Q69Z23 4481 aa9.66□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Gm10251J3QPM5 127 aa9.65□□□□□ -0.86
Ssr1-204ENSMUST00000225319 E130208F15RikQ3UPV3 143 aa9.65□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Defb29Q8BGW9 78 aa9.65□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Prss58Q8BW11 241 aa9.65□□□□□ -0.86
Ssr1-204ENSMUST00000225319 Gm867A0A1W2P7T4 151 aa9.64□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Gm17349F7BGH6 99 aa9.64□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Trav14d-3-dv8A0A075B619 120 aa9.64□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Igkv1-35A0A0G2JDE5 120 aa9.64□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Tcl1b5P56845 121 aa9.64□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Csdc2Q91YQ3 154 aa9.63□□□□□ -0.87
Ssr1-204ENSMUST00000225319 FcgbpE9Q0B5 2583 aa9.63□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Trav3-4A0A075B654 114 aa9.62□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Igkv8-18A0A0B4J1J3 123 aa9.62□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Gm5153P01627 120 aa9.62□□□□□ -0.87
Ssr1-204ENSMUST00000225319 2010109I03RikQ9CQ11 111 aa9.62□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Gm5142Q8C5X9 133 aa9.61□□□□□ -0.87
Ssr1-204ENSMUST00000225319 EnhoQ8K1D8 76 aa9.61□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Igkv3-1A0A075B5P1 119 aa9.6□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Gm11213A0A1B0GR83 88 aa9.6□□□□□ -0.87
Ssr1-204ENSMUST00000225319 C530025M09RikF6RGA8 229 aa9.6□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Ighv2-9A0A075B5Q5 116 aa9.6□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Prr13Q9CQJ5 137 aa9.6□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Krtap11-1E9Q2E9 183 aa9.59□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Reg3bP35230 175 aa9.59□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Gm9903Q8C9Y8 129 aa9.59□□□□□ -0.87
Ssr1-204ENSMUST00000225319 Defb11Q8R2I7 77 aa9.59□□□□□ -0.87
Ssr1-204ENSMUST00000225319 1810062G17RikG3X8Y2 129 aa9.58□□□□□ -0.88
Ssr1-204ENSMUST00000225319 P01819 144 aa9.58□□□□□ -0.88
Ssr1-204ENSMUST00000225319 Trav13n-2A0A0G2JF93 110 aa9.57□□□□□ -0.88
Ssr1-204ENSMUST00000225319 Cox7bP56393 80 aa9.57□□□□□ -0.88
Ssr1-204ENSMUST00000225319 4930556J24RikQ9D4U7 146 aa9.57□□□□□ -0.88
Ssr1-204ENSMUST00000225319 Prh1P05142 261 aa9.56□□□□□ -0.88
Ssr1-204ENSMUST00000225319 Gm5617Q91VN2 117 aa9.56□□□□□ -0.88
Ssr1-204ENSMUST00000225319 Dnah1E9Q8T7 4250 aa9.56□□□□□ -0.88
Ssr1-204ENSMUST00000225319 Rpl39lQ9CQD0 51 aa9.56□□□□□ -0.88
Ssr1-204ENSMUST00000225319 Trav13-2A0A075B649 110 aa9.55□□□□□ -0.88
Ssr1-204ENSMUST00000225319 BB014433Q8C5R5 389 aa9.55□□□□□ -0.88
Ssr1-204ENSMUST00000225319 CnbpP53996 178 aaKnown RBP9.54□□□□□ -0.88
Ssr1-204ENSMUST00000225319 Gm10845Q3UNY9 185 aa9.54□□□□□ -0.88
Ssr1-204ENSMUST00000225319 Igkv8-24A0A140T8P5 121 aa9.53□□□□□ -0.88
Ssr1-204ENSMUST00000225319 Ifitm6A0A1B0GS75 124 aa9.53□□□□□ -0.88
Ssr1-204ENSMUST00000225319 Defa2P28309 93 aa9.53□□□□□ -0.88
Ssr1-204ENSMUST00000225319 Dync2h1Q45VK7 4306 aa9.52□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Gm10518F6UQQ9 182 aa9.52□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Hbb-b2P02089 147 aa9.52□□□□□ -0.89
Ssr1-204ENSMUST00000225319 MifP34884 115 aaKnown RBP9.52□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Huwe1Q7TMY8 4377 aaKnown RBP9.51□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Igkv8-16A0A0G2JDG9 121 aa9.51□□□□□ -0.89
Ssr1-204ENSMUST00000225319 4930519P11RikQ9CUJ8 166 aa9.49□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Reg3dQ9QUS9 175 aa9.49□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Gm7102J3QQ10 178 aa9.49□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Csmd3Q80T79 3707 aa9.48□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Ighv10-3A0A075B5T6 119 aa9.48□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Ube2d4D3YUH6 135 aa9.48□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Ntn5Q3UQ22 452 aa9.48□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Gm17509Q9CZ61 145 aa9.48□□□□□ -0.89
Ssr1-204ENSMUST00000225319 2310061N02RikQ9D6S9 174 aa9.48□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Gm28539A0A087WSL9 92 aa9.47□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Ighv13-2A0A0A6YWN3 119 aa9.47□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Ighv10-1A0A0B4J1J6 119 aa9.47□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Gm10735Q3US96 136 aa9.47□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Mrpl52Q9D0Y8 121 aa9.47□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Dnah7bL7N1Y0 4068 aa9.47□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Gm9805F6YK59 57 aa9.46□□□□□ -0.89
Ssr1-204ENSMUST00000225319 Pkd1l1Q8R526 2615 aa9.46□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Stab2Q8R4U0 2559 aa9.45□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Igkv4-92A0A0B4J1I2 117 aa9.45□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Klk12B2RVZ0 247 aa9.45□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Wfdc12Q9JHY3 85 aa9.45□□□□□ -0.9
Ssr1-204ENSMUST00000225319 9430015G10RikA2ASP7 199 aa9.44□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Igf1P05017 153 aa9.44□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Q9DAA7 145 aa9.44□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Igkv2-109A0A075B5K6 120 aa9.43□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Gm9508A0A1W2P7W0 230 aa9.43□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Gm10770F7D043 238 aa9.43□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Gm16485Q8C4B7 115 aa9.43□□□□□ -0.9
Ssr1-204ENSMUST00000225319 AY074887Q8R5F9 132 aa9.43□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Cox7b2Q9D2H1 82 aa9.43□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms