RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 BikO70337 150 aa4.34□□□□□ -1.72
Lig4-202ENSMUST00000170033 Defb50Q6TU36 73 aa4.34□□□□□ -1.72
Lig4-202ENSMUST00000170033 Defb11Q8R2I7 77 aa4.34□□□□□ -1.72
Lig4-202ENSMUST00000170033 Ankrd17Q99NH0 2603 aaKnown RBP4.34□□□□□ -1.72
Lig4-202ENSMUST00000170033 Akap6E9Q9K8 2307 aa4.33□□□□□ -1.72
Lig4-202ENSMUST00000170033 PrlhG3UWC3 86 aa4.33□□□□□ -1.72
Lig4-202ENSMUST00000170033 Gm9821Q8K076 103 aa4.33□□□□□ -1.72
Lig4-202ENSMUST00000170033 Sostdc1Q9CQN4 206 aa4.33□□□□□ -1.72
Lig4-202ENSMUST00000170033 SelenowP63300 88 aa4.33□□□□□ -1.72
Lig4-202ENSMUST00000170033 Gm16485Q8C4B7 115 aa4.33□□□□□ -1.72
Lig4-202ENSMUST00000170033 Gm20730A0A075B5J6 119 aa4.32□□□□□ -1.72
Lig4-202ENSMUST00000170033 Igkv6-13A0A0G2JGY3 119 aa4.32□□□□□ -1.72
Lig4-202ENSMUST00000170033 Ighv1-59A0A0A6YXE0 117 aa4.32□□□□□ -1.72
Lig4-202ENSMUST00000170033 P01821 116 aa4.32□□□□□ -1.72
Lig4-202ENSMUST00000170033 Defb2P82020 71 aa4.32□□□□□ -1.72
Lig4-202ENSMUST00000170033 Ly6hQ9WUC3 139 aa4.32□□□□□ -1.72
Lig4-202ENSMUST00000170033 Ighv1-49A0A0A6YWX2 117 aa4.32□□□□□ -1.72
Lig4-202ENSMUST00000170033 Ufsp1Q9CZP0 217 aa4.32□□□□□ -1.72
Lig4-202ENSMUST00000170033 Ly6c2P0CW03 131 aa4.31□□□□□ -1.72
Lig4-202ENSMUST00000170033 Cox6b1P56391 86 aaKnown RBP4.31□□□□□ -1.72
Lig4-202ENSMUST00000170033 Vmo1Q5SXG7 201 aa4.31□□□□□ -1.72
Lig4-202ENSMUST00000170033 Sptbn4E9PX29 2561 aa4.31□□□□□ -1.72
Lig4-202ENSMUST00000170033 Armcx4E9PWM3 2356 aa4.31□□□□□ -1.72
Lig4-202ENSMUST00000170033 Fam19a3Q7TPG6 132 aa4.31□□□□□ -1.72
Lig4-202ENSMUST00000170033 AcacbE9Q4Z2 2448 aa4.31□□□□□ -1.72
Lig4-202ENSMUST00000170033 Chd9Q8BYH8 2885 aa4.3□□□□□ -1.72
Lig4-202ENSMUST00000170033 Mp68P56379 58 aa4.3□□□□□ -1.72
Lig4-202ENSMUST00000170033 NbasE9Q411 2356 aa4.3□□□□□ -1.72
Lig4-202ENSMUST00000170033 Igkv3-7A0A0G2JE31 119 aa4.3□□□□□ -1.72
Lig4-202ENSMUST00000170033 Defb26Q30KN7 186 aa4.3□□□□□ -1.72
Lig4-202ENSMUST00000170033 Dnal4Q9DCM4 105 aa4.3□□□□□ -1.72
Lig4-202ENSMUST00000170033 Adgrg4B7ZCC9 3073 aa4.3□□□□□ -1.72
Lig4-202ENSMUST00000170033 Gm5617Q91VN2 117 aa4.3□□□□□ -1.72
Lig4-202ENSMUST00000170033 4930524J08RikQ9CUJ5 163 aa4.3□□□□□ -1.72
Lig4-202ENSMUST00000170033 Col6a4A2AX52 2309 aa4.3□□□□□ -1.72
Lig4-202ENSMUST00000170033 Ep300B2RWS6 2412 aa4.29□□□□□ -1.72
Lig4-202ENSMUST00000170033 Trav9d-3A0A075B695 113 aa4.29□□□□□ -1.72
Lig4-202ENSMUST00000170033 D730001G18RikA0A087WQU7 115 aa4.29□□□□□ -1.72
Lig4-202ENSMUST00000170033 Gm9767G3X930 207 aa4.29□□□□□ -1.72
Lig4-202ENSMUST00000170033 Sec61bQ9CQS8 96 aaKnown RBP4.29□□□□□ -1.72
Lig4-202ENSMUST00000170033 Pla2g1bQ9Z0Y2 146 aa4.29□□□□□ -1.72
Lig4-202ENSMUST00000170033 Ighv2-5A0A0A6YY69 116 aa4.29□□□□□ -1.72
Lig4-202ENSMUST00000170033 Igkv3-3A0A140T8Q0 119 aa4.29□□□□□ -1.72
Lig4-202ENSMUST00000170033 Ndufa12Q7TMF3 145 aaKnown RBP4.29□□□□□ -1.72
Lig4-202ENSMUST00000170033 OtogO55225 2910 aa4.29□□□□□ -1.72
Lig4-202ENSMUST00000170033 Igkv4-54A0A0G2JES9 117 aa4.28□□□□□ -1.72
Lig4-202ENSMUST00000170033 Cox7bP56393 80 aa4.28□□□□□ -1.72
Lig4-202ENSMUST00000170033 Igkv3-10A0A0G2JGN0 119 aa4.28□□□□□ -1.72
Lig4-202ENSMUST00000170033 E130208F15RikQ3UPV3 143 aa4.28□□□□□ -1.72
Lig4-202ENSMUST00000170033 EnhoQ8K1D8 76 aa4.28□□□□□ -1.72
Lig4-202ENSMUST00000170033 Svep1A2AVA0 3567 aa4.27□□□□□ -1.73
Lig4-202ENSMUST00000170033 Trav9d-4A0A0G2JG37 103 aa4.27□□□□□ -1.73
Lig4-202ENSMUST00000170033 Ighv8-13A0A075B5Y0 101 aa4.27□□□□□ -1.73
Lig4-202ENSMUST00000170033 Igkv8-18A0A0B4J1J3 123 aa4.27□□□□□ -1.73
Lig4-202ENSMUST00000170033 Igkv1-35A0A0G2JDE5 120 aa4.27□□□□□ -1.73
Lig4-202ENSMUST00000170033 Igkv4-53A0A0G2JFC6 119 aa4.27□□□□□ -1.73
Lig4-202ENSMUST00000170033 Igkv3-9A0A140T8P4 119 aa4.27□□□□□ -1.73
Lig4-202ENSMUST00000170033 Krtap24-1G3X9A2 248 aa4.27□□□□□ -1.73
Lig4-202ENSMUST00000170033 Pde6gP09174 87 aa4.27□□□□□ -1.73
Lig4-202ENSMUST00000170033 9530003J23RikQ8BM26 151 aa4.27□□□□□ -1.73
Lig4-202ENSMUST00000170033 Ank2Q8C8R3 3898 aa4.27□□□□□ -1.73
Lig4-202ENSMUST00000170033 Abca2P41234 2434 aa4.27□□□□□ -1.73
Lig4-202ENSMUST00000170033 Spink8Q09TK9 105 aa4.26□□□□□ -1.73
Lig4-202ENSMUST00000170033 2310034C09RikQ9D746 214 aa4.26□□□□□ -1.73
Lig4-202ENSMUST00000170033 2010109I03RikQ9CQ11 111 aa4.26□□□□□ -1.73
Lig4-202ENSMUST00000170033 Trav9n-4A0A075B631 113 aa4.25□□□□□ -1.73
Lig4-202ENSMUST00000170033 Igkv1-117A0A140T8M0 119 aa4.25□□□□□ -1.73
Lig4-202ENSMUST00000170033 Spink1P09036 80 aa4.25□□□□□ -1.73
Lig4-202ENSMUST00000170033 4933415A04RikQ9D443 101 aa4.25□□□□□ -1.73
Lig4-202ENSMUST00000170033 P01755 137 aa4.25□□□□□ -1.73
Lig4-202ENSMUST00000170033 Gm11939A2A592 99 aa4.24□□□□□ -1.73
Lig4-202ENSMUST00000170033 Gm10845Q3UNY9 185 aa4.24□□□□□ -1.73
Lig4-202ENSMUST00000170033 Gm10647E9Q8X0 124 aa4.24□□□□□ -1.73
Lig4-202ENSMUST00000170033 Igkv1-99F6XWB2 120 aa4.24□□□□□ -1.73
Lig4-202ENSMUST00000170033 PrcdQ00LT2 53 aa4.24□□□□□ -1.73
Lig4-202ENSMUST00000170033 Mapk1ip1lQ8BH93 242 aa4.24□□□□□ -1.73
Lig4-202ENSMUST00000170033 Gm5142Q8C5X9 133 aa4.24□□□□□ -1.73
Lig4-202ENSMUST00000170033 Trbv13-2A0A140T8N6 113 aa4.24□□□□□ -1.73
Lig4-202ENSMUST00000170033 Defb29Q8BGW9 78 aa4.24□□□□□ -1.73
Lig4-202ENSMUST00000170033 1810062G17RikG3X8Y2 129 aa4.23□□□□□ -1.73
Lig4-202ENSMUST00000170033 Utp20Q5XG71 2788 aaKnown RBP4.23□□□□□ -1.73
Lig4-202ENSMUST00000170033 Gm10308Q9CVR5 141 aa4.23□□□□□ -1.73
Lig4-202ENSMUST00000170033 Tomm7Q9D173 55 aa4.23□□□□□ -1.73
Lig4-202ENSMUST00000170033 Igkv4-92A0A0B4J1I2 117 aa4.23□□□□□ -1.73
Lig4-202ENSMUST00000170033 Gm10770F7D043 238 aa4.23□□□□□ -1.73
Lig4-202ENSMUST00000170033 Helz2E9QAM5 2947 aaKnown RBP4.23□□□□□ -1.73
Lig4-202ENSMUST00000170033 BC067074F6RXI4 2391 aa4.22□□□□□ -1.73
Lig4-202ENSMUST00000170033 Phxr5P08399 672 aa4.22□□□□□ -1.73
Lig4-202ENSMUST00000170033 Ndufc1Q9CQY9 76 aa4.22□□□□□ -1.73
Lig4-202ENSMUST00000170033 Gm17509Q9CZ61 145 aa4.22□□□□□ -1.73
Lig4-202ENSMUST00000170033 Usp24B1AY13 2617 aaKnown RBP4.22□□□□□ -1.73
Lig4-202ENSMUST00000170033 Ash1lQ99MY8 2958 aa4.21□□□□□ -1.73
Lig4-202ENSMUST00000170033 Gm10570F6VB42 170 aa4.21□□□□□ -1.74
Lig4-202ENSMUST00000170033 Vpreb2P13373 142 aa4.21□□□□□ -1.74
Lig4-202ENSMUST00000170033 Ube2bP63147 152 aa4.21□□□□□ -1.74
Lig4-202ENSMUST00000170033 Ormdl1Q921I0 153 aa4.21□□□□□ -1.74
Lig4-202ENSMUST00000170033 Itpr1P11881 2749 aa4.21□□□□□ -1.74
Lig4-202ENSMUST00000170033 Klk12B2RVZ0 247 aa4.21□□□□□ -1.74
Lig4-202ENSMUST00000170033 LrbaQ9ESE1 2856 aa4.21□□□□□ -1.74
Lig4-202ENSMUST00000170033 Igkv1-110A0A0B4J1I0 119 aa4.2□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 56.4 ms