RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Tmem223Q9CQE2 199 aaKnown RBP12.66□□□□□ -0.38
Trim47-202ENSMUST00000106441 Zfp951A0A087WRH0 451 aa12.66□□□□□ -0.38
Trim47-202ENSMUST00000106441 Smim26Q3V460 107 aa12.66□□□□□ -0.38
Trim47-202ENSMUST00000106441 Pla2g1bQ9Z0Y2 146 aa12.66□□□□□ -0.38
Trim47-202ENSMUST00000106441 Gm3618D3Z4P5 127 aa12.65□□□□□ -0.38
Trim47-202ENSMUST00000106441 Tomm7Q9D173 55 aa12.65□□□□□ -0.38
Trim47-202ENSMUST00000106441 Gm2916Q9D9B9 127 aa12.65□□□□□ -0.38
Trim47-202ENSMUST00000106441 Sprr1bQ62267 153 aa12.64□□□□□ -0.39
Trim47-202ENSMUST00000106441 VwfQ8CIZ8 2813 aa12.63□□□□□ -0.39
Trim47-202ENSMUST00000106441 Hbb-b2P02089 147 aa12.63□□□□□ -0.39
Trim47-202ENSMUST00000106441 Odf3l2Q3TZ65 277 aa12.63□□□□□ -0.39
Trim47-202ENSMUST00000106441 Defb29Q8BGW9 78 aa12.63□□□□□ -0.39
Trim47-202ENSMUST00000106441 Igkv1-35A0A0G2JDE5 120 aa12.63□□□□□ -0.39
Trim47-202ENSMUST00000106441 Krtap16-1A2A5X5 502 aa12.63□□□□□ -0.39
Trim47-202ENSMUST00000106441 Tcl1b3P56842 122 aa12.63□□□□□ -0.39
Trim47-202ENSMUST00000106441 Serp2Q6TAW2 65 aa12.63□□□□□ -0.39
Trim47-202ENSMUST00000106441 B230359F08RikA0A0B4J1K3 109 aa12.62□□□□□ -0.39
Trim47-202ENSMUST00000106441 Dand5Q76LW6 185 aa12.62□□□□□ -0.39
Trim47-202ENSMUST00000106441 Igkv1-99F6XWB2 120 aa12.61□□□□□ -0.39
Trim47-202ENSMUST00000106441 Gm7257D3YX25 99 aa12.6□□□□□ -0.39
Trim47-202ENSMUST00000106441 Tmem258P61166 79 aa12.6□□□□□ -0.39
Trim47-202ENSMUST00000106441 Gm20726G3UX18 150 aa12.59□□□□□ -0.39
Trim47-202ENSMUST00000106441 Igkv6-13A0A0G2JGY3 119 aa12.59□□□□□ -0.39
Trim47-202ENSMUST00000106441 Gm19935A0A1B0GSF9 52 aa12.59□□□□□ -0.39
Trim47-202ENSMUST00000106441 4930518I15RikQ3V2W7 57 aa12.59□□□□□ -0.39
Trim47-202ENSMUST00000106441 Dnah6E9Q0B6 4144 aa12.58□□□□□ -0.4
Trim47-202ENSMUST00000106441 Tmem254aP0DN89 123 aa12.58□□□□□ -0.4
Trim47-202ENSMUST00000106441 Tmem254bP0DN90 123 aa12.58□□□□□ -0.4
Trim47-202ENSMUST00000106441 Tmem254cP0DN91 123 aa12.58□□□□□ -0.4
Trim47-202ENSMUST00000106441 Igkv4-53A0A0G2JFC6 119 aa12.57□□□□□ -0.4
Trim47-202ENSMUST00000106441 Ifitm6A0A1B0GS75 124 aa12.57□□□□□ -0.4
Trim47-202ENSMUST00000106441 B9d2Q3UK10 175 aa12.57□□□□□ -0.4
Trim47-202ENSMUST00000106441 Mrpl52Q9D0Y8 121 aa12.57□□□□□ -0.4
Trim47-202ENSMUST00000106441 6430550D23RikE9Q1X6 194 aa12.56□□□□□ -0.4
Trim47-202ENSMUST00000106441 Cmc4Q61908 68 aa12.56□□□□□ -0.4
Trim47-202ENSMUST00000106441 Q8R092 253 aa12.56□□□□□ -0.4
Trim47-202ENSMUST00000106441 Igkv4-61A0A0G2JH00 117 aa12.56□□□□□ -0.4
Trim47-202ENSMUST00000106441 Bles03Q8VD62 251 aa12.56□□□□□ -0.4
Trim47-202ENSMUST00000106441 Phxr5P08399 672 aa12.55□□□□□ -0.4
Trim47-202ENSMUST00000106441 Defa4P28311 92 aa12.55□□□□□ -0.4
Trim47-202ENSMUST00000106441 Gm5142Q8C5X9 133 aa12.55□□□□□ -0.4
Trim47-202ENSMUST00000106441 MifP34884 115 aaKnown RBP12.54□□□□□ -0.4
Trim47-202ENSMUST00000106441 Gm4707V9GXN5 68 aa12.53□□□□□ -0.4
Trim47-202ENSMUST00000106441 Klk9Q32M27 251 aa12.53□□□□□ -0.4
Trim47-202ENSMUST00000106441 Trav13-1A0A075B644 110 aa12.52□□□□□ -0.4
Trim47-202ENSMUST00000106441 Ighv1-59A0A0A6YXE0 117 aa12.52□□□□□ -0.41
Trim47-202ENSMUST00000106441 Igkv8-18A0A0B4J1J3 123 aa12.52□□□□□ -0.41
Trim47-202ENSMUST00000106441 Samd13D3YUG0 102 aa12.52□□□□□ -0.41
Trim47-202ENSMUST00000106441 Defa7P50705 93 aa12.52□□□□□ -0.41
Trim47-202ENSMUST00000106441 Defb11Q8R2I7 77 aa12.52□□□□□ -0.41
Trim47-202ENSMUST00000106441 Igkv4-54A0A0G2JES9 117 aa12.51□□□□□ -0.41
Trim47-202ENSMUST00000106441 Trav13n-2A0A0G2JF93 110 aa12.5□□□□□ -0.41
Trim47-202ENSMUST00000106441 Gm10845Q3UNY9 185 aa12.5□□□□□ -0.41
Trim47-202ENSMUST00000106441 Megf8P60882 2789 aa12.5□□□□□ -0.41
Trim47-202ENSMUST00000106441 Gm5153P01627 120 aa12.5□□□□□ -0.41
Trim47-202ENSMUST00000106441 Tmem86bQ497J1 226 aa12.5□□□□□ -0.41
Trim47-202ENSMUST00000106441 Cystm1Q8K353 104 aa12.5□□□□□ -0.41
Trim47-202ENSMUST00000106441 P01819 144 aa12.49□□□□□ -0.41
Trim47-202ENSMUST00000106441 Inafm2A0A1L1STD6 152 aa12.49□□□□□ -0.41
Trim47-202ENSMUST00000106441 Tmem243B2RVB9 118 aa12.49□□□□□ -0.41
Trim47-202ENSMUST00000106441 PrcdQ00LT2 53 aa12.49□□□□□ -0.41
Trim47-202ENSMUST00000106441 Rpl39lQ9CQD0 51 aa12.49□□□□□ -0.41
Trim47-202ENSMUST00000106441 Dnah10D3YYQ8 4591 aa12.48□□□□□ -0.41
Trim47-202ENSMUST00000106441 Gm7102J3QQ10 178 aa12.48□□□□□ -0.41
Trim47-202ENSMUST00000106441 Defa21Q8C1P2 93 aa12.48□□□□□ -0.41
Trim47-202ENSMUST00000106441 Gm10308Q9CVR5 141 aa12.48□□□□□ -0.41
Trim47-202ENSMUST00000106441 Ube2d4D3YUH6 135 aa12.47□□□□□ -0.41
Trim47-202ENSMUST00000106441 GhrhP16043 103 aa12.47□□□□□ -0.41
Trim47-202ENSMUST00000106441 Tcl1b5P56845 121 aa12.47□□□□□ -0.41
Trim47-202ENSMUST00000106441 Trav9n-4A0A075B631 113 aa12.46□□□□□ -0.42
Trim47-202ENSMUST00000106441 Ighv10-3A0A075B5T6 119 aa12.45□□□□□ -0.42
Trim47-202ENSMUST00000106441 D730001G18RikA0A087WQU7 115 aa12.45□□□□□ -0.42
Trim47-202ENSMUST00000106441 Igkv3-9A0A140T8P4 119 aa12.45□□□□□ -0.42
Trim47-202ENSMUST00000106441 Q9DAA7 145 aa12.45□□□□□ -0.42
Trim47-202ENSMUST00000106441 Notch1Q01705 2531 aa12.44□□□□□ -0.42
Trim47-202ENSMUST00000106441 Trbv13-2A0A140T8N6 113 aa12.44□□□□□ -0.42
Trim47-202ENSMUST00000106441 H2al1aQ5M8Q2 105 aa12.43□□□□□ -0.42
Trim47-202ENSMUST00000106441 Leap2Q91V13 76 aa12.43□□□□□ -0.42
Trim47-202ENSMUST00000106441 C530025M09RikF6RGA8 229 aa12.43□□□□□ -0.42
Trim47-202ENSMUST00000106441 9430015G10RikA2ASP7 199 aa12.42□□□□□ -0.42
Trim47-202ENSMUST00000106441 CnbpP53996 178 aaKnown RBP12.42□□□□□ -0.42
Trim47-202ENSMUST00000106441 Ormdl1Q921I0 153 aa12.42□□□□□ -0.42
Trim47-202ENSMUST00000106441 4930556J24RikQ9D4U7 146 aa12.42□□□□□ -0.42
Trim47-202ENSMUST00000106441 Ighv2-9A0A075B5Q5 116 aa12.42□□□□□ -0.42
Trim47-202ENSMUST00000106441 Cox7bP56393 80 aa12.42□□□□□ -0.42
Trim47-202ENSMUST00000106441 Gm9903Q8C9Y8 129 aa12.4□□□□□ -0.42
Trim47-202ENSMUST00000106441 Trav13-2A0A075B649 110 aa12.4□□□□□ -0.42
Trim47-202ENSMUST00000106441 E130208F15RikQ3UPV3 143 aa12.4□□□□□ -0.42
Trim47-202ENSMUST00000106441 Naa38Q9D2U5 125 aa12.4□□□□□ -0.42
Trim47-202ENSMUST00000106441 Kmt2aP55200 3966 aa12.39□□□□□ -0.43
Trim47-202ENSMUST00000106441 Smlr1J3QMJ4 66 aa12.39□□□□□ -0.43
Trim47-202ENSMUST00000106441 Igkv8-21A0A140T8P7 120 aa12.38□□□□□ -0.43
Trim47-202ENSMUST00000106441 Gm17349F7BGH6 99 aa12.38□□□□□ -0.43
Trim47-202ENSMUST00000106441 Ubl5Q9EPV8 73 aa12.38□□□□□ -0.43
Trim47-202ENSMUST00000106441 Dad1P61804 113 aa12.36□□□□□ -0.43
Trim47-202ENSMUST00000106441 Dnah14A0A140LIJ4 4489 aa12.36□□□□□ -0.43
Trim47-202ENSMUST00000106441 Ighv2-5A0A0A6YY69 116 aa12.35□□□□□ -0.43
Trim47-202ENSMUST00000106441 Gm10518F6UQQ9 182 aa12.35□□□□□ -0.43
Trim47-202ENSMUST00000106441 Prh1P05142 261 aa12.35□□□□□ -0.43
Trim47-202ENSMUST00000106441 EnhoQ8K1D8 76 aa12.35□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 84.6 ms