RNA–Protein interactions for RNA: ENSMUST00000092569.12

Ccdc43-201, Transcript of Coiled-coil domain-containing protein 43, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc43, Length 2,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43-201ENSMUST00000092569 Ighv1-56A0A0A6YXG2 117 aa10.68□□□□□ -0.7
Ccdc43-201ENSMUST00000092569 Igkv3-1A0A075B5P1 119 aa10.67□□□□□ -0.7
Ccdc43-201ENSMUST00000092569 Snhg11Q4G0K9 87 aa10.67□□□□□ -0.7
Ccdc43-201ENSMUST00000092569 5730596B20RikQ8BQ08 205 aa10.67□□□□□ -0.7
Ccdc43-201ENSMUST00000092569 Igkv8-24A0A140T8P5 121 aa10.66□□□□□ -0.7
Ccdc43-201ENSMUST00000092569 Gm16381A0A1Y7VKT9 73 aa10.66□□□□□ -0.7
Ccdc43-201ENSMUST00000092569 Lyrm7Q9DA03 104 aa10.66□□□□□ -0.7
Ccdc43-201ENSMUST00000092569 Wfdc12Q9JHY3 85 aa10.66□□□□□ -0.7
Ccdc43-201ENSMUST00000092569 Gm5142Q8C5X9 133 aa10.65□□□□□ -0.7
Ccdc43-201ENSMUST00000092569 Igkv8-18A0A0B4J1J3 123 aa10.65□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Gm11213A0A1B0GR83 88 aa10.65□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Gm867A0A1W2P7T4 151 aa10.64□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Gm5153P01627 120 aa10.64□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 P01896 185 aa10.64□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Gm10845Q3UNY9 185 aa10.63□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Anapc13Q8R034 74 aa10.63□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Dnal4Q9DCM4 105 aa10.63□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Igkv8-34A0A0G2JDU0 121 aa10.63□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Gm10251J3QPM5 127 aa10.63□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Igsf10Q3V1M1 2594 aa10.62□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Igkv8-16A0A0G2JDG9 121 aa10.62□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Gm10518F6UQQ9 182 aa10.62□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Ighv13-2A0A0A6YWN3 119 aa10.62□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Dnah14A0A140LIJ4 4489 aa10.61□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Smim26Q3V460 107 aa10.61□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Tcl1b3P56842 122 aa10.6□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 E130208F15RikQ3UPV3 143 aa10.6□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Pcp4P63054 62 aa10.6□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Acyp1P56376 99 aa10.59□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Trav14d-3-dv8A0A075B619 120 aa10.59□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Reg3bP35230 175 aa10.59□□□□□ -0.71
Ccdc43-201ENSMUST00000092569 Rpl39lQ9CQD0 51 aa10.58□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 Reg3dQ9QUS9 175 aa10.58□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 4930556J24RikQ9D4U7 146 aa10.58□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 Defa20Q45VN2 95 aa10.57□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 Spata3Q9D9T6 193 aa10.57□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 Znf414Q9DCK4 299 aa10.57□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 Ighv2-9A0A075B5Q5 116 aa10.56□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 1810062G17RikG3X8Y2 129 aa10.56□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 Csdc2Q91YQ3 154 aa10.56□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 AplnQ9R0R4 77 aa10.56□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 Trav3-4A0A075B654 114 aa10.55□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 Klk12B2RVZ0 247 aa10.55□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 Cox7bP56393 80 aa10.55□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 Tcl1b5P56845 121 aa10.55□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 Dnah3Q8BW94 4083 aa10.55□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 6430550D23RikE9Q1X6 194 aa10.55□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 Defa2P28309 93 aa10.55□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 P01819 144 aa10.54□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 CnbpP53996 178 aaKnown RBP10.54□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 Gm9903Q8C9Y8 129 aa10.54□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 A0A286YCN5 57 aa10.54□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 Gm10320E9PW43 113 aa10.54□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 Tmem213Q08EA8 116 aa10.53□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 MrapQ9D159 127 aa10.53□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 Xcl1P47993 114 aa10.53□□□□□ -0.72
Ccdc43-201ENSMUST00000092569 A730009L09RikA0A1B0GS82 72 aa10.52□□□□□ -0.73
Ccdc43-201ENSMUST00000092569 Rpl18aP62717 176 aaKnown RBP10.52□□□□□ -0.73
Ccdc43-201ENSMUST00000092569 Gm17509Q9CZ61 145 aa10.52□□□□□ -0.73
Ccdc43-201ENSMUST00000092569 Ube2d4D3YUH6 135 aa10.51□□□□□ -0.73
Ccdc43-201ENSMUST00000092569 Gm7102J3QQ10 178 aa10.51□□□□□ -0.73
Ccdc43-201ENSMUST00000092569 Ifitm6A0A1B0GS75 124 aa10.5□□□□□ -0.73
Ccdc43-201ENSMUST00000092569 Igkv2-109A0A075B5K6 120 aa10.5□□□□□ -0.73
Ccdc43-201ENSMUST00000092569 Igkv4-58A0A0G2JGI6 119 aa10.5□□□□□ -0.73
Ccdc43-201ENSMUST00000092569 Gm16181B0V2H2 73 aa10.5□□□□□ -0.73
Ccdc43-201ENSMUST00000092569 Gm9805F6YK59 57 aa10.5□□□□□ -0.73
Ccdc43-201ENSMUST00000092569 AY074887Q8R5F9 132 aa10.49□□□□□ -0.73
Ccdc43-201ENSMUST00000092569 Cox7b2Q9D2H1 82 aa10.49□□□□□ -0.73
Ccdc43-201ENSMUST00000092569 Ufsp1Q9CZP0 217 aa10.48□□□□□ -0.73
Ccdc43-201ENSMUST00000092569 Igkv4-92A0A0B4J1I2 117 aa10.47□□□□□ -0.73
Ccdc43-201ENSMUST00000092569 Sslp1Q3UN54 99 aa10.47□□□□□ -0.73
Ccdc43-201ENSMUST00000092569 9430015G10RikA2ASP7 199 aa10.46□□□□□ -0.73
Ccdc43-201ENSMUST00000092569 Atp5eP56382 52 aa10.45□□□□□ -0.74
Ccdc43-201ENSMUST00000092569 Hbb-b2P02089 147 aa10.45□□□□□ -0.74
Ccdc43-201ENSMUST00000092569 Gm10770F7D043 238 aa10.43□□□□□ -0.74
Ccdc43-201ENSMUST00000092569 Sprr4Q8CGN8 76 aa10.43□□□□□ -0.74
Ccdc43-201ENSMUST00000092569 E130218I03RikA0A0U1RNU5 63 aa10.43□□□□□ -0.74
Ccdc43-201ENSMUST00000092569 Igkv1-88A0A140T8N1 120 aa10.43□□□□□ -0.74
Ccdc43-201ENSMUST00000092569 Camk2n2Q78WH7 79 aa10.43□□□□□ -0.74
Ccdc43-201ENSMUST00000092569 Dnah7bL7N1Y0 4068 aa10.42□□□□□ -0.74
Ccdc43-201ENSMUST00000092569 TnxbO35452 4006 aa10.42□□□□□ -0.74
Ccdc43-201ENSMUST00000092569 Gm17577J3QNF7 156 aa10.42□□□□□ -0.74
Ccdc43-201ENSMUST00000092569 Prr13Q9CQJ5 137 aa10.41□□□□□ -0.74
Ccdc43-201ENSMUST00000092569 4930519P11RikQ9CUJ8 166 aa10.41□□□□□ -0.74
Ccdc43-201ENSMUST00000092569 Mrpl52Q9D0Y8 121 aa10.41□□□□□ -0.74
Ccdc43-201ENSMUST00000092569 Ighv10-1A0A0B4J1J6 119 aa10.41□□□□□ -0.74
Ccdc43-201ENSMUST00000092569 2310034G01RikA0A286YDL3 209 aa10.4□□□□□ -0.74
Ccdc43-201ENSMUST00000092569 Q9DAA7 145 aa10.4□□□□□ -0.74
Ccdc43-201ENSMUST00000092569 Gm5617Q91VN2 117 aa10.39□□□□□ -0.75
Ccdc43-201ENSMUST00000092569 Msrb1Q9JLC3 116 aa10.39□□□□□ -0.75
Ccdc43-201ENSMUST00000092569 Trav14-1A0A0G2JF94 121 aa10.39□□□□□ -0.75
Ccdc43-201ENSMUST00000092569 Gm9508A0A1W2P7W0 230 aa10.39□□□□□ -0.75
Ccdc43-201ENSMUST00000092569 Ighv10-3A0A075B5T6 119 aa10.38□□□□□ -0.75
Ccdc43-201ENSMUST00000092569 Gm16485Q8C4B7 115 aa10.38□□□□□ -0.75
Ccdc43-201ENSMUST00000092569 Dnah17Q69Z23 4481 aa10.36□□□□□ -0.75
Ccdc43-201ENSMUST00000092569 Igkv8-27A0A0G2JF28 120 aa10.36□□□□□ -0.75
Ccdc43-201ENSMUST00000092569 Igkv8-30A0A140T8M3 121 aa10.36□□□□□ -0.75
Ccdc43-201ENSMUST00000092569 Cd164Q9R0L9 197 aa10.36□□□□□ -0.75
Ccdc43-201ENSMUST00000092569 Igkv8-26A0A075B5N5 123 aa10.35□□□□□ -0.75
Ccdc43-201ENSMUST00000092569 Csmd3Q80T79 3707 aa10.35□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 55.6 ms