RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 BlcapP62951 87 aa10.55□□□□□ -0.72
Ebf3-208ENSMUST00000210774 Cep192E9Q4Y4 2514 aaKnown RBP10.55□□□□□ -0.72
Ebf3-208ENSMUST00000210774 Krtap16-1A2A5X5 502 aa10.54□□□□□ -0.72
Ebf3-208ENSMUST00000210774 Ighv1-61P01749 117 aa10.54□□□□□ -0.72
Ebf3-208ENSMUST00000210774 Chd6A3KFM7 2711 aa10.54□□□□□ -0.72
Ebf3-208ENSMUST00000210774 Igkv4-69A0A0B4J1I6 116 aa10.54□□□□□ -0.72
Ebf3-208ENSMUST00000210774 Wfdc15aQ8BH89 80 aa10.54□□□□□ -0.72
Ebf3-208ENSMUST00000210774 Dph3Q8K0W9 82 aa10.54□□□□□ -0.72
Ebf3-208ENSMUST00000210774 Cela2aP05208 271 aa10.53□□□□□ -0.72
Ebf3-208ENSMUST00000210774 Ntn5Q3UQ22 452 aa10.53□□□□□ -0.72
Ebf3-208ENSMUST00000210774 Bles03Q8VD62 251 aa10.53□□□□□ -0.72
Ebf3-208ENSMUST00000210774 Setd2E9Q5F9 2537 aa10.53□□□□□ -0.72
Ebf3-208ENSMUST00000210774 1810062G17RikG3X8Y2 129 aa10.53□□□□□ -0.72
Ebf3-208ENSMUST00000210774 Gm16381A0A1Y7VKT9 73 aa10.53□□□□□ -0.72
Ebf3-208ENSMUST00000210774 Gm15557A6PWY0 234 aa10.53□□□□□ -0.72
Ebf3-208ENSMUST00000210774 1810032O08RikE9PZV8 113 aa10.52□□□□□ -0.73
Ebf3-208ENSMUST00000210774 FlnaQ8BTM8 2647 aaKnown RBP10.52□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Igkv2-109A0A075B5K6 120 aa10.52□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Trav13-1A0A075B644 110 aa10.52□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Gm37389A0A0A6YW05 95 aa10.51□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Trav9n-2A0A0G2JDP3 113 aa10.51□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Ifitm6A0A1B0GS75 124 aa10.51□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Lage3Q9CR70 148 aa10.51□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Gm5153P01627 120 aa10.5□□□□□ -0.73
Ebf3-208ENSMUST00000210774 CnbpP53996 178 aaKnown RBP10.5□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Fxyd5P97808 178 aa10.5□□□□□ -0.73
Ebf3-208ENSMUST00000210774 E130208F15RikQ3UPV3 143 aa10.5□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Synj2bpQ9D6K5 145 aa10.5□□□□□ -0.73
Ebf3-208ENSMUST00000210774 4930546C10RikE9Q4Y3 121 aa10.5□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Snrpd3P62320 126 aaKnown RBP10.5□□□□□ -0.73
Ebf3-208ENSMUST00000210774 A530084C06RikQ3UTW2 186 aa10.5□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Brwd1Q921C3 2304 aa10.49□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Ighv2-7A0A075B5Q8 116 aa10.49□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Trbv13-2A0A140T8N6 113 aa10.49□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Acyp1P56376 99 aa10.49□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Mob4Q6PEB6 225 aa10.49□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Akap13E9Q394 2776 aa10.49□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Usp9yF8VPU6 2556 aa10.49□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Prr9Q8BV84 116 aa10.49□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Gm10322F7D7I4 111 aa10.48□□□□□ -0.73
Ebf3-208ENSMUST00000210774 P01755 137 aa10.48□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Pla2g2aP31482 146 aa10.48□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Gm10577Q3UDV9 132 aa10.48□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Gm10549Q3URY4 149 aa10.48□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Bean1Q9EQG5 255 aa10.48□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Zfp462B1AWL2 2495 aaKnown RBP10.48□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Ighv5-8A0A075B676 92 aa10.47□□□□□ -0.73
Ebf3-208ENSMUST00000210774 P01745 121 aa10.47□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Lmo4P61969 165 aa10.47□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Cops9Q3U898 57 aa10.47□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Fam19a3Q7TPG6 132 aa10.47□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Gm10509O88255 85 aa10.47□□□□□ -0.73
Ebf3-208ENSMUST00000210774 4930556J24RikQ9D4U7 146 aa10.47□□□□□ -0.73
Ebf3-208ENSMUST00000210774 NipblQ6KCD5 2798 aaKnown RBP10.46□□□□□ -0.73
Ebf3-208ENSMUST00000210774 Col7a1Q63870 2944 aa10.46□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Epg5Q80TA9 2572 aa10.46□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Ighv1-63A0A075B5X2 117 aa10.46□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Igkv4-53A0A0G2JFC6 119 aa10.46□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Igkv1-99F6XWB2 120 aa10.46□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Pdzd2E9Q1M1 2796 aa10.46□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Rbm3O89086 153 aaKnown RBP10.45□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Rnf152Q8BG47 203 aa10.45□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Q9DAA7 145 aa10.45□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Igkv8-21A0A140T8P7 120 aa10.45□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Rpl39lQ9CQD0 51 aa10.45□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Serp1Q9Z1W5 66 aa10.45□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Xirp2Q4U4S6 3784 aa10.43□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Crlf1Q9JM58 425 aa10.43□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Hivep3A2A884 2348 aa10.42□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Defa28D3Z1V9 94 aa10.41□□□□□ -0.74
Ebf3-208ENSMUST00000210774 GfyJ3KML8 504 aa10.41□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Pet100P0DJE0 76 aa10.41□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Klk12B2RVZ0 247 aa10.41□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Tfpi2O35536 230 aa10.41□□□□□ -0.74
Ebf3-208ENSMUST00000210774 P01819 144 aa10.41□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Trav13d-4A0A0G2JFX3 110 aa10.4□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Sec61gP60060 68 aa10.4□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Gm815Q3UWS2 115 aa10.4□□□□□ -0.74
Ebf3-208ENSMUST00000210774 Gm5142Q8C5X9 133 aa10.4□□□□□ -0.74
Ebf3-208ENSMUST00000210774 FshbQ60687 130 aa10.39□□□□□ -0.75
Ebf3-208ENSMUST00000210774 Ubl5Q9EPV8 73 aa10.39□□□□□ -0.75
Ebf3-208ENSMUST00000210774 H2al1bA0A087WP11 105 aa10.38□□□□□ -0.75
Ebf3-208ENSMUST00000210774 Ighv1-56A0A0A6YXG2 117 aa10.38□□□□□ -0.75
Ebf3-208ENSMUST00000210774 Gm17689B3GLJ4 109 aa10.38□□□□□ -0.75
Ebf3-208ENSMUST00000210774 H2al1kJ3QP08 105 aa10.38□□□□□ -0.75
Ebf3-208ENSMUST00000210774 Gm10845Q3UNY9 185 aa10.38□□□□□ -0.75
Ebf3-208ENSMUST00000210774 H2al1eQ810S6 105 aa10.38□□□□□ -0.75
Ebf3-208ENSMUST00000210774 Higd2aQ9CQJ1 106 aa10.38□□□□□ -0.75
Ebf3-208ENSMUST00000210774 H2al1mQ9DAD9 105 aa10.38□□□□□ -0.75
Ebf3-208ENSMUST00000210774 Fgfbp3Q1HCM0 245 aa10.37□□□□□ -0.75
Ebf3-208ENSMUST00000210774 Cdc42se2Q8BGH7 84 aa10.37□□□□□ -0.75
Ebf3-208ENSMUST00000210774 Ormdl1Q921I0 153 aa10.37□□□□□ -0.75
Ebf3-208ENSMUST00000210774 Ankrd17Q99NH0 2603 aaKnown RBP10.37□□□□□ -0.75
Ebf3-208ENSMUST00000210774 Tenm3Q9WTS6 2715 aa10.37□□□□□ -0.75
Ebf3-208ENSMUST00000210774 Mast4Q811L6 2618 aa10.36□□□□□ -0.75
Ebf3-208ENSMUST00000210774 Ighv1-58A0A075B5W9 117 aa10.36□□□□□ -0.75
Ebf3-208ENSMUST00000210774 Plac8l1Q08EJ0 177 aa10.36□□□□□ -0.75
Ebf3-208ENSMUST00000210774 P01738 130 aa10.36□□□□□ -0.75
Ebf3-208ENSMUST00000210774 Usmg5Q78IK2 58 aa10.36□□□□□ -0.75
Ebf3-208ENSMUST00000210774 Ube2e2Q91W82 201 aa10.36□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 56.8 ms