RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 CnfnQ6PCW6 111 aa9.7□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Ube2d1P61080 147 aaKnown RBP9.69□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Smrp1Q2MH31 260 aa9.69□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Znf706Q9D115 76 aaKnown RBP9.69□□□□□ -0.86
Rnf40-202ENSMUST00000205694 4930564D02RikQ9D4S4 103 aa9.69□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Ube2d3P61079 147 aa9.69□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Ube2d2P62838 147 aa9.69□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Wfdc12Q9JHY3 85 aa9.69□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Ptpn13Q64512 2453 aa9.68□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Vpreb1P13372 142 aa9.68□□□□□ -0.86
Rnf40-202ENSMUST00000205694 ScxQ64124 207 aa9.68□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Ndufs5Q99LY9 106 aa9.68□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Igkv8-30A0A140T8M3 121 aa9.68□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Gm10509O88255 85 aa9.68□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Psmb11Q8BG41 302 aa9.68□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Usp9xP70398 2559 aaKnown RBP9.67□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Gm11011D3Z3L9 86 aa9.67□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Smim1P0C8K7 78 aa9.67□□□□□ -0.86
Rnf40-202ENSMUST00000205694 H2al1bA0A087WP11 105 aa9.67□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Cdc42se2Q8BGH7 84 aa9.67□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Ighv2-9-1A0A075B697 116 aa9.66□□□□□ -0.86
Rnf40-202ENSMUST00000205694 4930535I16RikQ9CUI2 172 aa9.66□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Igkv3-12A0A140T8P0 119 aa9.66□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Rpl28P41105 137 aaKnown RBP9.66□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Pla2g1bQ9Z0Y2 146 aa9.65□□□□□ -0.86
Rnf40-202ENSMUST00000205694 PolqQ8CGS6 2544 aa9.65□□□□□ -0.86
Rnf40-202ENSMUST00000205694 1700011M02RikB1AX35 88 aa9.65□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Shisa2Q8QZV2 295 aa9.65□□□□□ -0.86
Rnf40-202ENSMUST00000205694 Defb40Q70KL2 73 aa9.65□□□□□ -0.86
Rnf40-202ENSMUST00000205694 B430305J03RikQ8BQQ8 176 aa9.64□□□□□ -0.87
Rnf40-202ENSMUST00000205694 Flg2Q2VIS4 2362 aa9.64□□□□□ -0.87
Rnf40-202ENSMUST00000205694 Serp2Q6TAW2 65 aa9.64□□□□□ -0.87
Rnf40-202ENSMUST00000205694 Piezo2Q8CD54 2822 aa9.64□□□□□ -0.87
Rnf40-202ENSMUST00000205694 Trbv13-2A0A140T8N6 113 aa9.64□□□□□ -0.87
Rnf40-202ENSMUST00000205694 Gm1968Q3T9I3 115 aa9.64□□□□□ -0.87
Rnf40-202ENSMUST00000205694 Ep400Q8CHI8 3072 aaKnown RBP9.63□□□□□ -0.87
Rnf40-202ENSMUST00000205694 Arhgap32Q811P8 2089 aa9.63□□□□□ -0.87
Rnf40-202ENSMUST00000205694 P84750 121 aa9.62□□□□□ -0.87
Rnf40-202ENSMUST00000205694 Ndufb1P0DN34 57 aa9.62□□□□□ -0.87
Rnf40-202ENSMUST00000205694 BtcQ05928 177 aa9.62□□□□□ -0.87
Rnf40-202ENSMUST00000205694 Trav14-1A0A0G2JF94 121 aa9.61□□□□□ -0.87
Rnf40-202ENSMUST00000205694 H2al1aQ5M8Q2 105 aa9.61□□□□□ -0.87
Rnf40-202ENSMUST00000205694 H2al1eQ810S6 105 aa9.61□□□□□ -0.87
Rnf40-202ENSMUST00000205694 CrygeQ03740 174 aa9.61□□□□□ -0.87
Rnf40-202ENSMUST00000205694 Gpha2Q925Q5 128 aa9.61□□□□□ -0.87
Rnf40-202ENSMUST00000205694 4930556J24RikQ9D4U7 146 aa9.61□□□□□ -0.87
Rnf40-202ENSMUST00000205694 Gm21748Q3UE70 102 aa9.6□□□□□ -0.87
Rnf40-202ENSMUST00000205694 Wfdc13Q5DQQ6 81 aa9.6□□□□□ -0.87
Rnf40-202ENSMUST00000205694 A0A286YE49 62 aa9.6□□□□□ -0.87
Rnf40-202ENSMUST00000205694 TroQ6DIC6 2087 aa9.6□□□□□ -0.87
Rnf40-202ENSMUST00000205694 Ighv8-11A0A075B5X4 119 aa9.6□□□□□ -0.87
Rnf40-202ENSMUST00000205694 Gm3443F7CCV5 94 aa9.6□□□□□ -0.87
Rnf40-202ENSMUST00000205694 A930009A15RikG3UYI6 118 aa9.6□□□□□ -0.87
Rnf40-202ENSMUST00000205694 SetxA2AKX3 2646 aa9.59□□□□□ -0.87
Rnf40-202ENSMUST00000205694 B230217C12RikE9Q3Z1 139 aa9.59□□□□□ -0.87
Rnf40-202ENSMUST00000205694 Apoc4Q61268 124 aa9.59□□□□□ -0.87
Rnf40-202ENSMUST00000205694 9230102O04RikA2ASX7 82 aa9.58□□□□□ -0.88
Rnf40-202ENSMUST00000205694 PtprbB2RU80 1998 aa9.58□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Krtap27-1E9PX37 202 aa9.58□□□□□ -0.88
Rnf40-202ENSMUST00000205694 1700074P13RikQ9D9G7 251 aa9.58□□□□□ -0.88
Rnf40-202ENSMUST00000205694 D730001G18RikA0A087WQU7 115 aa9.57□□□□□ -0.88
Rnf40-202ENSMUST00000205694 CenpwQ3URR0 86 aa9.56□□□□□ -0.88
Rnf40-202ENSMUST00000205694 SrarpQ3ULG3 163 aa9.56□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Usp34Q6ZQ93 3582 aa9.56□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Alms1Q8K4E0 3251 aa9.56□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Zfp462B1AWL2 2495 aaKnown RBP9.56□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Q9DAB9 146 aa9.55□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Pla2g2eQ9QUL3 142 aa9.55□□□□□ -0.88
Rnf40-202ENSMUST00000205694 TrrapQ80YV3 2565 aaKnown RBP9.55□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Sprr2jO70561 109 aa9.54□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Gm26566Q8CAC1 153 aa9.54□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Lama2Q60675 3118 aaKnown RBP9.54□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Defb10Q8R2I8 73 aa9.54□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Setd2E9Q5F9 2537 aa9.53□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Ifitm6A0A1B0GS75 124 aa9.53□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Cd164l2Q9D6W7 172 aa9.53□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Igkv8-28A0A0G2JE47 121 aa9.53□□□□□ -0.88
Rnf40-202ENSMUST00000205694 NpwA0A1L1STR8 176 aa9.53□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Gm9887F6RFI0 207 aa9.53□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Dnah12Q3V0Q1 3086 aa9.52□□□□□ -0.88
Rnf40-202ENSMUST00000205694 Gm5464Q3UY29 175 aa9.52□□□□□ -0.88
Rnf40-202ENSMUST00000205694 H2al1mQ9DAD9 105 aa9.52□□□□□ -0.88
Rnf40-202ENSMUST00000205694 4930524J08RikQ9CUJ5 163 aa9.52□□□□□ -0.89
Rnf40-202ENSMUST00000205694 Serp1Q9Z1W5 66 aa9.52□□□□□ -0.89
Rnf40-202ENSMUST00000205694 Ly6g6cQ9Z1Q4 126 aa9.51□□□□□ -0.89
Rnf40-202ENSMUST00000205694 Gm5142Q8C5X9 133 aa9.51□□□□□ -0.89
Rnf40-202ENSMUST00000205694 TeppQ6IMH0 216 aa9.51□□□□□ -0.89
Rnf40-202ENSMUST00000205694 HttP42859 3119 aa9.5□□□□□ -0.89
Rnf40-202ENSMUST00000205694 C130032M10RikQ8C888 123 aa9.5□□□□□ -0.89
Rnf40-202ENSMUST00000205694 Ighv8-13A0A075B5Y0 101 aa9.49□□□□□ -0.89
Rnf40-202ENSMUST00000205694 Prr9Q8BV84 116 aa9.49□□□□□ -0.89
Rnf40-202ENSMUST00000205694 PcntP48725 2898 aa9.49□□□□□ -0.89
Rnf40-202ENSMUST00000205694 Gm10845Q3UNY9 185 aa9.49□□□□□ -0.89
Rnf40-202ENSMUST00000205694 Wfdc6bF6ULY1 148 aa9.48□□□□□ -0.89
Rnf40-202ENSMUST00000205694 Ighv2-9A0A075B5Q5 116 aa9.47□□□□□ -0.89
Rnf40-202ENSMUST00000205694 Bri3P28662 125 aa9.47□□□□□ -0.89
Rnf40-202ENSMUST00000205694 Gm17509Q9CZ61 145 aa9.47□□□□□ -0.89
Rnf40-202ENSMUST00000205694 Igkv3-7A0A0G2JE31 119 aa9.46□□□□□ -0.89
Rnf40-202ENSMUST00000205694 Gm10267M0QWD8 85 aa9.46□□□□□ -0.9
Rnf40-202ENSMUST00000205694 4930432M17RikQ3V0W9 174 aa9.45□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 101.9 ms