RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Gm3250E9Q1M3 230 aa8.07□□□□□ -1.12
Vps54-202ENSMUST00000109578 GfyJ3KML8 504 aa8.07□□□□□ -1.12
Vps54-202ENSMUST00000109578 Prh1P05142 261 aa8.07□□□□□ -1.12
Vps54-202ENSMUST00000109578 Tmem213Q08EA8 116 aa8.07□□□□□ -1.12
Vps54-202ENSMUST00000109578 Ndufa12Q7TMF3 145 aaKnown RBP8.06□□□□□ -1.12
Vps54-202ENSMUST00000109578 Gm10577Q3UDV9 132 aa8.06□□□□□ -1.12
Vps54-202ENSMUST00000109578 Vmo1Q5SXG7 201 aa8.06□□□□□ -1.12
Vps54-202ENSMUST00000109578 Pla2g1bQ9Z0Y2 146 aa8.06□□□□□ -1.12
Vps54-202ENSMUST00000109578 5730596B20RikQ8BQ08 205 aa8.05□□□□□ -1.12
Vps54-202ENSMUST00000109578 Defa1P11477 93 aa8.05□□□□□ -1.12
Vps54-202ENSMUST00000109578 Defb50Q6TU36 73 aa8.05□□□□□ -1.12
Vps54-202ENSMUST00000109578 MobpQ9D2P8 170 aa8.05□□□□□ -1.12
Vps54-202ENSMUST00000109578 Cd99Q8VCN6 175 aa8.05□□□□□ -1.12
Vps54-202ENSMUST00000109578 9430069I07RikQ9CX21 111 aa8.05□□□□□ -1.12
Vps54-202ENSMUST00000109578 Tex15F8VPN2 2785 aa8.05□□□□□ -1.12
Vps54-202ENSMUST00000109578 Trav3-4A0A075B654 114 aa8.04□□□□□ -1.12
Vps54-202ENSMUST00000109578 Chchd7Q8K2Q5 85 aa8.04□□□□□ -1.12
Vps54-202ENSMUST00000109578 Trav13-1A0A075B644 110 aa8.03□□□□□ -1.12
Vps54-202ENSMUST00000109578 Cops9Q3U898 57 aa8.03□□□□□ -1.12
Vps54-202ENSMUST00000109578 Ly6c2P0CW03 131 aa8.03□□□□□ -1.12
Vps54-202ENSMUST00000109578 Lage3Q9CR70 148 aa8.03□□□□□ -1.12
Vps54-202ENSMUST00000109578 Zfand2aQ9JII7 171 aa8.03□□□□□ -1.12
Vps54-202ENSMUST00000109578 Cox6b1P56391 86 aaKnown RBP8.03□□□□□ -1.12
Vps54-202ENSMUST00000109578 Il19Q8CJ70 176 aa8.03□□□□□ -1.12
Vps54-202ENSMUST00000109578 Lyrm9Q3UN90 78 aa8.02□□□□□ -1.13
Vps54-202ENSMUST00000109578 Gm904Q3V2L5 102 aa8.02□□□□□ -1.13
Vps54-202ENSMUST00000109578 Tm2d2Q8R0I4 213 aa8.02□□□□□ -1.13
Vps54-202ENSMUST00000109578 Gm10549Q3URY4 149 aa8.02□□□□□ -1.13
Vps54-202ENSMUST00000109578 Igkv4-72A0A0B4J1I4 117 aa8.02□□□□□ -1.13
Vps54-202ENSMUST00000109578 Atp5eP56382 52 aa8.02□□□□□ -1.13
Vps54-202ENSMUST00000109578 Trav13n-2A0A0G2JF93 110 aa8.01□□□□□ -1.13
Vps54-202ENSMUST00000109578 4930524J08RikQ9CUJ5 163 aa8.01□□□□□ -1.13
Vps54-202ENSMUST00000109578 SbsponQ3UPR9 264 aa8.01□□□□□ -1.13
Vps54-202ENSMUST00000109578 Rpl28P41105 137 aaKnown RBP8□□□□□ -1.13
Vps54-202ENSMUST00000109578 Gm10735Q3US96 136 aa8□□□□□ -1.13
Vps54-202ENSMUST00000109578 PkigO70139 76 aa8□□□□□ -1.13
Vps54-202ENSMUST00000109578 Dand5Q76LW6 185 aa8□□□□□ -1.13
Vps54-202ENSMUST00000109578 Igkv1-99F6XWB2 120 aa7.99□□□□□ -1.13
Vps54-202ENSMUST00000109578 Gm3233E9Q2H5 230 aa7.99□□□□□ -1.13
Vps54-202ENSMUST00000109578 Igkv4-53A0A0G2JFC6 119 aa7.99□□□□□ -1.13
Vps54-202ENSMUST00000109578 Defa16P50714 93 aa7.99□□□□□ -1.13
Vps54-202ENSMUST00000109578 Gm28539A0A087WSL9 92 aa7.98□□□□□ -1.13
Vps54-202ENSMUST00000109578 Gm9767G3X930 207 aa7.98□□□□□ -1.13
Vps54-202ENSMUST00000109578 Igkv4-54A0A0G2JES9 117 aa7.98□□□□□ -1.13
Vps54-202ENSMUST00000109578 Prss58Q8BW11 241 aa7.98□□□□□ -1.13
Vps54-202ENSMUST00000109578 Igkv6-13A0A0G2JGY3 119 aa7.97□□□□□ -1.13
Vps54-202ENSMUST00000109578 Smim20D3Z7Q2 69 aa7.97□□□□□ -1.13
Vps54-202ENSMUST00000109578 Ighv2-9-1A0A075B697 116 aa7.96□□□□□ -1.13
Vps54-202ENSMUST00000109578 Nbeal2Q6ZQA0 2742 aa7.96□□□□□ -1.14
Vps54-202ENSMUST00000109578 2010109I03RikQ9CQ11 111 aa7.96□□□□□ -1.14
Vps54-202ENSMUST00000109578 Trav13-2A0A075B649 110 aa7.95□□□□□ -1.14
Vps54-202ENSMUST00000109578 Gm16381A0A1Y7VKT9 73 aa7.95□□□□□ -1.14
Vps54-202ENSMUST00000109578 Leap2Q91V13 76 aa7.95□□□□□ -1.14
Vps54-202ENSMUST00000109578 Spink4O35679 86 aa7.95□□□□□ -1.14
Vps54-202ENSMUST00000109578 Xcl1P47993 114 aa7.95□□□□□ -1.14
Vps54-202ENSMUST00000109578 Ighv8-11A0A075B5X4 119 aa7.95□□□□□ -1.14
Vps54-202ENSMUST00000109578 Gm7102J3QQ10 178 aa7.94□□□□□ -1.14
Vps54-202ENSMUST00000109578 Apoc4Q61268 124 aa7.94□□□□□ -1.14
Vps54-202ENSMUST00000109578 Ss18l2Q9D174 77 aa7.94□□□□□ -1.14
Vps54-202ENSMUST00000109578 Krtap24-1G3X9A2 248 aa7.94□□□□□ -1.14
Vps54-202ENSMUST00000109578 PrcdQ00LT2 53 aa7.94□□□□□ -1.14
Vps54-202ENSMUST00000109578 Odf3l2Q3TZ65 277 aa7.94□□□□□ -1.14
Vps54-202ENSMUST00000109578 Znf414Q9DCK4 299 aa7.94□□□□□ -1.14
Vps54-202ENSMUST00000109578 BB014433Q8C5R5 389 aa7.93□□□□□ -1.14
Vps54-202ENSMUST00000109578 Defa25Q5G864 92 aa7.93□□□□□ -1.14
Vps54-202ENSMUST00000109578 Gm5142Q8C5X9 133 aa7.93□□□□□ -1.14
Vps54-202ENSMUST00000109578 Zfp951A0A087WRH0 451 aa7.92□□□□□ -1.14
Vps54-202ENSMUST00000109578 Tenm4Q3UHK6 2771 aa7.92□□□□□ -1.14
Vps54-202ENSMUST00000109578 Gm43218A0A0G2JGT0 114 aa7.92□□□□□ -1.14
Vps54-202ENSMUST00000109578 Igf1P05017 153 aa7.92□□□□□ -1.14
Vps54-202ENSMUST00000109578 MifP34884 115 aaKnown RBP7.92□□□□□ -1.14
Vps54-202ENSMUST00000109578 Hbb-b2P02089 147 aa7.92□□□□□ -1.14
Vps54-202ENSMUST00000109578 Dnal4Q9DCM4 105 aa7.92□□□□□ -1.14
Vps54-202ENSMUST00000109578 1810062G17RikG3X8Y2 129 aa7.91□□□□□ -1.14
Vps54-202ENSMUST00000109578 Gm867A0A1W2P7T4 151 aa7.91□□□□□ -1.14
Vps54-202ENSMUST00000109578 Defa2P28309 93 aa7.91□□□□□ -1.14
Vps54-202ENSMUST00000109578 D130052B06RikQ3UW13 202 aa7.91□□□□□ -1.14
Vps54-202ENSMUST00000109578 Fbn1Q61554 2873 aaKnown RBP7.91□□□□□ -1.14
Vps54-202ENSMUST00000109578 Acyp1P56376 99 aa7.9□□□□□ -1.14
Vps54-202ENSMUST00000109578 Igkv4-61A0A0G2JH00 117 aa7.9□□□□□ -1.14
Vps54-202ENSMUST00000109578 Rpl39lQ9CQD0 51 aa7.9□□□□□ -1.14
Vps54-202ENSMUST00000109578 C530025M09RikF6RGA8 229 aa7.9□□□□□ -1.15
Vps54-202ENSMUST00000109578 4930519P11RikQ9CUJ8 166 aa7.89□□□□□ -1.15
Vps54-202ENSMUST00000109578 Wfdc12Q9JHY3 85 aa7.89□□□□□ -1.15
Vps54-202ENSMUST00000109578 Tenm1Q9WTS4 2731 aa7.89□□□□□ -1.15
Vps54-202ENSMUST00000109578 Trav9n-4A0A075B631 113 aa7.89□□□□□ -1.15
Vps54-202ENSMUST00000109578 Ighv1-56A0A0A6YXG2 117 aa7.89□□□□□ -1.15
Vps54-202ENSMUST00000109578 Klk12B2RVZ0 247 aa7.89□□□□□ -1.15
Vps54-202ENSMUST00000109578 SmcpP15265 143 aa7.89□□□□□ -1.15
Vps54-202ENSMUST00000109578 Defa20Q45VN2 95 aa7.89□□□□□ -1.15
Vps54-202ENSMUST00000109578 4930535I16RikQ9CUI2 172 aa7.89□□□□□ -1.15
Vps54-202ENSMUST00000109578 Trbv13-2A0A140T8N6 113 aa7.89□□□□□ -1.15
Vps54-202ENSMUST00000109578 Igkv2-109A0A075B5K6 120 aa7.89□□□□□ -1.15
Vps54-202ENSMUST00000109578 Ifitm6A0A1B0GS75 124 aa7.88□□□□□ -1.15
Vps54-202ENSMUST00000109578 Ighv1-59A0A0A6YXE0 117 aa7.87□□□□□ -1.15
Vps54-202ENSMUST00000109578 Tmem223Q9CQE2 199 aaKnown RBP7.87□□□□□ -1.15
Vps54-202ENSMUST00000109578 Sprr1bQ62267 153 aa7.87□□□□□ -1.15
Vps54-202ENSMUST00000109578 Igkv8-18A0A0B4J1J3 123 aa7.86□□□□□ -1.15
Vps54-202ENSMUST00000109578 Gm20726G3UX18 150 aa7.86□□□□□ -1.15
Vps54-202ENSMUST00000109578 D730001G18RikA0A087WQU7 115 aa7.86□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 59.5 ms