RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 NischQ80TM9 1593 aa21.62■■□□□ 1.05
Vps54-202ENSMUST00000109578 Gm35339A0A140LHH9 1649 aa20.94■□□□□ 0.94
Vps54-202ENSMUST00000109578 Abcc9P70170 1546 aa20.94■□□□□ 0.94
Vps54-202ENSMUST00000109578 Rhox8Q6VSS7 320 aa20.54■□□□□ 0.88
Vps54-202ENSMUST00000109578 Abcc8B2RUS7 1588 aa20.45■□□□□ 0.86
Vps54-202ENSMUST00000109578 Rtl1Q7M732 1744 aa19.93■□□□□ 0.78
Vps54-202ENSMUST00000109578 Ccdc180J3QNE4 1664 aa19.72■□□□□ 0.75
Vps54-202ENSMUST00000109578 Zcchc6Q5BLK4 1491 aaKnown RBP19.37■□□□□ 0.69
Vps54-202ENSMUST00000109578 Ccdc136Q3TVA9 1136 aa19.07■□□□□ 0.64
Vps54-202ENSMUST00000109578 Rpgrip1Q9EPQ2 1331 aa19.06■□□□□ 0.64
Vps54-202ENSMUST00000109578 Ehmt2Q9Z148 1263 aaKnown RBP19.02■□□□□ 0.64
Vps54-202ENSMUST00000109578 ScribQ80U72 1612 aa18.98■□□□□ 0.63
Vps54-202ENSMUST00000109578 Rb1cc1Q9ESK9 1588 aa18.96■□□□□ 0.63
Vps54-202ENSMUST00000109578 Dcaf1Q80TR8 1506 aa18.95■□□□□ 0.62
Vps54-202ENSMUST00000109578 HrcG5E8J6 738 aa18.88■□□□□ 0.61
Vps54-202ENSMUST00000109578 Acin1Q9JIX8 1338 aaKnown RBP18.87■□□□□ 0.61
Vps54-202ENSMUST00000109578 Baz1aO88379 1555 aa18.69■□□□□ 0.58
Vps54-202ENSMUST00000109578 Kdm5dQ62240 1548 aa18.69■□□□□ 0.58
Vps54-202ENSMUST00000109578 Trim41Q5NCC3 630 aa18.63■□□□□ 0.57
Vps54-202ENSMUST00000109578 NacadQ5SWP3 1504 aa18.45■□□□□ 0.54
Vps54-202ENSMUST00000109578 Pcgf6Q99NA9 353 aa18.29■□□□□ 0.52
Vps54-202ENSMUST00000109578 Smarca2Q6DIC0 1577 aa18.29■□□□□ 0.52
Vps54-202ENSMUST00000109578 Cep164Q5DU05 1446 aa18.26■□□□□ 0.51
Vps54-202ENSMUST00000109578 Crybg2B7ZCC2 1516 aa18.19■□□□□ 0.5
Vps54-202ENSMUST00000109578 Cngb1E1AZ71 1325 aa18.17■□□□□ 0.5
Vps54-202ENSMUST00000109578 Chic1Q8CBW7 227 aa18.15■□□□□ 0.5
Vps54-202ENSMUST00000109578 Gab3Q8BSM5 595 aa18.14■□□□□ 0.49
Vps54-202ENSMUST00000109578 Rsf1E9PWW9 1441 aaKnown RBP18.06■□□□□ 0.48
Vps54-202ENSMUST00000109578 Sycp2Q9CUU3 1500 aa18.06■□□□□ 0.48
Vps54-202ENSMUST00000109578 Supt5hO55201 1082 aaKnown RBP18.01■□□□□ 0.47
Vps54-202ENSMUST00000109578 Cecr2E9Q2Z1 1453 aa17.96■□□□□ 0.47
Vps54-202ENSMUST00000109578 Ccdc88bQ4QRL3 1481 aa17.93■□□□□ 0.46
Vps54-202ENSMUST00000109578 Brd4Q9ESU6 1400 aaKnown RBP17.91■□□□□ 0.46
Vps54-202ENSMUST00000109578 Golga3P55937 1487 aa17.82■□□□□ 0.44
Vps54-202ENSMUST00000109578 Zeb1Q64318 1117 aa17.8■□□□□ 0.44
Vps54-202ENSMUST00000109578 Synj1Q8CHC4 1574 aa17.79■□□□□ 0.44
Vps54-202ENSMUST00000109578 Esf1Q3V1V3 845 aaKnown RBP17.78■□□□□ 0.44
Vps54-202ENSMUST00000109578 Mier1Q5UAK0 511 aa17.75■□□□□ 0.43
Vps54-202ENSMUST00000109578 BicraF8VPZ9 1578 aa17.68■□□□□ 0.42
Vps54-202ENSMUST00000109578 CftrP26361 1476 aa17.64■□□□□ 0.41
Vps54-202ENSMUST00000109578 NefmP08553 848 aa17.62■□□□□ 0.41
Vps54-202ENSMUST00000109578 Neurod1Q60867 357 aa17.58■□□□□ 0.4
Vps54-202ENSMUST00000109578 Top2bQ64511 1612 aa17.51■□□□□ 0.39
Vps54-202ENSMUST00000109578 UbtfP25976 765 aaKnown RBP17.51■□□□□ 0.39
Vps54-202ENSMUST00000109578 Sall2Q9QX96 1004 aa17.5■□□□□ 0.39
Vps54-202ENSMUST00000109578 Cc2d2aQ8CFW7 1633 aa17.44■□□□□ 0.38
Vps54-202ENSMUST00000109578 Cttnbp2B9EJA2 1648 aa17.43■□□□□ 0.38
Vps54-202ENSMUST00000109578 Myt1lP97500 1187 aa17.41■□□□□ 0.38
Vps54-202ENSMUST00000109578 Rapgef2Q8CHG7 1496 aa17.34■□□□□ 0.37
Vps54-202ENSMUST00000109578 Smarca4Q3TKT4 1613 aaKnown RBP17.31■□□□□ 0.36
Vps54-202ENSMUST00000109578 Aebp2Q9Z248 504 aaKnown RBP17.29■□□□□ 0.36
Vps54-202ENSMUST00000109578 Wdr66E9Q743 1299 aa17.28■□□□□ 0.36
Vps54-202ENSMUST00000109578 Fmn1Q05860 1466 aa17.27■□□□□ 0.35
Vps54-202ENSMUST00000109578 Cep162Q6ZQ06 1403 aa17.25■□□□□ 0.35
Vps54-202ENSMUST00000109578 Npm2Q80W85 207 aa17.24■□□□□ 0.35
Vps54-202ENSMUST00000109578 Top2aQ01320 1528 aaKnown RBP17.24■□□□□ 0.35
Vps54-202ENSMUST00000109578 Ppargc1bQ8VHJ7 1014 aa17.23■□□□□ 0.35
Vps54-202ENSMUST00000109578 Las1lA2BE28 776 aaKnown RBP17.22■□□□□ 0.35
Vps54-202ENSMUST00000109578 Plekhg3Q4VAC9 1341 aa17.17■□□□□ 0.34
Vps54-202ENSMUST00000109578 Clip1Q922J3 1391 aa17.1■□□□□ 0.33
Vps54-202ENSMUST00000109578 Iqgap2Q3UQ44 1575 aa17.09■□□□□ 0.33
Vps54-202ENSMUST00000109578 Anks4bQ8K3X6 423 aa17.06■□□□□ 0.32
Vps54-202ENSMUST00000109578 ClspnQ80YR7 1315 aa17.04■□□□□ 0.32
Vps54-202ENSMUST00000109578 TonslQ6NZL6 1363 aa17.03■□□□□ 0.32
Vps54-202ENSMUST00000109578 Csrnp3P59055 597 aa17.01■□□□□ 0.31
Vps54-202ENSMUST00000109578 Nop58Q6DFW4 536 aaKnown RBP16.98■□□□□ 0.31
Vps54-202ENSMUST00000109578 Cdk11bP24788 784 aaKnown RBP16.97■□□□□ 0.31
Vps54-202ENSMUST00000109578 Ap3b1Q9Z1T1 1105 aa16.96■□□□□ 0.31
Vps54-202ENSMUST00000109578 Il27Q8K3I6 234 aa16.96■□□□□ 0.3
Vps54-202ENSMUST00000109578 Eif4g1Q6NZJ6 1600 aaKnown RBP16.95■□□□□ 0.3
Vps54-202ENSMUST00000109578 1700123L14RikQ3V2K7 440 aa16.93■□□□□ 0.3
Vps54-202ENSMUST00000109578 Atad2bE9Q166 1460 aaKnown RBP16.92■□□□□ 0.3
Vps54-202ENSMUST00000109578 Ncapd3Q6ZQK0 1506 aa16.91■□□□□ 0.3
Vps54-202ENSMUST00000109578 PtprkP35822 1457 aa16.91■□□□□ 0.3
Vps54-202ENSMUST00000109578 Arhgap35Q91YM2 1499 aa16.89■□□□□ 0.29
Vps54-202ENSMUST00000109578 Eid3Q3V124 375 aa16.87■□□□□ 0.29
Vps54-202ENSMUST00000109578 TnnQ80Z71 1560 aa16.84■□□□□ 0.29
Vps54-202ENSMUST00000109578 Arap1Q4LDD4 1452 aa16.83■□□□□ 0.28
Vps54-202ENSMUST00000109578 Eea1Q8BL66 1411 aa16.8■□□□□ 0.28
Vps54-202ENSMUST00000109578 Pds5bQ4VA53 1446 aaKnown RBP16.78■□□□□ 0.28
Vps54-202ENSMUST00000109578 Setd5Q5XJV7 1441 aa16.78■□□□□ 0.28
Vps54-202ENSMUST00000109578 Frmpd1A2AKB4 1549 aa16.77■□□□□ 0.27
Vps54-202ENSMUST00000109578 NrkQ9R0G8 1455 aa16.76■□□□□ 0.27
Vps54-202ENSMUST00000109578 Kif15Q6P9L6 1387 aa16.75■□□□□ 0.27
Vps54-202ENSMUST00000109578 Gm38655A0A286YDK6 273 aa16.7■□□□□ 0.26
Vps54-202ENSMUST00000109578 Arhgef5E9Q7D5 1581 aa16.7■□□□□ 0.26
Vps54-202ENSMUST00000109578 Wdr62Q3U3T8 1523 aa16.68■□□□□ 0.26
Vps54-202ENSMUST00000109578 Shroom4Q1W617 1475 aa16.68■□□□□ 0.26
Vps54-202ENSMUST00000109578 Lamc3Q9R0B6 1581 aa16.67■□□□□ 0.26
Vps54-202ENSMUST00000109578 Kdm5bQ80Y84 1544 aa16.66■□□□□ 0.26
Vps54-202ENSMUST00000109578 Ccdc18Q640L5 1455 aa16.65■□□□□ 0.26
Vps54-202ENSMUST00000109578 BlmO88700 1416 aa16.63■□□□□ 0.25
Vps54-202ENSMUST00000109578 Mapk8ip2Q9ERE9 830 aa16.63■□□□□ 0.25
Vps54-202ENSMUST00000109578 AqrQ8CFQ3 1481 aaKnown RBP16.62■□□□□ 0.25
Vps54-202ENSMUST00000109578 Camsap1A2AHC3 1581 aa16.62■□□□□ 0.25
Vps54-202ENSMUST00000109578 Aplp2Q06335 707 aa16.61■□□□□ 0.25
Vps54-202ENSMUST00000109578 Lmod2Q3UHZ5 550 aa16.61■□□□□ 0.25
Vps54-202ENSMUST00000109578 Fam50aQ9WV03 339 aaKnown RBP16.6■□□□□ 0.25
Vps54-202ENSMUST00000109578 Map3k1P53349 1493 aa16.58■□□□□ 0.24
Vps54-202ENSMUST00000109578 Naip1Q9QWK5 1403 aa16.58■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 567.1 ms