RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 SmcpP15265 143 aa7.88□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Vmo1Q5SXG7 201 aa7.88□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Rab37Q9JKM7 223 aa7.88□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Krtap10-10A0A1W2P7T6 217 aa7.87□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Gm10542F6XDR3 90 aa7.87□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Ighv1-61P01749 117 aa7.87□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Phxr5P08399 672 aa7.87□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Spata3Q9D9T6 193 aa7.87□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Timm17bQ9Z0V7 172 aa7.87□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Ighv1-62-1A0A075B5U3 116 aa7.86□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Igkv4-53A0A0G2JFC6 119 aa7.86□□□□□ -1.15
Vamp1-202ENSMUST00000063588 PkigO70139 76 aa7.86□□□□□ -1.15
Vamp1-202ENSMUST00000063588 PrcdQ00LT2 53 aa7.86□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Odf3l2Q3TZ65 277 aa7.86□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Gm21748Q3UE70 102 aa7.86□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Morn5Q9DAI9 170 aa7.86□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Sh2d1aO88890 126 aa7.86□□□□□ -1.15
Vamp1-202ENSMUST00000063588 CckP09240 115 aa7.86□□□□□ -1.15
Vamp1-202ENSMUST00000063588 PolP10400 120 aa7.86□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Wfdc17Q5SSJ1 76 aa7.86□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Tmem223Q9CQE2 199 aaKnown RBP7.86□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Ss18l2Q9D174 77 aa7.86□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Trav13d-1A0A075B606 110 aa7.85□□□□□ -1.15
Vamp1-202ENSMUST00000063588 C920008G01RikA0A0B4J1N1 112 aa7.85□□□□□ -1.15
Vamp1-202ENSMUST00000063588 P01823 113 aa7.85□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Tm2d2Q8R0I4 213 aa7.85□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Csdc2Q91YQ3 154 aa7.85□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Higd2aQ9CQJ1 106 aa7.85□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Fgf23Q9EPC2 251 aa7.85□□□□□ -1.15
Vamp1-202ENSMUST00000063588 CirbpP60824 172 aaKnown RBP7.84□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Rps28P62858 69 aaKnown RBP7.84□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Defb10Q8R2I8 73 aa7.84□□□□□ -1.15
Vamp1-202ENSMUST00000063588 Srrm2Q8BTI8 2703 aaKnown RBP7.83□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Gm20730A0A075B5J6 119 aa7.83□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Trbv13-2A0A140T8N6 113 aa7.83□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Gm11444F6QMA6 170 aa7.83□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Rmi2Q3UPE3 149 aa7.83□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Tomm7Q9D173 55 aa7.83□□□□□ -1.16
Vamp1-202ENSMUST00000063588 1700010B08RikQ9DAI7 102 aa7.83□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Col6a5A6H584 2640 aa7.82□□□□□ -1.16
Vamp1-202ENSMUST00000063588 PtprqP0C5E4 2300 aa7.82□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Ighv8-13A0A075B5Y0 101 aa7.82□□□□□ -1.16
Vamp1-202ENSMUST00000063588 4930432M17RikQ3V0W9 174 aa7.82□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Sprr1bQ62267 153 aa7.82□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Wdr38Q9D994 303 aa7.82□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Hspg2Q05793 3707 aaKnown RBP7.82□□□□□ -1.16
Vamp1-202ENSMUST00000063588 ApcQ61315 2845 aa7.81□□□□□ -1.16
Vamp1-202ENSMUST00000063588 MalO09198 153 aa7.81□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Znf414Q9DCK4 299 aa7.81□□□□□ -1.16
Vamp1-202ENSMUST00000063588 6430550D23RikE9Q1X6 194 aa7.8□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Zfand2aQ9JII7 171 aa7.8□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Igkv3-9A0A140T8P4 119 aa7.79□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Igkv1-99F6XWB2 120 aa7.79□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Pglyrp4Q0VB07 374 aa7.79□□□□□ -1.16
Vamp1-202ENSMUST00000063588 CenpwQ3URR0 86 aa7.79□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Q9DAQ5 155 aa7.79□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Trav11A0A0B4J1J9 114 aa7.78□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Prss58Q8BW11 241 aa7.78□□□□□ -1.16
Vamp1-202ENSMUST00000063588 RetnQ99P87 114 aa7.78□□□□□ -1.16
Vamp1-202ENSMUST00000063588 HilpdaQ9JLS0 64 aa7.78□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Ighv8-11A0A075B5X4 119 aa7.78□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Trav7-6A0A075B640 112 aa7.78□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Ighv2-9-1A0A075B697 116 aa7.78□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Glrp1E9Q9S8 174 aa7.78□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Gm10577Q3UDV9 132 aa7.78□□□□□ -1.16
Vamp1-202ENSMUST00000063588 Trav13-4-dv7A0A075B6C2 110 aa7.77□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Trav13n-1A0A0G2JEU8 110 aa7.76□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Tmem258P61166 79 aa7.76□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Trav13d-4A0A0G2JFX3 110 aa7.75□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Samd13D3YUG0 102 aa7.75□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Gm7138L7N2C3 230 aa7.75□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Defb50Q6TU36 73 aa7.75□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Gm3238W4VSP7 230 aa7.75□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Kmt2aP55200 3966 aa7.75□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Igkv6-13A0A0G2JGY3 119 aa7.74□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Gm19935A0A1B0GSF9 52 aa7.74□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Gm36176A0A1W2P8D5 158 aa7.74□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Acyp1P56376 99 aa7.74□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Gm16181B0V2H2 73 aa7.73□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Prp2P05143 317 aa7.73□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Gm10767Q3TQP0 103 aa7.73□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Apoc4Q61268 124 aa7.73□□□□□ -1.17
Vamp1-202ENSMUST00000063588 4930415O20RikQ8CDT5 131 aa7.73□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Igkv8-34A0A0G2JDU0 121 aa7.72□□□□□ -1.17
Vamp1-202ENSMUST00000063588 H2al1aQ5M8Q2 105 aa7.72□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Gm4861Q8C5A4 106 aa7.72□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Notch1Q01705 2531 aa7.72□□□□□ -1.17
Vamp1-202ENSMUST00000063588 1700011M02RikB1AX35 88 aa7.71□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Gm10135F6TEE5 83 aa7.71□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Lamtor3O88653 124 aa7.71□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Xcl1P47993 114 aa7.71□□□□□ -1.17
Vamp1-202ENSMUST00000063588 PemtQ61907 199 aa7.71□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Sostdc1Q9CQN4 206 aa7.71□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Lage3Q9CR70 148 aa7.71□□□□□ -1.17
Vamp1-202ENSMUST00000063588 Trav9n-4A0A075B631 113 aa7.7□□□□□ -1.18
Vamp1-202ENSMUST00000063588 Gm29423A0A087WRM1 55 aa7.7□□□□□ -1.18
Vamp1-202ENSMUST00000063588 Trav9d-4A0A0G2JG37 103 aa7.7□□□□□ -1.18
Vamp1-202ENSMUST00000063588 Dnah3Q8BW94 4083 aa7.69□□□□□ -1.18
Vamp1-202ENSMUST00000063588 Lst1O08843 95 aa7.69□□□□□ -1.18
Vamp1-202ENSMUST00000063588 Tcl1b5P56845 121 aa7.69□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 143.4 ms