RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Gm35339A0A140LHH9 1649 aa23.22■■□□□ 1.31
Vamp1-202ENSMUST00000063588 NischQ80TM9 1593 aa23.2■■□□□ 1.3
Vamp1-202ENSMUST00000063588 Abcc9P70170 1546 aa22.56■■□□□ 1.2
Vamp1-202ENSMUST00000063588 Abcc8B2RUS7 1588 aa22.16■■□□□ 1.14
Vamp1-202ENSMUST00000063588 ScribQ80U72 1612 aa20.85■□□□□ 0.93
Vamp1-202ENSMUST00000063588 Rhox8Q6VSS7 320 aa20.78■□□□□ 0.92
Vamp1-202ENSMUST00000063588 Dcaf1Q80TR8 1506 aa20.77■□□□□ 0.91
Vamp1-202ENSMUST00000063588 Rtl1Q7M732 1744 aa20.68■□□□□ 0.9
Vamp1-202ENSMUST00000063588 Ccdc180J3QNE4 1664 aa20.38■□□□□ 0.85
Vamp1-202ENSMUST00000063588 Kdm5dQ62240 1548 aa20.35■□□□□ 0.85
Vamp1-202ENSMUST00000063588 NacadQ5SWP3 1504 aa20.31■□□□□ 0.84
Vamp1-202ENSMUST00000063588 Rb1cc1Q9ESK9 1588 aa20.3■□□□□ 0.84
Vamp1-202ENSMUST00000063588 Baz1aO88379 1555 aa20.1■□□□□ 0.81
Vamp1-202ENSMUST00000063588 Crybg2B7ZCC2 1516 aa19.94■□□□□ 0.78
Vamp1-202ENSMUST00000063588 Sycp2Q9CUU3 1500 aa19.86■□□□□ 0.77
Vamp1-202ENSMUST00000063588 Zcchc6Q5BLK4 1491 aaKnown RBP19.8■□□□□ 0.76
Vamp1-202ENSMUST00000063588 Smarca2Q6DIC0 1577 aa19.61■□□□□ 0.73
Vamp1-202ENSMUST00000063588 BicraF8VPZ9 1578 aa19.43■□□□□ 0.7
Vamp1-202ENSMUST00000063588 Ccdc136Q3TVA9 1136 aa19.28■□□□□ 0.68
Vamp1-202ENSMUST00000063588 Trim41Q5NCC3 630 aa19.15■□□□□ 0.66
Vamp1-202ENSMUST00000063588 Brd4Q9ESU6 1400 aaKnown RBP19.08■□□□□ 0.64
Vamp1-202ENSMUST00000063588 HrcG5E8J6 738 aa19.08■□□□□ 0.64
Vamp1-202ENSMUST00000063588 Cecr2E9Q2Z1 1453 aa19.06■□□□□ 0.64
Vamp1-202ENSMUST00000063588 Smarca4Q3TKT4 1613 aaKnown RBP18.94■□□□□ 0.62
Vamp1-202ENSMUST00000063588 Synj1Q8CHC4 1574 aa18.91■□□□□ 0.62
Vamp1-202ENSMUST00000063588 Cttnbp2B9EJA2 1648 aa18.89■□□□□ 0.61
Vamp1-202ENSMUST00000063588 CftrP26361 1476 aa18.85■□□□□ 0.61
Vamp1-202ENSMUST00000063588 Golga3P55937 1487 aa18.72■□□□□ 0.59
Vamp1-202ENSMUST00000063588 Atad2bE9Q166 1460 aaKnown RBP18.71■□□□□ 0.59
Vamp1-202ENSMUST00000063588 Iqgap2Q3UQ44 1575 aa18.69■□□□□ 0.58
Vamp1-202ENSMUST00000063588 Pds5bQ4VA53 1446 aaKnown RBP18.69■□□□□ 0.58
Vamp1-202ENSMUST00000063588 Top2bQ64511 1612 aa18.66■□□□□ 0.58
Vamp1-202ENSMUST00000063588 Cep164Q5DU05 1446 aa18.64■□□□□ 0.57
Vamp1-202ENSMUST00000063588 Cngb1E1AZ71 1325 aa18.52■□□□□ 0.56
Vamp1-202ENSMUST00000063588 Esf1Q3V1V3 845 aaKnown RBP18.49■□□□□ 0.55
Vamp1-202ENSMUST00000063588 Rsf1E9PWW9 1441 aaKnown RBP18.46■□□□□ 0.55
Vamp1-202ENSMUST00000063588 Ccdc88bQ4QRL3 1481 aa18.4■□□□□ 0.54
Vamp1-202ENSMUST00000063588 Cc2d2aQ8CFW7 1633 aa18.39■□□□□ 0.53
Vamp1-202ENSMUST00000063588 Wdr62Q3U3T8 1523 aa18.39■□□□□ 0.53
Vamp1-202ENSMUST00000063588 Fmn1Q05860 1466 aa18.35■□□□□ 0.53
Vamp1-202ENSMUST00000063588 Chic1Q8CBW7 227 aa18.33■□□□□ 0.53
Vamp1-202ENSMUST00000063588 Frmpd1A2AKB4 1549 aa18.33■□□□□ 0.52
Vamp1-202ENSMUST00000063588 Ercc6F8VPZ5 1481 aa18.32■□□□□ 0.52
Vamp1-202ENSMUST00000063588 Unc13aQ4KUS2 1712 aa18.25■□□□□ 0.51
Vamp1-202ENSMUST00000063588 TnnQ80Z71 1560 aa18.23■□□□□ 0.51
Vamp1-202ENSMUST00000063588 Thoc2B1AZI6 1594 aaKnown RBP18.22■□□□□ 0.51
Vamp1-202ENSMUST00000063588 Top2aQ01320 1528 aaKnown RBP18.19■□□□□ 0.5
Vamp1-202ENSMUST00000063588 Lamc3Q9R0B6 1581 aa18.15■□□□□ 0.5
Vamp1-202ENSMUST00000063588 Rpgrip1Q9EPQ2 1331 aa18.11■□□□□ 0.49
Vamp1-202ENSMUST00000063588 Phldb1Q6PDH0 1371 aaKnown RBP18.02■□□□□ 0.48
Vamp1-202ENSMUST00000063588 Rapgef2Q8CHG7 1496 aa18.01■□□□□ 0.47
Vamp1-202ENSMUST00000063588 Gab3Q8BSM5 595 aa18.01■□□□□ 0.47
Vamp1-202ENSMUST00000063588 Fam135aQ6NS59 1506 aa18■□□□□ 0.47
Vamp1-202ENSMUST00000063588 Kif15Q6P9L6 1387 aa17.94■□□□□ 0.46
Vamp1-202ENSMUST00000063588 Camsap1A2AHC3 1581 aa17.91■□□□□ 0.46
Vamp1-202ENSMUST00000063588 Baz1bQ9Z277 1479 aa17.89■□□□□ 0.45
Vamp1-202ENSMUST00000063588 Eif4g1Q6NZJ6 1600 aaKnown RBP17.85■□□□□ 0.45
Vamp1-202ENSMUST00000063588 Acin1Q9JIX8 1338 aaKnown RBP17.84■□□□□ 0.45
Vamp1-202ENSMUST00000063588 Ccdc18Q640L5 1455 aa17.83■□□□□ 0.44
Vamp1-202ENSMUST00000063588 Cep162Q6ZQ06 1403 aa17.82■□□□□ 0.44
Vamp1-202ENSMUST00000063588 NrkQ9R0G8 1455 aa17.79■□□□□ 0.44
Vamp1-202ENSMUST00000063588 Ubl4bQ9CQ84 188 aa17.75■□□□□ 0.43
Vamp1-202ENSMUST00000063588 Ehmt2Q9Z148 1263 aaKnown RBP17.75■□□□□ 0.43
Vamp1-202ENSMUST00000063588 Shroom4Q1W617 1475 aa17.73■□□□□ 0.43
Vamp1-202ENSMUST00000063588 Cux2P70298 1426 aa17.73■□□□□ 0.43
Vamp1-202ENSMUST00000063588 Grin2bQ01097 1482 aa17.72■□□□□ 0.43
Vamp1-202ENSMUST00000063588 Dnajc5bQ9CQ94 199 aa17.69■□□□□ 0.42
Vamp1-202ENSMUST00000063588 Npm2Q80W85 207 aa17.66■□□□□ 0.42
Vamp1-202ENSMUST00000063588 PtprkP35822 1457 aa17.66■□□□□ 0.42
Vamp1-202ENSMUST00000063588 Map3k1P53349 1493 aa17.64■□□□□ 0.41
Vamp1-202ENSMUST00000063588 Arhgap35Q91YM2 1499 aa17.63■□□□□ 0.41
Vamp1-202ENSMUST00000063588 Il27Q8K3I6 234 aa17.61■□□□□ 0.41
Vamp1-202ENSMUST00000063588 Npm1Q61937 292 aaKnown RBP17.59■□□□□ 0.41
Vamp1-202ENSMUST00000063588 LrpprcQ6PB66 1392 aaKnown RBP17.57■□□□□ 0.4
Vamp1-202ENSMUST00000063588 Efcab5A0JP43 1406 aa17.57■□□□□ 0.4
Vamp1-202ENSMUST00000063588 PogzQ8BZH4 1409 aaKnown RBP17.55■□□□□ 0.4
Vamp1-202ENSMUST00000063588 Mrc2Q64449 1479 aa17.54■□□□□ 0.4
Vamp1-202ENSMUST00000063588 Mroh2bQ7M6Y6 1581 aa17.54■□□□□ 0.4
Vamp1-202ENSMUST00000063588 AqrQ8CFQ3 1481 aaKnown RBP17.52■□□□□ 0.39
Vamp1-202ENSMUST00000063588 Myt1lP97500 1187 aa17.5■□□□□ 0.39
Vamp1-202ENSMUST00000063588 Duox2A2AQ99 1517 aa17.5■□□□□ 0.39
Vamp1-202ENSMUST00000063588 Kif21aQ9QXL2 1672 aa17.46■□□□□ 0.39
Vamp1-202ENSMUST00000063588 Clip1Q922J3 1391 aa17.45■□□□□ 0.38
Vamp1-202ENSMUST00000063588 Erich3F6QRE9 1637 aa17.42■□□□□ 0.38
Vamp1-202ENSMUST00000063588 Crocc2F6XLV1 1638 aa17.42■□□□□ 0.38
Vamp1-202ENSMUST00000063588 Dhx29Q6PGC1 1365 aaKnown RBP17.42■□□□□ 0.38
Vamp1-202ENSMUST00000063588 Eea1Q8BL66 1411 aa17.4■□□□□ 0.38
Vamp1-202ENSMUST00000063588 Samd9lQ69Z37 1561 aa17.38■□□□□ 0.37
Vamp1-202ENSMUST00000063588 SynmQ70IV5 1561 aa17.38■□□□□ 0.37
Vamp1-202ENSMUST00000063588 Carmil1Q6EDY6 1374 aa17.36■□□□□ 0.37
Vamp1-202ENSMUST00000063588 Ankrd26Q811D2 1581 aa17.33■□□□□ 0.37
Vamp1-202ENSMUST00000063588 Polr1aO35134 1717 aaKnown RBP17.33■□□□□ 0.36
Vamp1-202ENSMUST00000063588 Arhgef5E9Q7D5 1581 aa17.33■□□□□ 0.36
Vamp1-202ENSMUST00000063588 Zeb1Q64318 1117 aa17.32■□□□□ 0.36
Vamp1-202ENSMUST00000063588 Arap1Q4LDD4 1452 aa17.32■□□□□ 0.36
Vamp1-202ENSMUST00000063588 Setd5Q5XJV7 1441 aa17.3■□□□□ 0.36
Vamp1-202ENSMUST00000063588 Lmo7E9PYF4 1699 aaKnown RBP17.27■□□□□ 0.35
Vamp1-202ENSMUST00000063588 Rpap1Q80TE0 1409 aa17.24■□□□□ 0.35
Vamp1-202ENSMUST00000063588 Mier1Q5UAK0 511 aa17.23■□□□□ 0.35
Vamp1-202ENSMUST00000063588 Tiam1Q60610 1591 aa17.23■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms