RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Ighv1-62-1A0A075B5U3 116 aa7.45□□□□□ -1.22
Limch1-201ENSMUST00000038188 Igkv1-35A0A0G2JDE5 120 aa7.45□□□□□ -1.22
Limch1-201ENSMUST00000038188 Rnf152Q8BG47 203 aa7.45□□□□□ -1.22
Limch1-201ENSMUST00000038188 PcntP48725 2898 aa7.44□□□□□ -1.22
Limch1-201ENSMUST00000038188 Rpl37aP61514 92 aa7.44□□□□□ -1.22
Limch1-201ENSMUST00000038188 Trav14-1A0A0G2JF94 121 aa7.44□□□□□ -1.22
Limch1-201ENSMUST00000038188 Xcl1P47993 114 aa7.44□□□□□ -1.22
Limch1-201ENSMUST00000038188 Rpl39lQ9CQD0 51 aa7.43□□□□□ -1.22
Limch1-201ENSMUST00000038188 Ighv2-9-1A0A075B697 116 aa7.43□□□□□ -1.22
Limch1-201ENSMUST00000038188 Gm9805F6YK59 57 aa7.43□□□□□ -1.22
Limch1-201ENSMUST00000038188 1700010B08RikQ9DAI7 102 aa7.43□□□□□ -1.22
Limch1-201ENSMUST00000038188 MturnQ8CGA4 131 aa7.42□□□□□ -1.22
Limch1-201ENSMUST00000038188 BB014433Q8C5R5 389 aa7.42□□□□□ -1.22
Limch1-201ENSMUST00000038188 Igkv1-117A0A140T8M0 119 aa7.42□□□□□ -1.22
Limch1-201ENSMUST00000038188 Zfand2bQ91X58 257 aa7.42□□□□□ -1.22
Limch1-201ENSMUST00000038188 Gm42674D3YUT9 64 aa7.41□□□□□ -1.22
Limch1-201ENSMUST00000038188 Cdc42se2Q8BGH7 84 aa7.41□□□□□ -1.22
Limch1-201ENSMUST00000038188 Rtl10D3YWW5 146 aa7.41□□□□□ -1.22
Limch1-201ENSMUST00000038188 Gm10642Q3TWM1 71 aa7.41□□□□□ -1.22
Limch1-201ENSMUST00000038188 TeppQ6IMH0 216 aa7.41□□□□□ -1.22
Limch1-201ENSMUST00000038188 Lama3Q61789 3330 aa7.41□□□□□ -1.22
Limch1-201ENSMUST00000038188 Ighv10-1A0A0B4J1J6 119 aa7.4□□□□□ -1.22
Limch1-201ENSMUST00000038188 Smlr1J3QMJ4 66 aa7.4□□□□□ -1.22
Limch1-201ENSMUST00000038188 Gm16223Q8CBM3 117 aa7.4□□□□□ -1.22
Limch1-201ENSMUST00000038188 Gm36176A0A1W2P8D5 158 aa7.4□□□□□ -1.23
Limch1-201ENSMUST00000038188 Znf414Q9DCK4 299 aa7.4□□□□□ -1.23
Limch1-201ENSMUST00000038188 Vpreb1P13372 142 aa7.4□□□□□ -1.23
Limch1-201ENSMUST00000038188 Trav4d-3A0A075B625 110 aa7.39□□□□□ -1.23
Limch1-201ENSMUST00000038188 6430550D23RikE9Q1X6 194 aa7.39□□□□□ -1.23
Limch1-201ENSMUST00000038188 A830005F24RikQ8BRT5 167 aa7.39□□□□□ -1.23
Limch1-201ENSMUST00000038188 Cd300eQ8K249 196 aa7.39□□□□□ -1.23
Limch1-201ENSMUST00000038188 Ntn5Q3UQ22 452 aa7.39□□□□□ -1.23
Limch1-201ENSMUST00000038188 Defa23Q5G866 93 aa7.39□□□□□ -1.23
Limch1-201ENSMUST00000038188 Snhg11Q4G0K9 87 aa7.39□□□□□ -1.23
Limch1-201ENSMUST00000038188 Psmb11Q8BG41 302 aa7.39□□□□□ -1.23
Limch1-201ENSMUST00000038188 Cep192E9Q4Y4 2514 aaKnown RBP7.39□□□□□ -1.23
Limch1-201ENSMUST00000038188 Dnah12Q3V0Q1 3086 aa7.39□□□□□ -1.23
Limch1-201ENSMUST00000038188 Igkv3-7A0A0G2JE31 119 aa7.38□□□□□ -1.23
Limch1-201ENSMUST00000038188 Hist2h2beQ64524 126 aa7.38□□□□□ -1.23
Limch1-201ENSMUST00000038188 E130208F15RikQ3UPV3 143 aa7.38□□□□□ -1.23
Limch1-201ENSMUST00000038188 Ccl17F6R5P4 103 aa7.37□□□□□ -1.23
Limch1-201ENSMUST00000038188 Cox7bP56393 80 aa7.37□□□□□ -1.23
Limch1-201ENSMUST00000038188 Igkv1-110A0A0B4J1I0 119 aa7.37□□□□□ -1.23
Limch1-201ENSMUST00000038188 Trav12d-3A0A075B6A4 115 aa7.36□□□□□ -1.23
Limch1-201ENSMUST00000038188 ScxQ64124 207 aa7.36□□□□□ -1.23
Limch1-201ENSMUST00000038188 Gm10837Q3UTT8 145 aa7.36□□□□□ -1.23
Limch1-201ENSMUST00000038188 Myo18bE9PV66 2605 aa7.35□□□□□ -1.23
Limch1-201ENSMUST00000038188 Igkv8-19A0A0G2JFN8 121 aa7.35□□□□□ -1.23
Limch1-201ENSMUST00000038188 Krtap27-1E9PX37 202 aa7.35□□□□□ -1.23
Limch1-201ENSMUST00000038188 Wfdc6bF6ULY1 148 aa7.35□□□□□ -1.23
Limch1-201ENSMUST00000038188 Gm10322F7D7I4 111 aa7.35□□□□□ -1.23
Limch1-201ENSMUST00000038188 Odf3l2Q3TZ65 277 aa7.35□□□□□ -1.23
Limch1-201ENSMUST00000038188 SrarpQ3ULG3 163 aa7.35□□□□□ -1.23
Limch1-201ENSMUST00000038188 Dscaml1Q4VA61 2053 aa7.35□□□□□ -1.23
Limch1-201ENSMUST00000038188 Ube2d4D3YUH6 135 aa7.34□□□□□ -1.23
Limch1-201ENSMUST00000038188 Tal2Q62282 108 aa7.33□□□□□ -1.24
Limch1-201ENSMUST00000038188 Defb40Q70KL2 73 aa7.33□□□□□ -1.24
Limch1-201ENSMUST00000038188 Usp24B1AY13 2617 aaKnown RBP7.33□□□□□ -1.24
Limch1-201ENSMUST00000038188 Plscr4P58196 326 aa7.33□□□□□ -1.24
Limch1-201ENSMUST00000038188 Prune2Q52KR3 3084 aa7.33□□□□□ -1.24
Limch1-201ENSMUST00000038188 Ighv1-62-2A0A0A6YXZ4 119 aa7.33□□□□□ -1.24
Limch1-201ENSMUST00000038188 Znf664Q4VA44 261 aa7.33□□□□□ -1.24
Limch1-201ENSMUST00000038188 AplnQ9R0R4 77 aa7.33□□□□□ -1.24
Limch1-201ENSMUST00000038188 PolqQ8CGS6 2544 aa7.33□□□□□ -1.24
Limch1-201ENSMUST00000038188 Usp9yF8VPU6 2556 aa7.33□□□□□ -1.24
Limch1-201ENSMUST00000038188 Trav12-3A0A075B648 115 aa7.32□□□□□ -1.24
Limch1-201ENSMUST00000038188 TrioQ0KL02 3102 aa7.32□□□□□ -1.24
Limch1-201ENSMUST00000038188 P01819 144 aa7.31□□□□□ -1.24
Limch1-201ENSMUST00000038188 A730009L09RikA0A1B0GS82 72 aa7.31□□□□□ -1.24
Limch1-201ENSMUST00000038188 Vpreb3D3Z6J4 130 aa7.31□□□□□ -1.24
Limch1-201ENSMUST00000038188 Gm17349F7BGH6 99 aa7.31□□□□□ -1.24
Limch1-201ENSMUST00000038188 Gm5468Q8C3D3 155 aa7.31□□□□□ -1.24
Limch1-201ENSMUST00000038188 Polr2kQ63871 58 aa7.31□□□□□ -1.24
Limch1-201ENSMUST00000038188 Cd33Q63994 403 aa7.31□□□□□ -1.24
Limch1-201ENSMUST00000038188 Plac8Q9JI48 112 aa7.3□□□□□ -1.24
Limch1-201ENSMUST00000038188 AW011738F6S7Q2 159 aa7.3□□□□□ -1.24
Limch1-201ENSMUST00000038188 AngP21570 145 aa7.3□□□□□ -1.24
Limch1-201ENSMUST00000038188 NpyP57774 97 aa7.29□□□□□ -1.24
Limch1-201ENSMUST00000038188 Rbm3O89086 153 aaKnown RBP7.29□□□□□ -1.24
Limch1-201ENSMUST00000038188 Phf5aP83870 110 aaKnown RBP7.29□□□□□ -1.24
Limch1-201ENSMUST00000038188 Q9DAQ5 155 aa7.29□□□□□ -1.24
Limch1-201ENSMUST00000038188 Naa38Q9D2U5 125 aa7.29□□□□□ -1.24
Limch1-201ENSMUST00000038188 Gm10295Q8CCF3 114 aa7.28□□□□□ -1.24
Limch1-201ENSMUST00000038188 Fam19a3Q7TPG6 132 aa7.28□□□□□ -1.24
Limch1-201ENSMUST00000038188 SptssbQ925E8 76 aa7.28□□□□□ -1.24
Limch1-201ENSMUST00000038188 Itpr1P11881 2749 aa7.28□□□□□ -1.24
Limch1-201ENSMUST00000038188 AI606181Q8C7B9 129 aa7.28□□□□□ -1.24
Limch1-201ENSMUST00000038188 Defa27F2Z403 93 aa7.27□□□□□ -1.25
Limch1-201ENSMUST00000038188 Gpr15lA0A0B4J1N3 78 aa7.27□□□□□ -1.25
Limch1-201ENSMUST00000038188 Gm11565A2A4M7 156 aa7.26□□□□□ -1.25
Limch1-201ENSMUST00000038188 H2al1nQ497L1 109 aa7.26□□□□□ -1.25
Limch1-201ENSMUST00000038188 Crip2Q9DCT8 208 aaKnown RBP7.26□□□□□ -1.25
Limch1-201ENSMUST00000038188 Iglc1A0A0G2JE99 106 aa7.25□□□□□ -1.25
Limch1-201ENSMUST00000038188 Gm44965A0A0N4SVR3 59 aa7.25□□□□□ -1.25
Limch1-201ENSMUST00000038188 Gm5617Q91VN2 117 aa7.25□□□□□ -1.25
Limch1-201ENSMUST00000038188 Gm7173A0A0G2JEB6 3132 aa7.24□□□□□ -1.25
Limch1-201ENSMUST00000038188 Trav3-1Q5R1I8 114 aa7.24□□□□□ -1.25
Limch1-201ENSMUST00000038188 B430305J03RikQ8BQQ8 176 aa7.24□□□□□ -1.25
Limch1-201ENSMUST00000038188 C130032M10RikQ8C888 123 aa7.24□□□□□ -1.25
Limch1-201ENSMUST00000038188 Nsd1O88491 2588 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 165 ms