RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Igkv1-117A0A140T8M0 119 aa10.8□□□□□ -0.68
Usp4-201ENSMUST00000035237 Lelp1Q9DAE3 120 aa10.8□□□□□ -0.68
Usp4-201ENSMUST00000035237 Igkv1-99F6XWB2 120 aa10.8□□□□□ -0.68
Usp4-201ENSMUST00000035237 Defb26Q30KN7 186 aa10.8□□□□□ -0.68
Usp4-201ENSMUST00000035237 E130218I03RikA0A0U1RNU5 63 aa10.8□□□□□ -0.68
Usp4-201ENSMUST00000035237 Bri3P28662 125 aa10.8□□□□□ -0.68
Usp4-201ENSMUST00000035237 Rpl39lQ9CQD0 51 aa10.79□□□□□ -0.68
Usp4-201ENSMUST00000035237 Gm9913Q8BQQ2 135 aa10.78□□□□□ -0.68
Usp4-201ENSMUST00000035237 Cox6b1P56391 86 aaKnown RBP10.78□□□□□ -0.68
Usp4-201ENSMUST00000035237 Rpl18aP62717 176 aaKnown RBP10.78□□□□□ -0.68
Usp4-201ENSMUST00000035237 Zfp462B1AWL2 2495 aaKnown RBP10.78□□□□□ -0.68
Usp4-201ENSMUST00000035237 Gm9195A0A140LHT4 2805 aa10.77□□□□□ -0.68
Usp4-201ENSMUST00000035237 Samd13D3YUG0 102 aa10.77□□□□□ -0.68
Usp4-201ENSMUST00000035237 Plac8l1Q08EJ0 177 aa10.77□□□□□ -0.68
Usp4-201ENSMUST00000035237 GfyJ3KML8 504 aa10.77□□□□□ -0.69
Usp4-201ENSMUST00000035237 Tmem86bQ497J1 226 aa10.77□□□□□ -0.69
Usp4-201ENSMUST00000035237 Csdc2Q91YQ3 154 aa10.77□□□□□ -0.69
Usp4-201ENSMUST00000035237 Cmya5Q70KF4 3739 aa10.77□□□□□ -0.69
Usp4-201ENSMUST00000035237 Rpl28P41105 137 aaKnown RBP10.77□□□□□ -0.69
Usp4-201ENSMUST00000035237 Ppp1r32Q148A4 427 aa10.76□□□□□ -0.69
Usp4-201ENSMUST00000035237 Brk1Q91VR8 75 aa10.76□□□□□ -0.69
Usp4-201ENSMUST00000035237 Tmem254aP0DN89 123 aa10.76□□□□□ -0.69
Usp4-201ENSMUST00000035237 Tmem254bP0DN90 123 aa10.76□□□□□ -0.69
Usp4-201ENSMUST00000035237 Tmem254cP0DN91 123 aa10.76□□□□□ -0.69
Usp4-201ENSMUST00000035237 4930518I15RikQ3V2W7 57 aa10.76□□□□□ -0.69
Usp4-201ENSMUST00000035237 2010109I03RikQ9CQ11 111 aa10.76□□□□□ -0.69
Usp4-201ENSMUST00000035237 Ubl5Q9EPV8 73 aa10.76□□□□□ -0.69
Usp4-201ENSMUST00000035237 Gm3443F7CCV5 94 aa10.76□□□□□ -0.69
Usp4-201ENSMUST00000035237 Igkv8-16A0A0G2JDG9 121 aa10.75□□□□□ -0.69
Usp4-201ENSMUST00000035237 Lamtor3O88653 124 aa10.75□□□□□ -0.69
Usp4-201ENSMUST00000035237 Vmo1Q5SXG7 201 aa10.75□□□□□ -0.69
Usp4-201ENSMUST00000035237 GhrhP16043 103 aa10.74□□□□□ -0.69
Usp4-201ENSMUST00000035237 Gm10549Q3URY4 149 aa10.74□□□□□ -0.69
Usp4-201ENSMUST00000035237 4930546C10RikE9Q4Y3 121 aa10.73□□□□□ -0.69
Usp4-201ENSMUST00000035237 Rnase1P00683 149 aa10.73□□□□□ -0.69
Usp4-201ENSMUST00000035237 EnhoQ8K1D8 76 aa10.73□□□□□ -0.69
Usp4-201ENSMUST00000035237 Serp2Q6TAW2 65 aa10.72□□□□□ -0.69
Usp4-201ENSMUST00000035237 Defa27F2Z403 93 aa10.72□□□□□ -0.69
Usp4-201ENSMUST00000035237 ScxQ64124 207 aa10.72□□□□□ -0.69
Usp4-201ENSMUST00000035237 Leap2Q91V13 76 aa10.72□□□□□ -0.69
Usp4-201ENSMUST00000035237 Chd6A3KFM7 2711 aa10.72□□□□□ -0.69
Usp4-201ENSMUST00000035237 Reg3dQ9QUS9 175 aa10.72□□□□□ -0.69
Usp4-201ENSMUST00000035237 Muc4Q8JZM8 3443 aa10.71□□□□□ -0.69
Usp4-201ENSMUST00000035237 Igkv8-24A0A140T8P5 121 aa10.71□□□□□ -0.7
Usp4-201ENSMUST00000035237 7530416G11RikJ3QJX6 159 aa10.7□□□□□ -0.7
Usp4-201ENSMUST00000035237 Defb42Q8BVB5 75 aa10.7□□□□□ -0.7
Usp4-201ENSMUST00000035237 Gm10518F6UQQ9 182 aa10.7□□□□□ -0.7
Usp4-201ENSMUST00000035237 BikO70337 150 aa10.69□□□□□ -0.7
Usp4-201ENSMUST00000035237 Gm5142Q8C5X9 133 aa10.69□□□□□ -0.7
Usp4-201ENSMUST00000035237 Tfpi2O35536 230 aa10.69□□□□□ -0.7
Usp4-201ENSMUST00000035237 Defb18Q30KP5 85 aa10.68□□□□□ -0.7
Usp4-201ENSMUST00000035237 Tm2d2Q8R0I4 213 aa10.68□□□□□ -0.7
Usp4-201ENSMUST00000035237 Ormdl1Q921I0 153 aa10.68□□□□□ -0.7
Usp4-201ENSMUST00000035237 Fam19a1Q7TPG8 133 aa10.67□□□□□ -0.7
Usp4-201ENSMUST00000035237 Epg5Q80TA9 2572 aa10.67□□□□□ -0.7
Usp4-201ENSMUST00000035237 TrrapQ80YV3 2565 aaKnown RBP10.66□□□□□ -0.7
Usp4-201ENSMUST00000035237 Wfdc12Q9JHY3 85 aa10.66□□□□□ -0.7
Usp4-201ENSMUST00000035237 Klk11Q9QYN3 276 aa10.66□□□□□ -0.7
Usp4-201ENSMUST00000035237 Utp20Q5XG71 2788 aaKnown RBP10.66□□□□□ -0.7
Usp4-201ENSMUST00000035237 Gm8439G3UWA7 96 aa10.65□□□□□ -0.7
Usp4-201ENSMUST00000035237 Chd9Q8BYH8 2885 aa10.65□□□□□ -0.7
Usp4-201ENSMUST00000035237 A830031A19RikQ8BNT5 113 aa10.65□□□□□ -0.7
Usp4-201ENSMUST00000035237 Tmem223Q9CQE2 199 aaKnown RBP10.65□□□□□ -0.7
Usp4-201ENSMUST00000035237 Zfand2aQ9JII7 171 aa10.64□□□□□ -0.71
Usp4-201ENSMUST00000035237 FlncQ8VHX6 2726 aaKnown RBP10.64□□□□□ -0.71
Usp4-201ENSMUST00000035237 PrcdQ00LT2 53 aa10.64□□□□□ -0.71
Usp4-201ENSMUST00000035237 Tmem258P61166 79 aa10.63□□□□□ -0.71
Usp4-201ENSMUST00000035237 Gm10845Q3UNY9 185 aa10.63□□□□□ -0.71
Usp4-201ENSMUST00000035237 Igkv8-18A0A0B4J1J3 123 aa10.63□□□□□ -0.71
Usp4-201ENSMUST00000035237 CrygaP04345 174 aa10.63□□□□□ -0.71
Usp4-201ENSMUST00000035237 Igkv4-58A0A0G2JGI6 119 aa10.63□□□□□ -0.71
Usp4-201ENSMUST00000035237 Pla2g1bQ9Z0Y2 146 aa10.62□□□□□ -0.71
Usp4-201ENSMUST00000035237 Itpr3P70227 2670 aa10.61□□□□□ -0.71
Usp4-201ENSMUST00000035237 Inafm2A0A1L1STD6 152 aa10.61□□□□□ -0.71
Usp4-201ENSMUST00000035237 SmcpP15265 143 aa10.61□□□□□ -0.71
Usp4-201ENSMUST00000035237 Trbv13-2A0A140T8N6 113 aa10.61□□□□□ -0.71
Usp4-201ENSMUST00000035237 Trav9n-4A0A075B631 113 aa10.61□□□□□ -0.71
Usp4-201ENSMUST00000035237 Igkv4-61A0A0G2JH00 117 aa10.61□□□□□ -0.71
Usp4-201ENSMUST00000035237 Lyrm9Q3UN90 78 aa10.6□□□□□ -0.71
Usp4-201ENSMUST00000035237 Mrpl55Q9CZ83 127 aa10.6□□□□□ -0.71
Usp4-201ENSMUST00000035237 Igkv3-9A0A140T8P4 119 aa10.6□□□□□ -0.71
Usp4-201ENSMUST00000035237 Q8R092 253 aa10.59□□□□□ -0.71
Usp4-201ENSMUST00000035237 Ighv1-56A0A0A6YXG2 117 aa10.58□□□□□ -0.72
Usp4-201ENSMUST00000035237 Ifitm6A0A1B0GS75 124 aa10.58□□□□□ -0.72
Usp4-201ENSMUST00000035237 MobpQ9D2P8 170 aa10.57□□□□□ -0.72
Usp4-201ENSMUST00000035237 Pet100P0DJE0 76 aa10.57□□□□□ -0.72
Usp4-201ENSMUST00000035237 Ube2d4D3YUH6 135 aa10.56□□□□□ -0.72
Usp4-201ENSMUST00000035237 Ccl21aP84444 133 aa10.56□□□□□ -0.72
Usp4-201ENSMUST00000035237 Ccl21bP86792 133 aa10.56□□□□□ -0.72
Usp4-201ENSMUST00000035237 Ccl21cP86793 133 aa10.56□□□□□ -0.72
Usp4-201ENSMUST00000035237 Chchd7Q8K2Q5 85 aa10.55□□□□□ -0.72
Usp4-201ENSMUST00000035237 Fam19a5Q91WE9 132 aa10.55□□□□□ -0.72
Usp4-201ENSMUST00000035237 4930519P11RikQ9CUJ8 166 aa10.55□□□□□ -0.72
Usp4-201ENSMUST00000035237 SnurfQ9WU12 71 aa10.55□□□□□ -0.72
Usp4-201ENSMUST00000035237 Nf1Q04690 2841 aa10.55□□□□□ -0.72
Usp4-201ENSMUST00000035237 Igkv8-26A0A075B5N5 123 aa10.55□□□□□ -0.72
Usp4-201ENSMUST00000035237 Igkv1-88A0A140T8N1 120 aa10.55□□□□□ -0.72
Usp4-201ENSMUST00000035237 Defa28D3Z1V9 94 aa10.55□□□□□ -0.72
Usp4-201ENSMUST00000035237 Rbm3O89086 153 aaKnown RBP10.55□□□□□ -0.72
Usp4-201ENSMUST00000035237 FlnaQ8BTM8 2647 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms