RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Defa27F2Z403 93 aa9.51□□□□□ -0.89
Vps35-201ENSMUST00000034131 Ormdl1Q921I0 153 aa9.51□□□□□ -0.89
Vps35-201ENSMUST00000034131 Igkv1-99F6XWB2 120 aa9.51□□□□□ -0.89
Vps35-201ENSMUST00000034131 Plac8l1Q08EJ0 177 aa9.51□□□□□ -0.89
Vps35-201ENSMUST00000034131 Rpl39lQ9CQD0 51 aa9.51□□□□□ -0.89
Vps35-201ENSMUST00000034131 Trav13-1A0A075B644 110 aa9.51□□□□□ -0.89
Vps35-201ENSMUST00000034131 Ighv2-9-1A0A075B697 116 aa9.51□□□□□ -0.89
Vps35-201ENSMUST00000034131 Fhl2O70433 279 aa9.5□□□□□ -0.89
Vps35-201ENSMUST00000034131 Gm10845Q3UNY9 185 aa9.5□□□□□ -0.89
Vps35-201ENSMUST00000034131 LrbaQ9ESE1 2856 aa9.5□□□□□ -0.89
Vps35-201ENSMUST00000034131 Igkv2-109A0A075B5K6 120 aa9.5□□□□□ -0.89
Vps35-201ENSMUST00000034131 A930009A15RikG3UYI6 118 aa9.49□□□□□ -0.89
Vps35-201ENSMUST00000034131 Gm5142Q8C5X9 133 aa9.49□□□□□ -0.89
Vps35-201ENSMUST00000034131 Igkv4-53A0A0G2JFC6 119 aa9.49□□□□□ -0.89
Vps35-201ENSMUST00000034131 Lce6aD3YV94 81 aa9.49□□□□□ -0.89
Vps35-201ENSMUST00000034131 Serp1Q9Z1W5 66 aa9.49□□□□□ -0.89
Vps35-201ENSMUST00000034131 Fam110dQ80X91 271 aa9.48□□□□□ -0.89
Vps35-201ENSMUST00000034131 Ube2e2Q91W82 201 aa9.48□□□□□ -0.89
Vps35-201ENSMUST00000034131 Q9DAA7 145 aa9.48□□□□□ -0.89
Vps35-201ENSMUST00000034131 Trbv30A0A0B4J1P1 111 aa9.48□□□□□ -0.89
Vps35-201ENSMUST00000034131 Q99M08 65 aa9.48□□□□□ -0.89
Vps35-201ENSMUST00000034131 Ppp1r32Q148A4 427 aa9.48□□□□□ -0.89
Vps35-201ENSMUST00000034131 Pet100P0DJE0 76 aa9.47□□□□□ -0.89
Vps35-201ENSMUST00000034131 Crlf1Q9JM58 425 aa9.47□□□□□ -0.89
Vps35-201ENSMUST00000034131 Hectd1Q69ZR2 2618 aaKnown RBP9.47□□□□□ -0.89
Vps35-201ENSMUST00000034131 Trav13d-4A0A0G2JFX3 110 aa9.47□□□□□ -0.89
Vps35-201ENSMUST00000034131 Ighv1-49A0A0A6YWX2 117 aa9.47□□□□□ -0.89
Vps35-201ENSMUST00000034131 Gm10308Q9CVR5 141 aa9.46□□□□□ -0.89
Vps35-201ENSMUST00000034131 Igkv8-21A0A140T8P7 120 aa9.46□□□□□ -0.9
Vps35-201ENSMUST00000034131 Dph3Q8K0W9 82 aa9.46□□□□□ -0.9
Vps35-201ENSMUST00000034131 Rnf152Q8BG47 203 aa9.46□□□□□ -0.9
Vps35-201ENSMUST00000034131 Fam229bQ8CF36 80 aa9.46□□□□□ -0.9
Vps35-201ENSMUST00000034131 Trav9d-3A0A075B695 113 aa9.45□□□□□ -0.9
Vps35-201ENSMUST00000034131 Defb33Q30KN3 62 aa9.45□□□□□ -0.9
Vps35-201ENSMUST00000034131 E130208F15RikQ3UPV3 143 aa9.45□□□□□ -0.9
Vps35-201ENSMUST00000034131 Zfand2aQ9JII7 171 aa9.45□□□□□ -0.9
Vps35-201ENSMUST00000034131 Defb50Q6TU36 73 aa9.44□□□□□ -0.9
Vps35-201ENSMUST00000034131 Chd9Q8BYH8 2885 aa9.44□□□□□ -0.9
Vps35-201ENSMUST00000034131 CnbpP53996 178 aaKnown RBP9.44□□□□□ -0.9
Vps35-201ENSMUST00000034131 Inafm2A0A1L1STD6 152 aa9.43□□□□□ -0.9
Vps35-201ENSMUST00000034131 Ighv10-3A0A075B5T6 119 aa9.42□□□□□ -0.9
Vps35-201ENSMUST00000034131 Ighv1-59A0A0A6YXE0 117 aa9.42□□□□□ -0.9
Vps35-201ENSMUST00000034131 Klk12B2RVZ0 247 aa9.42□□□□□ -0.9
Vps35-201ENSMUST00000034131 Rbm3O89086 153 aaKnown RBP9.42□□□□□ -0.9
Vps35-201ENSMUST00000034131 CrygaP04345 174 aa9.42□□□□□ -0.9
Vps35-201ENSMUST00000034131 Pkd1l2Q7TN88 2461 aa9.42□□□□□ -0.9
Vps35-201ENSMUST00000034131 Gm21994F6T2D2 329 aa9.41□□□□□ -0.9
Vps35-201ENSMUST00000034131 Rpl35aO55142 110 aa9.41□□□□□ -0.9
Vps35-201ENSMUST00000034131 Trbv13-2A0A140T8N6 113 aa9.41□□□□□ -0.9
Vps35-201ENSMUST00000034131 Ndufc1Q9CQY9 76 aa9.41□□□□□ -0.9
Vps35-201ENSMUST00000034131 Lrrk2Q5S006 2527 aa9.41□□□□□ -0.9
Vps35-201ENSMUST00000034131 H2al1bA0A087WP11 105 aa9.4□□□□□ -0.9
Vps35-201ENSMUST00000034131 H2al1kJ3QP08 105 aa9.4□□□□□ -0.9
Vps35-201ENSMUST00000034131 Lamtor3O88653 124 aa9.4□□□□□ -0.9
Vps35-201ENSMUST00000034131 H2al1eQ810S6 105 aa9.4□□□□□ -0.9
Vps35-201ENSMUST00000034131 H2al1mQ9DAD9 105 aa9.4□□□□□ -0.9
Vps35-201ENSMUST00000034131 Gm9903Q8C9Y8 129 aa9.4□□□□□ -0.9
Vps35-201ENSMUST00000034131 Tomm7Q9D173 55 aa9.4□□□□□ -0.9
Vps35-201ENSMUST00000034131 Nop10Q9CQS2 64 aa9.4□□□□□ -0.91
Vps35-201ENSMUST00000034131 Defa28D3Z1V9 94 aa9.39□□□□□ -0.91
Vps35-201ENSMUST00000034131 NbeaQ9EPN1 2936 aa9.39□□□□□ -0.91
Vps35-201ENSMUST00000034131 Ighv1-58A0A075B5W9 117 aa9.39□□□□□ -0.91
Vps35-201ENSMUST00000034131 Gm37389A0A0A6YW05 95 aa9.39□□□□□ -0.91
Vps35-201ENSMUST00000034131 Gm5153P01627 120 aa9.39□□□□□ -0.91
Vps35-201ENSMUST00000034131 Fam19a3Q7TPG6 132 aa9.39□□□□□ -0.91
Vps35-201ENSMUST00000034131 Ubr5Q80TP3 2792 aa9.38□□□□□ -0.91
Vps35-201ENSMUST00000034131 A530084C06RikQ3UTW2 186 aa9.38□□□□□ -0.91
Vps35-201ENSMUST00000034131 Cox7a1P56392 80 aa9.38□□□□□ -0.91
Vps35-201ENSMUST00000034131 Igkv8-26A0A075B5N5 123 aa9.37□□□□□ -0.91
Vps35-201ENSMUST00000034131 Igkv8-18A0A0B4J1J3 123 aa9.37□□□□□ -0.91
Vps35-201ENSMUST00000034131 Ptpn13Q64512 2453 aa9.37□□□□□ -0.91
Vps35-201ENSMUST00000034131 Igkv8-27A0A0G2JF28 120 aa9.37□□□□□ -0.91
Vps35-201ENSMUST00000034131 Igkv8-30A0A140T8M3 121 aa9.37□□□□□ -0.91
Vps35-201ENSMUST00000034131 PspnO70300 156 aa9.37□□□□□ -0.91
Vps35-201ENSMUST00000034131 MobpQ9D2P8 170 aa9.37□□□□□ -0.91
Vps35-201ENSMUST00000034131 Rif1Q6PR54 2419 aaKnown RBP9.37□□□□□ -0.91
Vps35-201ENSMUST00000034131 Ttc28Q80XJ3 2450 aa9.36□□□□□ -0.91
Vps35-201ENSMUST00000034131 Pou2af1Q64693 256 aa9.36□□□□□ -0.91
Vps35-201ENSMUST00000034131 4930556J24RikQ9D4U7 146 aa9.36□□□□□ -0.91
Vps35-201ENSMUST00000034131 Trav13-2A0A075B649 110 aa9.36□□□□□ -0.91
Vps35-201ENSMUST00000034131 Vpreb2P13373 142 aa9.35□□□□□ -0.91
Vps35-201ENSMUST00000034131 Wnk1P83741 2377 aa9.35□□□□□ -0.91
Vps35-201ENSMUST00000034131 Gm11213A0A1B0GR83 88 aa9.35□□□□□ -0.91
Vps35-201ENSMUST00000034131 Odf3l2Q3TZ65 277 aa9.35□□□□□ -0.91
Vps35-201ENSMUST00000034131 Gcn1E9PVA8 2671 aaKnown RBP9.35□□□□□ -0.91
Vps35-201ENSMUST00000034131 Gm7257D3YX25 99 aa9.34□□□□□ -0.91
Vps35-201ENSMUST00000034131 Ighv2-9A0A075B5Q5 116 aa9.33□□□□□ -0.92
Vps35-201ENSMUST00000034131 Ucn2Q99ML8 113 aa9.33□□□□□ -0.92
Vps35-201ENSMUST00000034131 Igkv1-110A0A0B4J1I0 119 aa9.33□□□□□ -0.92
Vps35-201ENSMUST00000034131 Tcl1b3P56842 122 aa9.33□□□□□ -0.92
Vps35-201ENSMUST00000034131 Igkv4-58A0A0G2JGI6 119 aa9.32□□□□□ -0.92
Vps35-201ENSMUST00000034131 Gm10772F7AIG4 85 aa9.32□□□□□ -0.92
Vps35-201ENSMUST00000034131 Spink8Q09TK9 105 aa9.32□□□□□ -0.92
Vps35-201ENSMUST00000034131 Higd2aQ9CQJ1 106 aa9.32□□□□□ -0.92
Vps35-201ENSMUST00000034131 Bean1Q9EQG5 255 aa9.31□□□□□ -0.92
Vps35-201ENSMUST00000034131 Ighv2-5A0A0A6YY69 116 aa9.3□□□□□ -0.92
Vps35-201ENSMUST00000034131 Gm17689B3GLJ4 109 aa9.3□□□□□ -0.92
Vps35-201ENSMUST00000034131 PrlhG3UWC3 86 aa9.3□□□□□ -0.92
Vps35-201ENSMUST00000034131 UqcrqQ9CQ69 82 aa9.3□□□□□ -0.92
Vps35-201ENSMUST00000034131 OtoglF7A4A7 2325 aa9.3□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms