RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Rpgrip1Q9EPQ2 1331 aa23.13■■□□□ 1.29
Vps35-201ENSMUST00000034131 NischQ80TM9 1593 aa22.83■■□□□ 1.24
Vps35-201ENSMUST00000034131 Rhox8Q6VSS7 320 aa22.59■■□□□ 1.21
Vps35-201ENSMUST00000034131 Rtl1Q7M732 1744 aa22.36■■□□□ 1.17
Vps35-201ENSMUST00000034131 Acin1Q9JIX8 1338 aaKnown RBP22.3■■□□□ 1.16
Vps35-201ENSMUST00000034131 Ccdc180J3QNE4 1664 aa22.28■■□□□ 1.16
Vps35-201ENSMUST00000034131 Gm35339A0A140LHH9 1649 aa22.15■■□□□ 1.14
Vps35-201ENSMUST00000034131 Abcc9P70170 1546 aa22.09■■□□□ 1.13
Vps35-201ENSMUST00000034131 Pcgf6Q99NA9 353 aa21.99■■□□□ 1.11
Vps35-201ENSMUST00000034131 Ehmt2Q9Z148 1263 aaKnown RBP21.89■■□□□ 1.09
Vps35-201ENSMUST00000034131 Dcaf1Q80TR8 1506 aa21.39■■□□□ 1.02
Vps35-201ENSMUST00000034131 Abcc8B2RUS7 1588 aa21.36■■□□□ 1.01
Vps35-201ENSMUST00000034131 Zcchc6Q5BLK4 1491 aaKnown RBP21.35■■□□□ 1.01
Vps35-201ENSMUST00000034131 Supt5hO55201 1082 aaKnown RBP21.33■■□□□ 1.01
Vps35-201ENSMUST00000034131 HrcG5E8J6 738 aa21.32■■□□□ 1
Vps35-201ENSMUST00000034131 Trim41Q5NCC3 630 aa21.21■□□□□ 0.99
Vps35-201ENSMUST00000034131 Neurod1Q60867 357 aa21.2■□□□□ 0.98
Vps35-201ENSMUST00000034131 Las1lA2BE28 776 aaKnown RBP21.19■□□□□ 0.98
Vps35-201ENSMUST00000034131 Ccdc136Q3TVA9 1136 aa20.81■□□□□ 0.92
Vps35-201ENSMUST00000034131 Zeb1Q64318 1117 aa20.81■□□□□ 0.92
Vps35-201ENSMUST00000034131 1700123L14RikQ3V2K7 440 aa20.7■□□□□ 0.9
Vps35-201ENSMUST00000034131 Cngb1E1AZ71 1325 aa20.64■□□□□ 0.9
Vps35-201ENSMUST00000034131 Myt1Q8CFC2 1127 aa20.61■□□□□ 0.89
Vps35-201ENSMUST00000034131 CenpbP27790 599 aa20.59■□□□□ 0.89
Vps35-201ENSMUST00000034131 Anks4bQ8K3X6 423 aa20.58■□□□□ 0.89
Vps35-201ENSMUST00000034131 NefmP08553 848 aa20.56■□□□□ 0.88
Vps35-201ENSMUST00000034131 Csrnp3P59055 597 aa20.55■□□□□ 0.88
Vps35-201ENSMUST00000034131 Sall2Q9QX96 1004 aa20.51■□□□□ 0.87
Vps35-201ENSMUST00000034131 ScribQ80U72 1612 aa20.43■□□□□ 0.86
Vps35-201ENSMUST00000034131 Cep164Q5DU05 1446 aa20.32■□□□□ 0.84
Vps35-201ENSMUST00000034131 Aplp2Q06335 707 aa20.3■□□□□ 0.84
Vps35-201ENSMUST00000034131 Mier1Q5UAK0 511 aa20.28■□□□□ 0.84
Vps35-201ENSMUST00000034131 Cdk11bP24788 784 aaKnown RBP20.21■□□□□ 0.83
Vps35-201ENSMUST00000034131 Wdr66E9Q743 1299 aa20.19■□□□□ 0.82
Vps35-201ENSMUST00000034131 Nop58Q6DFW4 536 aaKnown RBP20.12■□□□□ 0.81
Vps35-201ENSMUST00000034131 DiexfQ8BTT6 772 aaKnown RBP20.1■□□□□ 0.81
Vps35-201ENSMUST00000034131 Gab3Q8BSM5 595 aa20.09■□□□□ 0.81
Vps35-201ENSMUST00000034131 Rb1cc1Q9ESK9 1588 aa20.05■□□□□ 0.8
Vps35-201ENSMUST00000034131 Gm38655A0A286YDK6 273 aa19.98■□□□□ 0.79
Vps35-201ENSMUST00000034131 Aebp2Q9Z248 504 aaKnown RBP19.96■□□□□ 0.79
Vps35-201ENSMUST00000034131 ClspnQ80YR7 1315 aa19.93■□□□□ 0.78
Vps35-201ENSMUST00000034131 Ppargc1bQ8VHJ7 1014 aa19.85■□□□□ 0.77
Vps35-201ENSMUST00000034131 Kdm5dQ62240 1548 aa19.85■□□□□ 0.77
Vps35-201ENSMUST00000034131 NacadQ5SWP3 1504 aa19.84■□□□□ 0.77
Vps35-201ENSMUST00000034131 Chic1Q8CBW7 227 aa19.84■□□□□ 0.77
Vps35-201ENSMUST00000034131 Baz1aO88379 1555 aa19.81■□□□□ 0.76
Vps35-201ENSMUST00000034131 Bcl11aQ9QYE3 773 aa19.81■□□□□ 0.76
Vps35-201ENSMUST00000034131 UbtfP25976 765 aaKnown RBP19.74■□□□□ 0.75
Vps35-201ENSMUST00000034131 Rsf1E9PWW9 1441 aaKnown RBP19.73■□□□□ 0.75
Vps35-201ENSMUST00000034131 Fam71e1A1L3C1 212 aa19.66■□□□□ 0.74
Vps35-201ENSMUST00000034131 TonslQ6NZL6 1363 aa19.57■□□□□ 0.72
Vps35-201ENSMUST00000034131 Tnnt3Q9QZ47 272 aa19.54■□□□□ 0.72
Vps35-201ENSMUST00000034131 Mapk8ip2Q9ERE9 830 aa19.5■□□□□ 0.71
Vps35-201ENSMUST00000034131 SafbD3YXK2 937 aaKnown RBP19.47■□□□□ 0.71
Vps35-201ENSMUST00000034131 Hnrnpul2Q00PI9 745 aaKnown RBP19.45■□□□□ 0.7
Vps35-201ENSMUST00000034131 Ccdc88bQ4QRL3 1481 aa19.45■□□□□ 0.7
Vps35-201ENSMUST00000034131 Sycp2Q9CUU3 1500 aa19.43■□□□□ 0.7
Vps35-201ENSMUST00000034131 Smarca2Q6DIC0 1577 aa19.4■□□□□ 0.7
Vps35-201ENSMUST00000034131 Anp32aO35381 247 aa19.3■□□□□ 0.68
Vps35-201ENSMUST00000034131 Golga3P55937 1487 aa19.26■□□□□ 0.67
Vps35-201ENSMUST00000034131 PrkcshO08795 521 aa19.26■□□□□ 0.67
Vps35-201ENSMUST00000034131 Ap3b1Q9Z1T1 1105 aa19.24■□□□□ 0.67
Vps35-201ENSMUST00000034131 Rtl5Q5DTT4 599 aa19.22■□□□□ 0.67
Vps35-201ENSMUST00000034131 Brd4Q9ESU6 1400 aaKnown RBP19.21■□□□□ 0.67
Vps35-201ENSMUST00000034131 Ifnlr1Q8CGK5 535 aa19.2■□□□□ 0.66
Vps35-201ENSMUST00000034131 Crybg2B7ZCC2 1516 aa19.19■□□□□ 0.66
Vps35-201ENSMUST00000034131 Pelp1Q9DBD5 1123 aaKnown RBP19.19■□□□□ 0.66
Vps35-201ENSMUST00000034131 Myt1lP97500 1187 aa19.16■□□□□ 0.66
Vps35-201ENSMUST00000034131 Esf1Q3V1V3 845 aaKnown RBP19.16■□□□□ 0.66
Vps35-201ENSMUST00000034131 BicraF8VPZ9 1578 aa19.12■□□□□ 0.65
Vps35-201ENSMUST00000034131 Stra8P70278 393 aa19.12■□□□□ 0.65
Vps35-201ENSMUST00000034131 Plekhg3Q4VAC9 1341 aa19■□□□□ 0.63
Vps35-201ENSMUST00000034131 Amer1Q7TS75 1132 aa18.98■□□□□ 0.63
Vps35-201ENSMUST00000034131 Eid3Q3V124 375 aa18.98■□□□□ 0.63
Vps35-201ENSMUST00000034131 Znf710Q3U288 666 aa18.97■□□□□ 0.63
Vps35-201ENSMUST00000034131 Nolc1E9Q5C9 702 aaKnown RBP18.96■□□□□ 0.63
Vps35-201ENSMUST00000034131 Calr4Q3TQS0 420 aa18.96■□□□□ 0.63
Vps35-201ENSMUST00000034131 Rapgef2Q8CHG7 1496 aa18.93■□□□□ 0.62
Vps35-201ENSMUST00000034131 Clip1Q922J3 1391 aa18.88■□□□□ 0.61
Vps35-201ENSMUST00000034131 Npm2Q80W85 207 aa18.88■□□□□ 0.61
Vps35-201ENSMUST00000034131 Supt16hQ920B9 1047 aa18.86■□□□□ 0.61
Vps35-201ENSMUST00000034131 Cep162Q6ZQ06 1403 aa18.85■□□□□ 0.61
Vps35-201ENSMUST00000034131 Ncapd3Q6ZQK0 1506 aa18.84■□□□□ 0.61
Vps35-201ENSMUST00000034131 Cecr2E9Q2Z1 1453 aa18.84■□□□□ 0.61
Vps35-201ENSMUST00000034131 Synj1Q8CHC4 1574 aa18.82■□□□□ 0.6
Vps35-201ENSMUST00000034131 Ttbk1Q6PCN3 1308 aa18.79■□□□□ 0.6
Vps35-201ENSMUST00000034131 NclP09405 707 aaKnown RBP18.78■□□□□ 0.6
Vps35-201ENSMUST00000034131 Ppp4r2Q0VGB7 417 aa18.74■□□□□ 0.59
Vps35-201ENSMUST00000034131 Rpap1Q80TE0 1409 aa18.74■□□□□ 0.59
Vps35-201ENSMUST00000034131 Hdac5Q9Z2V6 1113 aa18.72■□□□□ 0.59
Vps35-201ENSMUST00000034131 Slc24a1Q91WD8 1130 aa18.71■□□□□ 0.59
Vps35-201ENSMUST00000034131 Wdr43Q6ZQL4 677 aaKnown RBP18.7■□□□□ 0.58
Vps35-201ENSMUST00000034131 Top2bQ64511 1612 aa18.69■□□□□ 0.58
Vps35-201ENSMUST00000034131 CftrP26361 1476 aa18.65■□□□□ 0.58
Vps35-201ENSMUST00000034131 Pds5bQ4VA53 1446 aaKnown RBP18.6■□□□□ 0.57
Vps35-201ENSMUST00000034131 Upf2A2AT37 1269 aaKnown RBP18.6■□□□□ 0.57
Vps35-201ENSMUST00000034131 Eif5bQ05D44 1216 aaKnown RBP18.59■□□□□ 0.57
Vps35-201ENSMUST00000034131 Ccdc27Q3V036 639 aa18.58■□□□□ 0.56
Vps35-201ENSMUST00000034131 Cc2d2aQ8CFW7 1633 aa18.57■□□□□ 0.56
Vps35-201ENSMUST00000034131 Washc2Q6PGL7 1334 aa18.55■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 51.8 ms