RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Prrc2cQ3TLH4 2846 aaKnown RBP6.16□□□□□ -1.42
Upf3b-201ENSMUST00000076265 Svep1A2AVA0 3567 aa6.16□□□□□ -1.42
Upf3b-201ENSMUST00000076265 Ighv5-12-4A0A0A6YWG4 117 aa6.15□□□□□ -1.42
Upf3b-201ENSMUST00000076265 Xcl1P47993 114 aa6.15□□□□□ -1.42
Upf3b-201ENSMUST00000076265 Ankhd1E9PUR0 2548 aaKnown RBP6.15□□□□□ -1.42
Upf3b-201ENSMUST00000076265 Trav9-1A0A075B601 112 aa6.15□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Ighv1-9A0A0A6YW37 117 aa6.15□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Trbv29A0A0G2LB96 114 aa6.15□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Ube2d4D3YUH6 135 aa6.15□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Ccl20O89093 97 aa6.15□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Camk2n2Q78WH7 79 aa6.15□□□□□ -1.43
Upf3b-201ENSMUST00000076265 4930595D18RikD3Z642 64 aa6.14□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Gm7102J3QQ10 178 aa6.14□□□□□ -1.43
Upf3b-201ENSMUST00000076265 BglapP86546 95 aa6.14□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Bglap2P86547 95 aa6.14□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Tff3Q62395 81 aa6.14□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Cdc42se1Q8BHL7 80 aa6.14□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Eddm3bQ8K0E4 149 aa6.14□□□□□ -1.43
Upf3b-201ENSMUST00000076265 P18527 97 aa6.14□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Rpl36aP83882 106 aaKnown RBP6.14□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Trav4-3A0A0B4J1K1 110 aa6.13□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Gm37988J3QM41 62 aa6.13□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Syngr2O55101 224 aa6.13□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Limd2Q8BGB5 128 aa6.13□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Lyg1Q9D7Q0 197 aa6.13□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Map1aQ9QYR6 2776 aa6.13□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Ighv1-49A0A0A6YWX2 117 aa6.13□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Igkv1-35A0A0G2JDE5 120 aa6.13□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Lect2O88803 151 aa6.11□□□□□ -1.43
Upf3b-201ENSMUST00000076265 SrarpQ3ULG3 163 aa6.11□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Zfp273Q7M6W8 501 aa6.11□□□□□ -1.43
Upf3b-201ENSMUST00000076265 B230307C23RikQ8BLB2 64 aa6.11□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Defb6Q91VD6 63 aa6.11□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Ighv3-3A0A0A6YWL2 116 aa6.11□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Smim4Q8C1Q6 80 aa6.11□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Sdf2l1Q9ESP1 221 aa6.11□□□□□ -1.43
Upf3b-201ENSMUST00000076265 NacaP70670 2187 aaKnown RBP6.11□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Ncoa6Q9JL19 2067 aa6.11□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Gm8888J3QPX5 126 aa6.1□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Lelp1Q9DAE3 120 aa6.1□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Il1f10Q8R459 152 aa6.1□□□□□ -1.43
Upf3b-201ENSMUST00000076265 OtogO55225 2910 aa6.09□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Tomm5B1AXP6 51 aa6.09□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Nhp2Q9CRB2 153 aaKnown RBP6.09□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Igkv3-1A0A075B5P1 119 aa6.09□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Igkv13-85A0A075B666 115 aa6.09□□□□□ -1.43
Upf3b-201ENSMUST00000076265 CrpP14847 225 aa6.09□□□□□ -1.43
Upf3b-201ENSMUST00000076265 S100a3P62818 101 aa6.09□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Cst6Q9D1B1 149 aa6.09□□□□□ -1.43
Upf3b-201ENSMUST00000076265 Ankrd17Q99NH0 2603 aaKnown RBP6.08□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Rnase6Q9D244 153 aa6.08□□□□□ -1.44
Upf3b-201ENSMUST00000076265 MNCb-2875Q9DCB3 74 aa6.08□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Ros1Q78DX7 2340 aa6.08□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Med13lQ6JPI3 2207 aa6.08□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Igfn1Q3KNY0 2849 aa6.08□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Rmi2Q3UPE3 149 aa6.08□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Hes3Q61657 175 aa6.08□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Zfp420Q7TMN8 578 aa6.08□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Igkv3-4A0A140T8Q4 119 aa6.07□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Dido1Q8C9B9 2256 aaKnown RBP6.07□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Trav7-6A0A075B640 112 aa6.07□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Inafm1E9PV59 130 aa6.07□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Ccl22O88430 92 aa6.06□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Sostdc1Q9CQN4 206 aa6.06□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Gm9999Q8C5Y2 53 aa6.05□□□□□ -1.44
Upf3b-201ENSMUST00000076265 RhohQ9D3G9 191 aa6.05□□□□□ -1.44
Upf3b-201ENSMUST00000076265 MtorQ9JLN9 2549 aa6.05□□□□□ -1.44
Upf3b-201ENSMUST00000076265 9130230L23RikQ8CC80 163 aa6.05□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Krtap3-1A2A591 98 aa6.04□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Gm11444F6QMA6 170 aa6.04□□□□□ -1.44
Upf3b-201ENSMUST00000076265 FlnaQ8BTM8 2647 aaKnown RBP6.04□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Ighv5-15A0A0A6YWC7 117 aa6.04□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Rpl28P41105 137 aaKnown RBP6.04□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Wfdc18P62810 74 aa6.04□□□□□ -1.44
Upf3b-201ENSMUST00000076265 CadB2RQC6 2225 aa6.04□□□□□ -1.44
Upf3b-201ENSMUST00000076265 SlpiP97430 131 aa6.03□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Znf575Q3TXZ1 239 aa6.03□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Ly6g5cQ8K1T5 149 aa6.03□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Igkv5-37A0A140T8N4 115 aa6.03□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Ube2d1P61080 147 aaKnown RBP6.03□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Q8VC23 124 aa6.03□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Abca2P41234 2434 aa6.03□□□□□ -1.44
Upf3b-201ENSMUST00000076265 Ank2Q8C8R3 3898 aa6.02□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Trav6d-3A0A075B6B3 112 aa6.02□□□□□ -1.45
Upf3b-201ENSMUST00000076265 P03980 138 aa6.02□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Trav6-3Q5R1E6 112 aa6.02□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Mrpl35Q9CQL6 188 aa6.02□□□□□ -1.45
Upf3b-201ENSMUST00000076265 4930519P11RikQ9CUJ8 166 aa6.02□□□□□ -1.45
Upf3b-201ENSMUST00000076265 HampQ9EQ21 83 aa6.02□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Ighv2-7A0A075B5Q8 116 aa6.01□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Nmes1Q810Q5 83 aa6.01□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Trav4n-4A0A075B615 110 aa6□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Gm29666A0A087WQ99 126 aa6□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Trbv13-3A0A0B4J1H2 113 aa6□□□□□ -1.45
Upf3b-201ENSMUST00000076265 BikO70337 150 aa6□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Odf3l2Q3TZ65 277 aa6□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Arhgap32Q811P8 2089 aa6□□□□□ -1.45
Upf3b-201ENSMUST00000076265 CicQ924A2 2510 aa6□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Igkv14-126A0A075B5K0 117 aa6□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Gm28557A0A087WQQ0 336 aa6□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 136.9 ms