Protein–RNA interactions for Protein: A0A0A6YWG4

Ighv5-12-4, Immunoglobulin heavy variable 5-12-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv5-12-4A0A0A6YWG4 Gm25239-201ENSMUST00000174915 86 ntBASIC29.28■■■□□ 2.28
Ighv5-12-4A0A0A6YWG4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ighv5-12-4A0A0A6YWG4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ighv5-12-4A0A0A6YWG4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Ighv5-12-4A0A0A6YWG4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ighv5-12-4A0A0A6YWG4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ighv5-12-4A0A0A6YWG4 Gm15042-201ENSMUST00000120212 883 ntBASIC26.09■■□□□ 1.77
Ighv5-12-4A0A0A6YWG4 Psd-208ENSMUST00000224556 2034 ntBASIC25.92■■□□□ 1.74
Ighv5-12-4A0A0A6YWG4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ighv5-12-4A0A0A6YWG4 Gm15045-201ENSMUST00000117359 883 ntBASIC25.6■■□□□ 1.69
Ighv5-12-4A0A0A6YWG4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ighv5-12-4A0A0A6YWG4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ighv5-12-4A0A0A6YWG4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.3■■□□□ 1.64
Ighv5-12-4A0A0A6YWG4 Gm24109-201ENSMUST00000175489 103 ntBASIC25.13■■□□□ 1.61
Ighv5-12-4A0A0A6YWG4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ighv5-12-4A0A0A6YWG4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ighv5-12-4A0A0A6YWG4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ighv5-12-4A0A0A6YWG4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ighv5-12-4A0A0A6YWG4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ighv5-12-4A0A0A6YWG4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ighv5-12-4A0A0A6YWG4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ighv5-12-4A0A0A6YWG4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ighv5-12-4A0A0A6YWG4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
Ighv5-12-4A0A0A6YWG4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ighv5-12-4A0A0A6YWG4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ighv5-12-4A0A0A6YWG4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ighv5-12-4A0A0A6YWG4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.62■■□□□ 1.53
Ighv5-12-4A0A0A6YWG4 Gm23366-201ENSMUST00000175022 89 ntBASIC24.54■■□□□ 1.52
Ighv5-12-4A0A0A6YWG4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ighv5-12-4A0A0A6YWG4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ighv5-12-4A0A0A6YWG4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ighv5-12-4A0A0A6YWG4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ighv5-12-4A0A0A6YWG4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.39■■□□□ 1.49
Ighv5-12-4A0A0A6YWG4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ighv5-12-4A0A0A6YWG4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ighv5-12-4A0A0A6YWG4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ighv5-12-4A0A0A6YWG4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ighv5-12-4A0A0A6YWG4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ighv5-12-4A0A0A6YWG4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ighv5-12-4A0A0A6YWG4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Ighv5-12-4A0A0A6YWG4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.97■■□□□ 1.43
Ighv5-12-4A0A0A6YWG4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.97■■□□□ 1.43
Ighv5-12-4A0A0A6YWG4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ighv5-12-4A0A0A6YWG4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.85■■□□□ 1.41
Ighv5-12-4A0A0A6YWG4 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.79■■□□□ 1.4
Ighv5-12-4A0A0A6YWG4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ighv5-12-4A0A0A6YWG4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ighv5-12-4A0A0A6YWG4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Ighv5-12-4A0A0A6YWG4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ighv5-12-4A0A0A6YWG4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Ighv5-12-4A0A0A6YWG4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ighv5-12-4A0A0A6YWG4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ighv5-12-4A0A0A6YWG4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ighv5-12-4A0A0A6YWG4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ighv5-12-4A0A0A6YWG4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.26■■□□□ 1.31
Ighv5-12-4A0A0A6YWG4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ighv5-12-4A0A0A6YWG4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ighv5-12-4A0A0A6YWG4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.19■■□□□ 1.3
Ighv5-12-4A0A0A6YWG4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Ighv5-12-4A0A0A6YWG4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ighv5-12-4A0A0A6YWG4 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.13■■□□□ 1.29
Ighv5-12-4A0A0A6YWG4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ighv5-12-4A0A0A6YWG4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
Ighv5-12-4A0A0A6YWG4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.12■■□□□ 1.29
Ighv5-12-4A0A0A6YWG4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ighv5-12-4A0A0A6YWG4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ighv5-12-4A0A0A6YWG4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23■■□□□ 1.27
Ighv5-12-4A0A0A6YWG4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ighv5-12-4A0A0A6YWG4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ighv5-12-4A0A0A6YWG4 Gm27325-201ENSMUST00000175467 74 ntBASIC22.98■■□□□ 1.27
Ighv5-12-4A0A0A6YWG4 Gm25238-201ENSMUST00000174914 89 ntBASIC22.95■■□□□ 1.26
Ighv5-12-4A0A0A6YWG4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.9■■□□□ 1.26
Ighv5-12-4A0A0A6YWG4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
Ighv5-12-4A0A0A6YWG4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Ighv5-12-4A0A0A6YWG4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ighv5-12-4A0A0A6YWG4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ighv5-12-4A0A0A6YWG4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ighv5-12-4A0A0A6YWG4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ighv5-12-4A0A0A6YWG4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Ighv5-12-4A0A0A6YWG4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ighv5-12-4A0A0A6YWG4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.75■■□□□ 1.23
Ighv5-12-4A0A0A6YWG4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ighv5-12-4A0A0A6YWG4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ighv5-12-4A0A0A6YWG4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ighv5-12-4A0A0A6YWG4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ighv5-12-4A0A0A6YWG4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ighv5-12-4A0A0A6YWG4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ighv5-12-4A0A0A6YWG4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ighv5-12-4A0A0A6YWG4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ighv5-12-4A0A0A6YWG4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ighv5-12-4A0A0A6YWG4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ighv5-12-4A0A0A6YWG4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
Ighv5-12-4A0A0A6YWG4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ighv5-12-4A0A0A6YWG4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ighv5-12-4A0A0A6YWG4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ighv5-12-4A0A0A6YWG4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.52■■□□□ 1.2
Ighv5-12-4A0A0A6YWG4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Ighv5-12-4A0A0A6YWG4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ighv5-12-4A0A0A6YWG4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ighv5-12-4A0A0A6YWG4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms