RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Ucn2Q99ML8 113 aa13.84□□□□□ -0.19
Upf1-201ENSMUST00000075666 Gm2916Q9D9B9 127 aa13.84□□□□□ -0.19
Upf1-201ENSMUST00000075666 BC025920Q3US60 128 aa13.83□□□□□ -0.19
Upf1-201ENSMUST00000075666 Tmem223Q9CQE2 199 aaKnown RBP13.83□□□□□ -0.19
Upf1-201ENSMUST00000075666 4930535I16RikQ9CUI2 172 aa13.83□□□□□ -0.19
Upf1-201ENSMUST00000075666 Ighv1-63A0A075B5X2 117 aa13.83□□□□□ -0.2
Upf1-201ENSMUST00000075666 1700011M02RikB1AX35 88 aa13.83□□□□□ -0.2
Upf1-201ENSMUST00000075666 Vpreb1P13372 142 aa13.83□□□□□ -0.2
Upf1-201ENSMUST00000075666 Ighv13-2A0A0A6YWN3 119 aa13.82□□□□□ -0.2
Upf1-201ENSMUST00000075666 Col4a4Q9QZR9 1682 aa13.82□□□□□ -0.2
Upf1-201ENSMUST00000075666 Igkv3-2A0A075B5P0 119 aa13.81□□□□□ -0.2
Upf1-201ENSMUST00000075666 4930432M17RikQ3V0W9 174 aa13.81□□□□□ -0.2
Upf1-201ENSMUST00000075666 Tm2d2Q8R0I4 213 aa13.81□□□□□ -0.2
Upf1-201ENSMUST00000075666 ColqO35348 457 aa13.8□□□□□ -0.2
Upf1-201ENSMUST00000075666 Rif1Q6PR54 2419 aaKnown RBP13.8□□□□□ -0.2
Upf1-201ENSMUST00000075666 C2cd3Q52KB6 2323 aa13.8□□□□□ -0.2
Upf1-201ENSMUST00000075666 Abca2P41234 2434 aa13.8□□□□□ -0.2
Upf1-201ENSMUST00000075666 Nav3Q80TN7 2359 aa13.8□□□□□ -0.2
Upf1-201ENSMUST00000075666 CrygdP04342 174 aa13.79□□□□□ -0.2
Upf1-201ENSMUST00000075666 Fam110dQ80X91 271 aa13.79□□□□□ -0.2
Upf1-201ENSMUST00000075666 Igkv8-34A0A0G2JDU0 121 aa13.79□□□□□ -0.2
Upf1-201ENSMUST00000075666 PlaurP35456 327 aa13.79□□□□□ -0.2
Upf1-201ENSMUST00000075666 Mrpl52Q9D0Y8 121 aa13.79□□□□□ -0.2
Upf1-201ENSMUST00000075666 Usp9xP70398 2559 aaKnown RBP13.79□□□□□ -0.2
Upf1-201ENSMUST00000075666 Gm10509O88255 85 aa13.79□□□□□ -0.2
Upf1-201ENSMUST00000075666 Fhl2O70433 279 aa13.78□□□□□ -0.2
Upf1-201ENSMUST00000075666 Vpreb2P13373 142 aa13.78□□□□□ -0.2
Upf1-201ENSMUST00000075666 TeppQ6IMH0 216 aa13.78□□□□□ -0.2
Upf1-201ENSMUST00000075666 Pkd1l2Q7TN88 2461 aa13.78□□□□□ -0.2
Upf1-201ENSMUST00000075666 Ube2d4D3YUH6 135 aa13.77□□□□□ -0.2
Upf1-201ENSMUST00000075666 Pde6gP09174 87 aa13.77□□□□□ -0.2
Upf1-201ENSMUST00000075666 Ndufc1Q9CQY9 76 aa13.77□□□□□ -0.2
Upf1-201ENSMUST00000075666 Psmb11Q8BG41 302 aa13.77□□□□□ -0.21
Upf1-201ENSMUST00000075666 Gm10647E9Q8X0 124 aa13.77□□□□□ -0.21
Upf1-201ENSMUST00000075666 Igkv1-88A0A140T8N1 120 aa13.76□□□□□ -0.21
Upf1-201ENSMUST00000075666 Znf575Q3TXZ1 239 aa13.76□□□□□ -0.21
Upf1-201ENSMUST00000075666 Gm5464Q3UY29 175 aa13.76□□□□□ -0.21
Upf1-201ENSMUST00000075666 A830031A19RikQ8BNT5 113 aa13.76□□□□□ -0.21
Upf1-201ENSMUST00000075666 4930564D02RikQ9D4S4 103 aa13.76□□□□□ -0.21
Upf1-201ENSMUST00000075666 Myo9aQ8C170 2542 aa13.75□□□□□ -0.21
Upf1-201ENSMUST00000075666 Rnase1P00683 149 aa13.75□□□□□ -0.21
Upf1-201ENSMUST00000075666 P01755 137 aa13.75□□□□□ -0.21
Upf1-201ENSMUST00000075666 Ccl21aP84444 133 aa13.75□□□□□ -0.21
Upf1-201ENSMUST00000075666 Ccl21bP86792 133 aa13.75□□□□□ -0.21
Upf1-201ENSMUST00000075666 Ccl21cP86793 133 aa13.75□□□□□ -0.21
Upf1-201ENSMUST00000075666 4930524J08RikQ9CUJ5 163 aa13.75□□□□□ -0.21
Upf1-201ENSMUST00000075666 B230217C12RikE9Q3Z1 139 aa13.75□□□□□ -0.21
Upf1-201ENSMUST00000075666 SetxA2AKX3 2646 aa13.74□□□□□ -0.21
Upf1-201ENSMUST00000075666 Pla2g2aP31482 146 aa13.74□□□□□ -0.21
Upf1-201ENSMUST00000075666 Krtap27-1E9PX37 202 aa13.74□□□□□ -0.21
Upf1-201ENSMUST00000075666 Trav9n-4A0A075B631 113 aa13.73□□□□□ -0.21
Upf1-201ENSMUST00000075666 Defb12Q8K4N3 78 aa13.73□□□□□ -0.21
Upf1-201ENSMUST00000075666 2010109I03RikQ9CQ11 111 aa13.73□□□□□ -0.21
Upf1-201ENSMUST00000075666 Igkv8-18A0A0B4J1J3 123 aa13.72□□□□□ -0.21
Upf1-201ENSMUST00000075666 Igkv4-58A0A0G2JGI6 119 aa13.71□□□□□ -0.21
Upf1-201ENSMUST00000075666 Lce6aD3YV94 81 aa13.71□□□□□ -0.21
Upf1-201ENSMUST00000075666 Cdc42se2Q8BGH7 84 aa13.71□□□□□ -0.21
Upf1-201ENSMUST00000075666 Tcl1b3P56842 122 aa13.7□□□□□ -0.22
Upf1-201ENSMUST00000075666 Gm9913Q8BQQ2 135 aa13.7□□□□□ -0.22
Upf1-201ENSMUST00000075666 Defb18Q30KP5 85 aa13.7□□□□□ -0.22
Upf1-201ENSMUST00000075666 Ppp1r32Q148A4 427 aa13.7□□□□□ -0.22
Upf1-201ENSMUST00000075666 Hivep2Q3UHF7 2430 aa13.7□□□□□ -0.22
Upf1-201ENSMUST00000075666 Gm19935A0A1B0GSF9 52 aa13.7□□□□□ -0.22
Upf1-201ENSMUST00000075666 Rpl28P41105 137 aaKnown RBP13.7□□□□□ -0.22
Upf1-201ENSMUST00000075666 P01745 121 aa13.69□□□□□ -0.22
Upf1-201ENSMUST00000075666 Apoc4Q61268 124 aa13.69□□□□□ -0.22
Upf1-201ENSMUST00000075666 Igkv8-26A0A075B5N5 123 aa13.68□□□□□ -0.22
Upf1-201ENSMUST00000075666 PrlhG3UWC3 86 aa13.68□□□□□ -0.22
Upf1-201ENSMUST00000075666 Pip4p1Q3TWL2 284 aa13.68□□□□□ -0.22
Upf1-201ENSMUST00000075666 Prr13Q9CQJ5 137 aa13.68□□□□□ -0.22
Upf1-201ENSMUST00000075666 Rnf152Q8BG47 203 aa13.68□□□□□ -0.22
Upf1-201ENSMUST00000075666 3110070M22RikQ9DAQ7 118 aa13.67□□□□□ -0.22
Upf1-201ENSMUST00000075666 NrgnP60761 78 aa13.67□□□□□ -0.22
Upf1-201ENSMUST00000075666 Prr9Q8BV84 116 aa13.67□□□□□ -0.22
Upf1-201ENSMUST00000075666 Gm17577J3QNF7 156 aa13.65□□□□□ -0.22
Upf1-201ENSMUST00000075666 Shisa2Q8QZV2 295 aa13.65□□□□□ -0.22
Upf1-201ENSMUST00000075666 Camk2n2Q78WH7 79 aa13.65□□□□□ -0.22
Upf1-201ENSMUST00000075666 Cox7b2Q9D2H1 82 aa13.65□□□□□ -0.22
Upf1-201ENSMUST00000075666 Pou2af1Q64693 256 aa13.63□□□□□ -0.23
Upf1-201ENSMUST00000075666 Ufsp1Q9CZP0 217 aa13.63□□□□□ -0.23
Upf1-201ENSMUST00000075666 Hcfc1Q61191 2045 aaKnown RBP13.62□□□□□ -0.23
Upf1-201ENSMUST00000075666 Ighv10-1A0A0B4J1J6 119 aa13.62□□□□□ -0.23
Upf1-201ENSMUST00000075666 Gm9805F6YK59 57 aa13.62□□□□□ -0.23
Upf1-201ENSMUST00000075666 Pla2g2cP48076 150 aa13.62□□□□□ -0.23
Upf1-201ENSMUST00000075666 Gm10549Q3URY4 149 aa13.62□□□□□ -0.23
Upf1-201ENSMUST00000075666 Lama3Q61789 3330 aa13.61□□□□□ -0.23
Upf1-201ENSMUST00000075666 Gm9925F6T2U3 160 aa13.61□□□□□ -0.23
Upf1-201ENSMUST00000075666 SbsponQ3UPR9 264 aa13.61□□□□□ -0.23
Upf1-201ENSMUST00000075666 Ttc28Q80XJ3 2450 aa13.6□□□□□ -0.23
Upf1-201ENSMUST00000075666 Ly6gP35461 111 aa13.6□□□□□ -0.23
Upf1-201ENSMUST00000075666 Prr15lQ8JZM2 100 aa13.6□□□□□ -0.23
Upf1-201ENSMUST00000075666 Cfap54Q8C6S9 3106 aa13.59□□□□□ -0.23
Upf1-201ENSMUST00000075666 Tfpi2O35536 230 aa13.59□□□□□ -0.23
Upf1-201ENSMUST00000075666 Sslp1Q3UN54 99 aa13.59□□□□□ -0.23
Upf1-201ENSMUST00000075666 A930009A15RikG3UYI6 118 aa13.58□□□□□ -0.24
Upf1-201ENSMUST00000075666 Erdr1J3QMM0 206 aa13.58□□□□□ -0.24
Upf1-201ENSMUST00000075666 Chchd7Q8K2Q5 85 aa13.58□□□□□ -0.24
Upf1-201ENSMUST00000075666 Gm10845Q3UNY9 185 aa13.58□□□□□ -0.24
Upf1-201ENSMUST00000075666 Gm5142Q8C5X9 133 aa13.58□□□□□ -0.24
Upf1-201ENSMUST00000075666 Ube2bP63147 152 aa13.58□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 188.1 ms