RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 9230109A22RikQ8BHE6 111 aa9.16□□□□□ -0.94
Trim56-201ENSMUST00000054384 Ighv3-1A0A075B5S6 116 aa9.16□□□□□ -0.94
Trim56-201ENSMUST00000054384 Ighv2-7A0A075B5Q8 116 aa9.16□□□□□ -0.94
Trim56-201ENSMUST00000054384 BlcapP62951 87 aa9.16□□□□□ -0.94
Trim56-201ENSMUST00000054384 Defb13Q8R2I4 64 aa9.16□□□□□ -0.94
Trim56-201ENSMUST00000054384 Edn2P22389 175 aa9.16□□□□□ -0.94
Trim56-201ENSMUST00000054384 PtprqP0C5E4 2300 aa9.15□□□□□ -0.94
Trim56-201ENSMUST00000054384 Gm9913Q8BQQ2 135 aa9.15□□□□□ -0.94
Trim56-201ENSMUST00000054384 Gm10401E9Q3K6 71 aa9.15□□□□□ -0.94
Trim56-201ENSMUST00000054384 BC067074F6RXI4 2391 aa9.15□□□□□ -0.95
Trim56-201ENSMUST00000054384 Ntf4Q80VU4 209 aa9.14□□□□□ -0.95
Trim56-201ENSMUST00000054384 Sh2d1aO88890 126 aa9.14□□□□□ -0.95
Trim56-201ENSMUST00000054384 Gm28539A0A087WSL9 92 aa9.14□□□□□ -0.95
Trim56-201ENSMUST00000054384 P01729 129 aa9.14□□□□□ -0.95
Trim56-201ENSMUST00000054384 Gm14137Q8CE97 175 aa9.14□□□□□ -0.95
Trim56-201ENSMUST00000054384 Prr15lQ8JZM2 100 aa9.14□□□□□ -0.95
Trim56-201ENSMUST00000054384 Myo9aQ8C170 2542 aa9.14□□□□□ -0.95
Trim56-201ENSMUST00000054384 Klk5Q9D140 293 aa9.13□□□□□ -0.95
Trim56-201ENSMUST00000054384 Vpreb1P13372 142 aa9.13□□□□□ -0.95
Trim56-201ENSMUST00000054384 Plac8l1Q08EJ0 177 aa9.13□□□□□ -0.95
Trim56-201ENSMUST00000054384 4930470P17RikQ9D542 155 aa9.13□□□□□ -0.95
Trim56-201ENSMUST00000054384 Ramp1Q9WTJ5 148 aa9.13□□□□□ -0.95
Trim56-201ENSMUST00000054384 Igkv1-117A0A140T8M0 119 aa9.13□□□□□ -0.95
Trim56-201ENSMUST00000054384 9230102O04RikA2ASX7 82 aa9.13□□□□□ -0.95
Trim56-201ENSMUST00000054384 Rnase1P00683 149 aa9.13□□□□□ -0.95
Trim56-201ENSMUST00000054384 Cox7bP56393 80 aa9.13□□□□□ -0.95
Trim56-201ENSMUST00000054384 Gm15217A2CG07 155 aa9.12□□□□□ -0.95
Trim56-201ENSMUST00000054384 Gm9949Q8C9F4 104 aa9.12□□□□□ -0.95
Trim56-201ENSMUST00000054384 Snai3Q9QY31 287 aa9.12□□□□□ -0.95
Trim56-201ENSMUST00000054384 AW146154Q3TPQ7 468 aa9.11□□□□□ -0.95
Trim56-201ENSMUST00000054384 Ufsp1Q9CZP0 217 aa9.11□□□□□ -0.95
Trim56-201ENSMUST00000054384 H2al1mQ9DAD9 105 aa9.11□□□□□ -0.95
Trim56-201ENSMUST00000054384 NpwA0A1L1STR8 176 aa9.11□□□□□ -0.95
Trim56-201ENSMUST00000054384 Psmb8P28063 276 aa9.1□□□□□ -0.95
Trim56-201ENSMUST00000054384 EnhoQ8K1D8 76 aa9.1□□□□□ -0.95
Trim56-201ENSMUST00000054384 Triap1Q9D8Z2 76 aa9.1□□□□□ -0.95
Trim56-201ENSMUST00000054384 Atox1O08997 68 aaKnown RBP9.1□□□□□ -0.95
Trim56-201ENSMUST00000054384 Ighv1-85A0A075B5Y6 117 aa9.1□□□□□ -0.95
Trim56-201ENSMUST00000054384 Gm15557A6PWY0 234 aa9.1□□□□□ -0.95
Trim56-201ENSMUST00000054384 P06328 117 aa9.1□□□□□ -0.95
Trim56-201ENSMUST00000054384 U90926O08546 118 aa9.09□□□□□ -0.95
Trim56-201ENSMUST00000054384 Gm44965A0A0N4SVR3 59 aa9.09□□□□□ -0.95
Trim56-201ENSMUST00000054384 Spry2Q9QXV8 315 aa9.09□□□□□ -0.95
Trim56-201ENSMUST00000054384 Obox8V9GWY9 217 aa9.09□□□□□ -0.95
Trim56-201ENSMUST00000054384 Alms1Q8K4E0 3251 aa9.09□□□□□ -0.95
Trim56-201ENSMUST00000054384 Igkv3-12A0A140T8P0 119 aa9.09□□□□□ -0.95
Trim56-201ENSMUST00000054384 Igkv8-30A0A140T8M3 121 aa9.09□□□□□ -0.96
Trim56-201ENSMUST00000054384 Cfc1P97766 202 aa9.09□□□□□ -0.96
Trim56-201ENSMUST00000054384 Odf3l1Q810P2 275 aa9.08□□□□□ -0.96
Trim56-201ENSMUST00000054384 Esm1Q9QYY7 184 aa9.08□□□□□ -0.96
Trim56-201ENSMUST00000054384 Mlst8Q9DCJ1 326 aa9.08□□□□□ -0.96
Trim56-201ENSMUST00000054384 P0C913 63 aa9.08□□□□□ -0.96
Trim56-201ENSMUST00000054384 Ly6gP35461 111 aa9.08□□□□□ -0.96
Trim56-201ENSMUST00000054384 Gm12689Q8BQU9 117 aa9.08□□□□□ -0.96
Trim56-201ENSMUST00000054384 Gphb5Q812B2 130 aa9.08□□□□□ -0.96
Trim56-201ENSMUST00000054384 IgipA0A1B0GR74 53 aa9.08□□□□□ -0.96
Trim56-201ENSMUST00000054384 P04943 107 aa9.07□□□□□ -0.96
Trim56-201ENSMUST00000054384 Pla2g2aP31482 146 aa9.07□□□□□ -0.96
Trim56-201ENSMUST00000054384 P01658 132 aa9.07□□□□□ -0.96
Trim56-201ENSMUST00000054384 5730596B20RikQ8BQ08 205 aa9.07□□□□□ -0.96
Trim56-201ENSMUST00000054384 P84750 121 aa9.06□□□□□ -0.96
Trim56-201ENSMUST00000054384 ColqO35348 457 aa9.06□□□□□ -0.96
Trim56-201ENSMUST00000054384 P84751 237 aa9.06□□□□□ -0.96
Trim56-201ENSMUST00000054384 Igkv1-110A0A0B4J1I0 119 aa9.06□□□□□ -0.96
Trim56-201ENSMUST00000054384 Crip1P63254 77 aa9.06□□□□□ -0.96
Trim56-201ENSMUST00000054384 A830005F24RikQ8BRT5 167 aa9.06□□□□□ -0.96
Trim56-201ENSMUST00000054384 Ighv1-82A0A0G2JEU7 117 aa9.06□□□□□ -0.96
Trim56-201ENSMUST00000054384 E030018B13RikJ3QMS9 113 aa9.06□□□□□ -0.96
Trim56-201ENSMUST00000054384 P06320 134 aa9.06□□□□□ -0.96
Trim56-201ENSMUST00000054384 OtoglF7A4A7 2325 aa9.06□□□□□ -0.96
Trim56-201ENSMUST00000054384 Ighv10-1A0A0B4J1J6 119 aa9.06□□□□□ -0.96
Trim56-201ENSMUST00000054384 Tcl1b5P56845 121 aa9.06□□□□□ -0.96
Trim56-201ENSMUST00000054384 Ighv10-3A0A075B5T6 119 aa9.06□□□□□ -0.96
Trim56-201ENSMUST00000054384 Gm9805F6YK59 57 aa9.06□□□□□ -0.96
Trim56-201ENSMUST00000054384 Ndufa4l2Q4FZG9 87 aa9.06□□□□□ -0.96
Trim56-201ENSMUST00000054384 Flg2Q2VIS4 2362 aa9.06□□□□□ -0.96
Trim56-201ENSMUST00000054384 P04944 107 aa9.05□□□□□ -0.96
Trim56-201ENSMUST00000054384 Ighv2-6A0A075B6A7 116 aa9.05□□□□□ -0.96
Trim56-201ENSMUST00000054384 Q9D131 166 aa9.05□□□□□ -0.96
Trim56-201ENSMUST00000054384 Ube2d4D3YUH6 135 aa9.05□□□□□ -0.96
Trim56-201ENSMUST00000054384 Tcl1b3P56842 122 aa9.05□□□□□ -0.96
Trim56-201ENSMUST00000054384 Gm20604F8WIA3 75 aa9.05□□□□□ -0.96
Trim56-201ENSMUST00000054384 Gm10647E9Q8X0 124 aa9.04□□□□□ -0.96
Trim56-201ENSMUST00000054384 PscaP57096 123 aa9.04□□□□□ -0.96
Trim56-201ENSMUST00000054384 Ighv1-75A0A075B5Y2 117 aa9.03□□□□□ -0.96
Trim56-201ENSMUST00000054384 Map6d1Q14BB9 191 aa9.03□□□□□ -0.96
Trim56-201ENSMUST00000054384 Wfdc10Q3V2J9 124 aa9.03□□□□□ -0.96
Trim56-201ENSMUST00000054384 9430015G10RikA2ASP7 199 aa9.03□□□□□ -0.96
Trim56-201ENSMUST00000054384 9130230L23RikQ8CC80 163 aa9.03□□□□□ -0.96
Trim56-201ENSMUST00000054384 CenpwQ3URR0 86 aa9.03□□□□□ -0.96
Trim56-201ENSMUST00000054384 Q8K1L6 76 aa9.03□□□□□ -0.96
Trim56-201ENSMUST00000054384 Q9DAQ5 155 aa9.03□□□□□ -0.96
Trim56-201ENSMUST00000054384 Gm17359A0A0G2JEB7 487 aa9.03□□□□□ -0.96
Trim56-201ENSMUST00000054384 Odf3Q920N1 254 aa9.03□□□□□ -0.96
Trim56-201ENSMUST00000054384 Trav14-1A0A0G2JF94 121 aa9.02□□□□□ -0.96
Trim56-201ENSMUST00000054384 Abca2P41234 2434 aa9.02□□□□□ -0.97
Trim56-201ENSMUST00000054384 BC107364E9Q5A2 140 aa9.02□□□□□ -0.97
Trim56-201ENSMUST00000054384 Fgf23Q9EPC2 251 aa9.02□□□□□ -0.97
Trim56-201ENSMUST00000054384 P01747 120 aa9.02□□□□□ -0.97
Trim56-201ENSMUST00000054384 Gm9958Q8C9U4 106 aa9.02□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 53.4 ms