RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Trav9-2A0A075B647 113 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Trav9-4A0A0B4J1K2 113 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Gm44965A0A0N4SVR3 59 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Gm10226O88253 85 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 F11rO88792 300 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 PlaurP35456 327 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 BC067074F6RXI4 2391 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Notch3Q61982 2318 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Gm6812B1AXU1 112 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Gm42674D3YUT9 64 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 MsmbO08540 113 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 LhbO09108 141 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Psmb11Q8BG41 302 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Lyrm7Q9DA03 104 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Muc5acE9QAQ8 3455 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Ighv2-7A0A075B5Q8 116 aa5.62□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Ighv5-9-1A0A0A6YVS4 126 aa5.62□□□□□ -1.51
Bdnf-207ENSMUST00000111047 P01753 117 aa5.62□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Gm10295Q8CCF3 114 aa5.62□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Ifi27l2aQ8R412 90 aa5.62□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Bahcc1Q3UHR0 2643 aa5.62□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Akap9Q70FJ1 3797 aa5.62□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Gm2564F6Z9S8 108 aa5.62□□□□□ -1.51
Bdnf-207ENSMUST00000111047 CckP09240 115 aa5.62□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Synj2bpQ9D6K5 145 aa5.62□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Phlda3Q9WV95 125 aa5.62□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Trbv30A0A0B4J1P1 111 aa5.61□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Gm14137Q8CE97 175 aa5.61□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Trav3-4A0A075B654 114 aa5.61□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Reg3gO09049 174 aa5.61□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Timm17aQ9Z0V8 171 aa5.61□□□□□ -1.51
Bdnf-207ENSMUST00000111047 1700020N15RikL7MTX3 112 aa5.61□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Smim1P0C8K7 78 aa5.61□□□□□ -1.51
Bdnf-207ENSMUST00000111047 C1qcQ02105 246 aa5.61□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Ss18Q62280 418 aa5.61□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Mfap4Q9D1H9 257 aa5.61□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Arhgap32Q811P8 2089 aa5.61□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Defb18Q30KP5 85 aa5.6□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Prelid3aQ8VE85 172 aa5.6□□□□□ -1.51
Bdnf-207ENSMUST00000111047 RetnQ99P87 114 aa5.6□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Zfhx4Q9JJN2 3550 aa5.6□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Ighv1-66A0A075B5X5 117 aa5.6□□□□□ -1.51
Bdnf-207ENSMUST00000111047 1810032O08RikE9PZV8 113 aa5.6□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Ly86O88188 162 aa5.6□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Ighv2-3A0A075B696 115 aa5.6□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Polr2kQ63871 58 aa5.6□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Ighv8-12A0A0G2JDE1 119 aa5.59□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Lect2O88803 151 aa5.59□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Mpv17l2Q8VIK2 200 aa5.59□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Hcfc1Q61191 2045 aaKnown RBP5.59□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Trdv5A0A075B661 115 aa5.59□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Gm11444F6QMA6 170 aa5.59□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Adgrg4B7ZCC9 3073 aa5.59□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Igkv4-69A0A0B4J1I6 116 aa5.59□□□□□ -1.51
Bdnf-207ENSMUST00000111047 CirbpP60824 172 aaKnown RBP5.59□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Fam19a4Q7TPG5 135 aa5.59□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Ube2e2Q91W82 201 aa5.59□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Ifitm1Q9D103 106 aa5.59□□□□□ -1.51
Bdnf-207ENSMUST00000111047 OdaphJ3QNT8 126 aa5.58□□□□□ -1.52
Bdnf-207ENSMUST00000111047 LeprotO89013 131 aa5.58□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Triap1Q9D8Z2 76 aa5.58□□□□□ -1.52
Bdnf-207ENSMUST00000111047 A030005L19RikA0A1Y7VIU2 113 aa5.58□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Gm6793B2RXM2 351 aa5.58□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Ndufs7Q9DC70 224 aa5.58□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Pglyrp1O88593 182 aa5.58□□□□□ -1.52
Bdnf-207ENSMUST00000111047 P01786 117 aa5.58□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Gm904Q3V2L5 102 aa5.58□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Gm7849D3YX03 116 aa5.58□□□□□ -1.52
Bdnf-207ENSMUST00000111047 CrygdP04342 174 aa5.58□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Defa1P11477 93 aa5.58□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Gm815Q3UWS2 115 aa5.58□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Fam216aQ9DB54 251 aa5.58□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Ighv1-85A0A075B5Y6 117 aa5.57□□□□□ -1.52
Bdnf-207ENSMUST00000111047 C920008G01RikA0A0B4J1N1 112 aa5.57□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Klk1b4P00757 256 aa5.57□□□□□ -1.52
Bdnf-207ENSMUST00000111047 FcorP0DJI6 106 aa5.57□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Defa4P28311 92 aa5.57□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Trav7d-3Q5R1I1 112 aa5.57□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Gphb5Q812B2 130 aa5.57□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Q9D8Q6 235 aa5.57□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Rpl32-psP17932 135 aa5.57□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Cox6cQ9CPQ1 76 aa5.57□□□□□ -1.52
Bdnf-207ENSMUST00000111047 P01738 130 aa5.57□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Mrpl35Q9CQL6 188 aa5.57□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Tmem263Q9DAM7 115 aa5.57□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Apoc4Q61268 124 aa5.56□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Znf580Q9DB38 172 aa5.56□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Trank1Q8BV79 2999 aa5.56□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Gm7075D3Z497 112 aa5.56□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Nbeal1E9PYP2 2688 aa5.56□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Smim10l1A0A087WNQ7 89 aa5.56□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Gm9513B3GLJ6 99 aa5.56□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Defa16P50714 93 aa5.56□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Cox17P56394 63 aa5.56□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Gm5464Q3UY29 175 aa5.56□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Atp6v0e2Q91XE7 81 aa5.56□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Brwd1Q921C3 2304 aa5.56□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Ighv1-63A0A075B5X2 117 aa5.55□□□□□ -1.52
Bdnf-207ENSMUST00000111047 Hoxd3P09027 433 aa5.55□□□□□ -1.52
Bdnf-207ENSMUST00000111047 SrarpQ3ULG3 163 aa5.55□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 67.2 ms