Protein–RNA interactions for Protein: A0A075B661

Trdv5, T cell receptor delta variable 5 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv5A0A075B661 Gm25239-201ENSMUST00000174915 86 ntBASIC25.93■■□□□ 1.74
Trdv5A0A075B661 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trdv5A0A075B661 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trdv5A0A075B661 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trdv5A0A075B661 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Trdv5A0A075B661 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trdv5A0A075B661 Gm15042-201ENSMUST00000120212 883 ntBASIC23.1■■□□□ 1.29
Trdv5A0A075B661 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Trdv5A0A075B661 Psd-208ENSMUST00000224556 2034 ntBASIC22.7■■□□□ 1.22
Trdv5A0A075B661 Gm15045-201ENSMUST00000117359 883 ntBASIC22.58■■□□□ 1.21
Trdv5A0A075B661 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trdv5A0A075B661 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trdv5A0A075B661 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.26■■□□□ 1.15
Trdv5A0A075B661 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trdv5A0A075B661 Gm24109-201ENSMUST00000175489 103 ntBASIC22.23■■□□□ 1.15
Trdv5A0A075B661 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trdv5A0A075B661 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trdv5A0A075B661 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trdv5A0A075B661 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trdv5A0A075B661 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trdv5A0A075B661 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trdv5A0A075B661 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trdv5A0A075B661 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trdv5A0A075B661 Gm23366-201ENSMUST00000175022 89 ntBASIC21.77■■□□□ 1.08
Trdv5A0A075B661 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trdv5A0A075B661 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trdv5A0A075B661 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trdv5A0A075B661 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trdv5A0A075B661 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.6■■□□□ 1.05
Trdv5A0A075B661 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trdv5A0A075B661 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Trdv5A0A075B661 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trdv5A0A075B661 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trdv5A0A075B661 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.45■■□□□ 1.02
Trdv5A0A075B661 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trdv5A0A075B661 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trdv5A0A075B661 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trdv5A0A075B661 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trdv5A0A075B661 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.23■□□□□ 0.99
Trdv5A0A075B661 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trdv5A0A075B661 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trdv5A0A075B661 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trdv5A0A075B661 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trdv5A0A075B661 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trdv5A0A075B661 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.08■□□□□ 0.97
Trdv5A0A075B661 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.92■□□□□ 0.94
Trdv5A0A075B661 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.89■□□□□ 0.93
Trdv5A0A075B661 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trdv5A0A075B661 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trdv5A0A075B661 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trdv5A0A075B661 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trdv5A0A075B661 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trdv5A0A075B661 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trdv5A0A075B661 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trdv5A0A075B661 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.57■□□□□ 0.88
Trdv5A0A075B661 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trdv5A0A075B661 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Trdv5A0A075B661 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.49■□□□□ 0.87
Trdv5A0A075B661 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trdv5A0A075B661 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trdv5A0A075B661 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trdv5A0A075B661 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trdv5A0A075B661 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trdv5A0A075B661 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trdv5A0A075B661 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Trdv5A0A075B661 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trdv5A0A075B661 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trdv5A0A075B661 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trdv5A0A075B661 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trdv5A0A075B661 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trdv5A0A075B661 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.34■□□□□ 0.85
Trdv5A0A075B661 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.33■□□□□ 0.85
Trdv5A0A075B661 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.33■□□□□ 0.85
Trdv5A0A075B661 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Trdv5A0A075B661 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.32■□□□□ 0.84
Trdv5A0A075B661 Gm25238-201ENSMUST00000174914 89 ntBASIC20.29■□□□□ 0.84
Trdv5A0A075B661 Gm27325-201ENSMUST00000175467 74 ntBASIC20.27■□□□□ 0.84
Trdv5A0A075B661 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Trdv5A0A075B661 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trdv5A0A075B661 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trdv5A0A075B661 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trdv5A0A075B661 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trdv5A0A075B661 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.14■□□□□ 0.81
Trdv5A0A075B661 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trdv5A0A075B661 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trdv5A0A075B661 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trdv5A0A075B661 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trdv5A0A075B661 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trdv5A0A075B661 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trdv5A0A075B661 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trdv5A0A075B661 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trdv5A0A075B661 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trdv5A0A075B661 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Trdv5A0A075B661 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trdv5A0A075B661 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trdv5A0A075B661 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trdv5A0A075B661 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trdv5A0A075B661 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.88■□□□□ 0.77
Trdv5A0A075B661 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trdv5A0A075B661 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms