RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Rbmxl2Q9DAE2 385 aaKnown RBP12.14□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Olfr313Q5NC55 308 aa12.14□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Samd10Q7TST3 202 aa12.14□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Gm45717A0A1B0GT68 152 aa12.13□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 8030423J24RikQ9CX45 142 aa12.13□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Iah1Q9DB29 249 aa12.13□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Itpr3P70227 2670 aa12.12□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Trav4n-4A0A075B615 110 aa12.12□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Tcrg-C3L7N479 172 aa12.12□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 P01750 117 aa12.12□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 P03985 172 aa12.12□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 BC025920Q3US60 128 aa12.12□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Rpl24Q8BP67 157 aaKnown RBP12.12□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Klk7Q91VE3 249 aa12.12□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Hrct1Q9D6B9 109 aa12.12□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Pradc1Q9D9N8 188 aa12.12□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Trank1Q8BV79 2999 aa12.12□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Ighv1-64A0A075B5X3 117 aa12.11□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Ighv8-12A0A0G2JDE1 119 aa12.11□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Mrps12O35680 139 aa12.11□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Fxyd7P59648 80 aa12.11□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Ube2d1P61080 147 aaKnown RBP12.11□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Polr2kQ63871 58 aa12.11□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 DspE9Q557 2883 aaKnown RBP12.11□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Tln1P26039 2541 aaKnown RBP12.11□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Cep250Q60952 2414 aa12.11□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Brd3osA0A1B0GRB6 84 aa12.11□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Lce6aD3YV94 81 aa12.11□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Fam240aJ3QNP9 97 aa12.11□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Q9D8Q6 235 aa12.11□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Plac1Q9JI83 173 aa12.11□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Nav2E9Q842 2432 aa12.11□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Rif1Q6PR54 2419 aaKnown RBP12.11□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 P01741 114 aa12.1□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Fam222aQ6PGH4 453 aa12.1□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Gm26920S4R2A5 56 aa12.1□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Ins2P01326 110 aa12.09□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Csn3P06796 181 aa12.09□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Cd69P37217 199 aa12.09□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Ighv8-5A0A0A6YY60 119 aa12.09□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Gm44965A0A0N4SVR3 59 aa12.09□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 A730046J19RikA0A1B0GSN8 89 aa12.09□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Defa37K9J724 93 aa12.09□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Sigmar1O55242 223 aa12.09□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Defa5P28312 93 aa12.09□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 MdfiP70331 251 aa12.09□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Cks1brtQ3UNC9 96 aa12.09□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Usmg5Q78IK2 58 aa12.09□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Dpm2Q9Z324 84 aa12.09□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Ighv1-50A0A075B5W1 117 aa12.08□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Ighv1-63A0A075B5X2 117 aa12.08□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Trbv16A0A0B4J1H3 115 aa12.08□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Igkv4-74A0A0B4J1I3 119 aa12.08□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Sprr3O09116 238 aa12.08□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Sap30O88574 220 aa12.08□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 P06328 117 aa12.08□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Hint1P70349 126 aaKnown RBP12.08□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 1500011B03RikQ3TTH7 73 aa12.08□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Spink13Q3UTS8 97 aa12.08□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Mast4Q811L6 2618 aa12.08□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Sec16aA2AIX1 2377 aa12.08□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 P01727 129 aa12.07□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Egr2P08152 470 aa12.07□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Gphb5Q812B2 130 aa12.07□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Atp6v0e2Q91XE7 81 aa12.07□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Trav6-4A0A075B6B4 115 aa12.07□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Igkv4-62A0A0G2JDW9 117 aa12.07□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Gm20499D3Z4G5 72 aa12.07□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 P01726 129 aa12.07□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 P01747 120 aa12.07□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Tmem170bP86050 132 aa12.07□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Ndufb4Q9CQC7 129 aa12.07□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Epg5Q80TA9 2572 aa12.06□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Ighv1-5A0A0A6YWG2 117 aa12.06□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 LhbO09108 141 aa12.06□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Cela2aP05208 271 aa12.06□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Hivep2Q3UHF7 2430 aa12.06□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Gm12057A0A087WR21 115 aa12.05□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Gm10271F6WY25 52 aa12.05□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Gm10226O88253 85 aa12.05□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Prss41Q920S2 322 aa12.05□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Lyzl4Q9D925 145 aa12.05□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Trav3-1Q5R1I8 114 aa12.04□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Gemin7Q9CWY4 129 aa12.04□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Tcrg-C1A0A075B5Z0 172 aa12.04□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Gm6812B1AXU1 112 aa12.04□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Ube2d3P61079 147 aa12.04□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Ube2d2P62838 147 aa12.04□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Pip4p1Q3TWL2 284 aa12.04□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Gm6040Q4QY32 63 aa12.04□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Cited2O35740 269 aa12.03□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 BC048562Q80ZQ7 204 aa12.03□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Pgpep1Q9ESW8 209 aa12.03□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Arhgap32Q811P8 2089 aa12.02□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Trav8-1A0A075B641 109 aa12.02□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Pglyrp1O88593 182 aa12.02□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Mllt11P97783 90 aa12.02□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Timm17aQ9Z0V8 171 aa12.02□□□□□ -0.48
Ttc39b-202ENSMUST00000048274 Defa24Q5G865 93 aa12.02□□□□□ -0.49
Ttc39b-202ENSMUST00000048274 Tac4Q99N14 128 aa12.02□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms