Protein–RNA interactions for Protein: A0A1B0GSN8

A730046J19Rik, RIKEN cDNA A730046J19 gene, mousemouse

Predictions only

Length 89 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A730046J19RikA0A1B0GSN8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
A730046J19RikA0A1B0GSN8 Gm25239-201ENSMUST00000174915 86 ntBASIC24.82■■□□□ 1.56
A730046J19RikA0A1B0GSN8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
A730046J19RikA0A1B0GSN8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
A730046J19RikA0A1B0GSN8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
A730046J19RikA0A1B0GSN8 Psd-208ENSMUST00000224556 2034 ntBASIC23.38■■□□□ 1.33
A730046J19RikA0A1B0GSN8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
A730046J19RikA0A1B0GSN8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
A730046J19RikA0A1B0GSN8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
A730046J19RikA0A1B0GSN8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
A730046J19RikA0A1B0GSN8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
A730046J19RikA0A1B0GSN8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
A730046J19RikA0A1B0GSN8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
A730046J19RikA0A1B0GSN8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
A730046J19RikA0A1B0GSN8 Gm15042-201ENSMUST00000120212 883 ntBASIC22.48■■□□□ 1.19
A730046J19RikA0A1B0GSN8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
A730046J19RikA0A1B0GSN8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
A730046J19RikA0A1B0GSN8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
A730046J19RikA0A1B0GSN8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.31■■□□□ 1.16
A730046J19RikA0A1B0GSN8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
A730046J19RikA0A1B0GSN8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
A730046J19RikA0A1B0GSN8 Gm15045-201ENSMUST00000117359 883 ntBASIC22.03■■□□□ 1.12
A730046J19RikA0A1B0GSN8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
A730046J19RikA0A1B0GSN8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
A730046J19RikA0A1B0GSN8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
A730046J19RikA0A1B0GSN8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
A730046J19RikA0A1B0GSN8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
A730046J19RikA0A1B0GSN8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
A730046J19RikA0A1B0GSN8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
A730046J19RikA0A1B0GSN8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.65■■□□□ 1.06
A730046J19RikA0A1B0GSN8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
A730046J19RikA0A1B0GSN8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
A730046J19RikA0A1B0GSN8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.59■■□□□ 1.05
A730046J19RikA0A1B0GSN8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
A730046J19RikA0A1B0GSN8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
A730046J19RikA0A1B0GSN8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
A730046J19RikA0A1B0GSN8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
A730046J19RikA0A1B0GSN8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
A730046J19RikA0A1B0GSN8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
A730046J19RikA0A1B0GSN8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A730046J19RikA0A1B0GSN8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
A730046J19RikA0A1B0GSN8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.41■■□□□ 1.02
A730046J19RikA0A1B0GSN8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
A730046J19RikA0A1B0GSN8 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.35■■□□□ 1.01
A730046J19RikA0A1B0GSN8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
A730046J19RikA0A1B0GSN8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.29■■□□□ 1
A730046J19RikA0A1B0GSN8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
A730046J19RikA0A1B0GSN8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
A730046J19RikA0A1B0GSN8 Gm24109-201ENSMUST00000175489 103 ntBASIC21.13■□□□□ 0.97
A730046J19RikA0A1B0GSN8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
A730046J19RikA0A1B0GSN8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
A730046J19RikA0A1B0GSN8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.04■□□□□ 0.96
A730046J19RikA0A1B0GSN8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
A730046J19RikA0A1B0GSN8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
A730046J19RikA0A1B0GSN8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
A730046J19RikA0A1B0GSN8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
A730046J19RikA0A1B0GSN8 Gm23366-201ENSMUST00000175022 89 ntBASIC20.92■□□□□ 0.94
A730046J19RikA0A1B0GSN8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
A730046J19RikA0A1B0GSN8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
A730046J19RikA0A1B0GSN8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.86■□□□□ 0.93
A730046J19RikA0A1B0GSN8 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.86■□□□□ 0.93
A730046J19RikA0A1B0GSN8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
A730046J19RikA0A1B0GSN8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
A730046J19RikA0A1B0GSN8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
A730046J19RikA0A1B0GSN8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
A730046J19RikA0A1B0GSN8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
A730046J19RikA0A1B0GSN8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
A730046J19RikA0A1B0GSN8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
A730046J19RikA0A1B0GSN8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
A730046J19RikA0A1B0GSN8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
A730046J19RikA0A1B0GSN8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
A730046J19RikA0A1B0GSN8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.67■□□□□ 0.9
A730046J19RikA0A1B0GSN8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
A730046J19RikA0A1B0GSN8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
A730046J19RikA0A1B0GSN8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
A730046J19RikA0A1B0GSN8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.61■□□□□ 0.89
A730046J19RikA0A1B0GSN8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
A730046J19RikA0A1B0GSN8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
A730046J19RikA0A1B0GSN8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
A730046J19RikA0A1B0GSN8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
A730046J19RikA0A1B0GSN8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
A730046J19RikA0A1B0GSN8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
A730046J19RikA0A1B0GSN8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
A730046J19RikA0A1B0GSN8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
A730046J19RikA0A1B0GSN8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
A730046J19RikA0A1B0GSN8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
A730046J19RikA0A1B0GSN8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
A730046J19RikA0A1B0GSN8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
A730046J19RikA0A1B0GSN8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
A730046J19RikA0A1B0GSN8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
A730046J19RikA0A1B0GSN8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
A730046J19RikA0A1B0GSN8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
A730046J19RikA0A1B0GSN8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
A730046J19RikA0A1B0GSN8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
A730046J19RikA0A1B0GSN8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
A730046J19RikA0A1B0GSN8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
A730046J19RikA0A1B0GSN8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
A730046J19RikA0A1B0GSN8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
A730046J19RikA0A1B0GSN8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
A730046J19RikA0A1B0GSN8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms