Protein–RNA interactions for Protein: A0A1B0GSN8

A730046J19Rik, RIKEN cDNA A730046J19 gene, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A730046J19RikA0A1B0GSN8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
A730046J19RikA0A1B0GSN8 Gm25239-201ENSMUST00000174915 86 ntBASIC24.82■■□□□ 1.56
A730046J19RikA0A1B0GSN8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
A730046J19RikA0A1B0GSN8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
A730046J19RikA0A1B0GSN8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
A730046J19RikA0A1B0GSN8 Psd-208ENSMUST00000224556 2034 ntBASIC23.38■■□□□ 1.33
A730046J19RikA0A1B0GSN8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
A730046J19RikA0A1B0GSN8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
A730046J19RikA0A1B0GSN8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
A730046J19RikA0A1B0GSN8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
A730046J19RikA0A1B0GSN8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
A730046J19RikA0A1B0GSN8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
A730046J19RikA0A1B0GSN8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
A730046J19RikA0A1B0GSN8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
A730046J19RikA0A1B0GSN8 Gm15042-201ENSMUST00000120212 883 ntBASIC22.48■■□□□ 1.19
A730046J19RikA0A1B0GSN8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
A730046J19RikA0A1B0GSN8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
A730046J19RikA0A1B0GSN8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
A730046J19RikA0A1B0GSN8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.31■■□□□ 1.16
A730046J19RikA0A1B0GSN8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
A730046J19RikA0A1B0GSN8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
A730046J19RikA0A1B0GSN8 Gm15045-201ENSMUST00000117359 883 ntBASIC22.03■■□□□ 1.12
A730046J19RikA0A1B0GSN8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
A730046J19RikA0A1B0GSN8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
A730046J19RikA0A1B0GSN8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
A730046J19RikA0A1B0GSN8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
A730046J19RikA0A1B0GSN8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
A730046J19RikA0A1B0GSN8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
A730046J19RikA0A1B0GSN8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
A730046J19RikA0A1B0GSN8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.65■■□□□ 1.06
A730046J19RikA0A1B0GSN8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
A730046J19RikA0A1B0GSN8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
A730046J19RikA0A1B0GSN8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.59■■□□□ 1.05
A730046J19RikA0A1B0GSN8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
A730046J19RikA0A1B0GSN8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
A730046J19RikA0A1B0GSN8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
A730046J19RikA0A1B0GSN8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
A730046J19RikA0A1B0GSN8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
A730046J19RikA0A1B0GSN8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
A730046J19RikA0A1B0GSN8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A730046J19RikA0A1B0GSN8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
A730046J19RikA0A1B0GSN8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.41■■□□□ 1.02
A730046J19RikA0A1B0GSN8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
A730046J19RikA0A1B0GSN8 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.35■■□□□ 1.01
A730046J19RikA0A1B0GSN8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
A730046J19RikA0A1B0GSN8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.29■■□□□ 1
A730046J19RikA0A1B0GSN8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
A730046J19RikA0A1B0GSN8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
A730046J19RikA0A1B0GSN8 Gm24109-201ENSMUST00000175489 103 ntBASIC21.13■□□□□ 0.97
A730046J19RikA0A1B0GSN8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
A730046J19RikA0A1B0GSN8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
A730046J19RikA0A1B0GSN8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.04■□□□□ 0.96
A730046J19RikA0A1B0GSN8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
A730046J19RikA0A1B0GSN8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
A730046J19RikA0A1B0GSN8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
A730046J19RikA0A1B0GSN8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
A730046J19RikA0A1B0GSN8 Gm23366-201ENSMUST00000175022 89 ntBASIC20.92■□□□□ 0.94
A730046J19RikA0A1B0GSN8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
A730046J19RikA0A1B0GSN8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
A730046J19RikA0A1B0GSN8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.86■□□□□ 0.93
A730046J19RikA0A1B0GSN8 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.86■□□□□ 0.93
A730046J19RikA0A1B0GSN8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
A730046J19RikA0A1B0GSN8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
A730046J19RikA0A1B0GSN8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
A730046J19RikA0A1B0GSN8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
A730046J19RikA0A1B0GSN8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
A730046J19RikA0A1B0GSN8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
A730046J19RikA0A1B0GSN8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
A730046J19RikA0A1B0GSN8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
A730046J19RikA0A1B0GSN8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
A730046J19RikA0A1B0GSN8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
A730046J19RikA0A1B0GSN8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.67■□□□□ 0.9
A730046J19RikA0A1B0GSN8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
A730046J19RikA0A1B0GSN8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
A730046J19RikA0A1B0GSN8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
A730046J19RikA0A1B0GSN8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.61■□□□□ 0.89
A730046J19RikA0A1B0GSN8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
A730046J19RikA0A1B0GSN8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
A730046J19RikA0A1B0GSN8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
A730046J19RikA0A1B0GSN8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
A730046J19RikA0A1B0GSN8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
A730046J19RikA0A1B0GSN8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
A730046J19RikA0A1B0GSN8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
A730046J19RikA0A1B0GSN8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
A730046J19RikA0A1B0GSN8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
A730046J19RikA0A1B0GSN8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
A730046J19RikA0A1B0GSN8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
A730046J19RikA0A1B0GSN8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
A730046J19RikA0A1B0GSN8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
A730046J19RikA0A1B0GSN8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
A730046J19RikA0A1B0GSN8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
A730046J19RikA0A1B0GSN8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
A730046J19RikA0A1B0GSN8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
A730046J19RikA0A1B0GSN8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
A730046J19RikA0A1B0GSN8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
A730046J19RikA0A1B0GSN8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
A730046J19RikA0A1B0GSN8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
A730046J19RikA0A1B0GSN8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
A730046J19RikA0A1B0GSN8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
A730046J19RikA0A1B0GSN8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms