RNA–Protein interactions for RNA: YLR410W

VIP1, Transcript of Inositol hexakisphosphate and inositol heptakisphosphate kinase, yeast

Gene VIP1, Length 3,441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIP1	YLR410W	CBS1	P14066	229 aa		3.61	□□□□□ -1.83
VIP1	YLR410W	PDX1	P16451	410 aa		3.61	□□□□□ -1.83
VIP1	YLR410W	APE3	P37302	537 aa	Known RBP	3.61	□□□□□ -1.83
VIP1	YLR410W	ARB1	P40024	610 aa	Known RBP	3.61	□□□□□ -1.83
VIP1	YLR410W	YJL068C	P40363	299 aa		3.61	□□□□□ -1.83
VIP1	YLR410W	SKP2	P42843	763 aa		3.61	□□□□□ -1.83
VIP1	YLR410W	YDL183C	P48569	320 aa		3.61	□□□□□ -1.83
VIP1	YLR410W	PEF1	P53238	335 aa		3.61	□□□□□ -1.83
VIP1	YLR410W	GAD1	Q04792	585 aa		3.61	□□□□□ -1.83
VIP1	YLR410W	CRD1	Q07560	283 aa		3.61	□□□□□ -1.83
VIP1	YLR410W	YOR019W	Q99248	730 aa		3.61	□□□□□ -1.83
VIP1	YLR410W	ERG3	P32353	365 aa		3.61	□□□□□ -1.83
VIP1	YLR410W	RPP1	P38786	293 aa		3.61	□□□□□ -1.83
VIP1	YLR410W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.61	□□□□□ -1.83	not detected
VIP1	YLR410W	TEX1	P53851	422 aa	Known RBP	3.61	□□□□□ -1.83
VIP1	YLR410W	TRI1	Q05024	226 aa		3.61	□□□□□ -1.83
VIP1	YLR410W	ROX1	P25042	368 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	KIN82	P25341	720 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	JEM1	P40358	645 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	YPL108W	Q02872	168 aa	Predicted RBP	3.6	□□□□□ -1.83
VIP1	YLR410W	CRF1	Q04930	467 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	CTI6	Q08923	506 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	POM34	Q12445	299 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	RPO31	P04051	1460 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	AI1	P03875	834 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	CBF2	P32504	956 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	TAT1	P38085	619 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	NPR3	P38742	1146 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	LYS9	P38999	446 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	MEP1	P40260	492 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	YJL055W	P47044	245 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	RFX1	P48743	811 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	SIZ1	Q04195	904 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	ADY4	Q05955	493 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	NFI1	Q12216	726 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	BUD4	P47136	1447 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	BST1	P43571	1029 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	ARI1	P53111	347 aa	Known RBP	3.6	□□□□□ -1.83
VIP1	YLR410W	DIA2	Q08496	732 aa	Predicted RBP	3.6	□□□□□ -1.83
VIP1	YLR410W	NBP2	Q12163	236 aa		3.6	□□□□□ -1.83
VIP1	YLR410W	MVD1	P32377	396 aa	Known RBP	3.59	□□□□□ -1.83
VIP1	YLR410W	GCS1	P35197	352 aa		3.59	□□□□□ -1.83
VIP1	YLR410W	SAF1	P38352	637 aa		3.59	□□□□□ -1.83
VIP1	YLR410W	LSM5	P40089	93 aa	Known RBP	3.59	□□□□□ -1.83
VIP1	YLR410W	MCM21	Q06675	368 aa		3.59	□□□□□ -1.83
VIP1	YLR410W	PGA3	Q12746	312 aa	Known RBP	3.59	□□□□□ -1.83
VIP1	YLR410W	YOR1	P53049	1477 aa		3.59	□□□□□ -1.83
VIP1	YLR410W	YML133C	Q03099	1374 aa		3.59	□□□□□ -1.83
VIP1	YLR410W	YLL067C	Q07888	1374 aa		3.59	□□□□□ -1.83
VIP1	YLR410W	YLL066C	Q99208	1374 aa		3.59	□□□□□ -1.83
VIP1	YLR410W	STF1	P01098	86 aa		3.59	□□□□□ -1.83
VIP1	YLR410W	STE14	P32584	239 aa		3.59	□□□□□ -1.83
VIP1	YLR410W	NOP4	P37838	685 aa	Known RBP	3.59	□□□□□ -1.83
VIP1	YLR410W	YBR259W	P38338	688 aa		3.59	□□□□□ -1.83
VIP1	YLR410W	LRP1	P38801	184 aa	Known RBP	3.59	□□□□□ -1.83
VIP1	YLR410W	SSU1	P41930	458 aa		3.59	□□□□□ -1.83
VIP1	YLR410W	PRP22	P24384	1145 aa	Known RBP	3.58	□□□□□ -1.84
VIP1	YLR410W	ZIM17	P42844	174 aa		3.58	□□□□□ -1.84
VIP1	YLR410W	TEL2	P53038	688 aa		3.58	□□□□□ -1.84
VIP1	YLR410W	NSG2	P53898	299 aa		3.58	□□□□□ -1.84
VIP1	YLR410W	ZDS2	P54786	942 aa		3.58	□□□□□ -1.84
VIP1	YLR410W	CTK1	Q03957	528 aa	Known RBP	3.58	□□□□□ -1.84
VIP1	YLR410W	CYC7	P00045	113 aa		3.58	□□□□□ -1.84
VIP1	YLR410W	FEN2	P25621	512 aa	Known RBP	3.58	□□□□□ -1.84
VIP1	YLR410W	YEL057C	P39983	233 aa		3.58	□□□□□ -1.84
VIP1	YLR410W	LPX1	Q12405	387 aa	Known RBP	3.58	□□□□□ -1.84
VIP1	YLR410W	NPC2	Q12408	173 aa		3.58	□□□□□ -1.84
VIP1	YLR410W	SMC4	Q12267	1418 aa		3.58	□□□□□ -1.84
VIP1	YLR410W	CAP1	P28495	268 aa	Known RBP	3.58	□□□□□ -1.84
VIP1	YLR410W	SIC1	P38634	284 aa		3.58	□□□□□ -1.84
VIP1	YLR410W	IMA1	P53051	589 aa		3.58	□□□□□ -1.84
VIP1	YLR410W	YAP6	Q03935	383 aa		3.58	□□□□□ -1.84
VIP1	YLR410W	ERB1	Q04660	807 aa	Known RBP	3.58	□□□□□ -1.84
VIP1	YLR410W	YDL176W	Q12027	708 aa		3.58	□□□□□ -1.84
VIP1	YLR410W	ERG27	Q12452	347 aa	Known RBP	3.58	□□□□□ -1.84
VIP1	YLR410W	PDR10	P51533	1564 aa		3.58	□□□□□ -1.84
VIP1	YLR410W	PMS1	P14242	873 aa		3.57	□□□□□ -1.84
VIP1	YLR410W	TRX1	P22217	103 aa	Known RBP	3.57	□□□□□ -1.84
VIP1	YLR410W	MDL1	P33310	695 aa		3.57	□□□□□ -1.84
VIP1	YLR410W	GDI1	P39958	451 aa	Known RBP	3.57	□□□□□ -1.84
VIP1	YLR410W	EFM4	P40516	257 aa		3.57	□□□□□ -1.84
VIP1	YLR410W	YML037C	Q03703	340 aa		3.57	□□□□□ -1.84
VIP1	YLR410W	YLR345W	Q06137	509 aa		3.57	□□□□□ -1.84
VIP1	YLR410W	RCN2	Q12044	265 aa		3.57	□□□□□ -1.84
VIP1	YLR410W	FRE6	Q12473	712 aa		3.57	□□□□□ -1.84
VIP1	YLR410W	DNA2	P38859	1522 aa		3.57	□□□□□ -1.84
VIP1	YLR410W	COS12	P53053	380 aa		3.57	□□□□□ -1.84
VIP1	YLR410W	YFT2	Q06676	274 aa		3.57	□□□□□ -1.84
VIP1	YLR410W	RIM20	Q12033	661 aa		3.57	□□□□□ -1.84
VIP1	YLR410W	SMF3	Q12078	473 aa	Predicted RBP	3.57	□□□□□ -1.84
VIP1	YLR410W	TY1B-DR3	Q99231	1755 aa		3.57	□□□□□ -1.84
VIP1	YLR410W	EST1	P17214	699 aa	Predicted RBP	3.57	□□□□□ -1.84
VIP1	YLR410W	GLK1	P17709	500 aa	Known RBP	3.57	□□□□□ -1.84
VIP1	YLR410W	MSB1	P21339	1137 aa	Known RBP	3.57	□□□□□ -1.84
VIP1	YLR410W	AAD3	P25612	363 aa		3.57	□□□□□ -1.84
VIP1	YLR410W	SWC3	P31376	625 aa		3.57	□□□□□ -1.84
VIP1	YLR410W	SAC6	P32599	642 aa	Known RBP	3.57	□□□□□ -1.84
VIP1	YLR410W	CTF13	P35203	478 aa		3.57	□□□□□ -1.84
VIP1	YLR410W	LNP1	P38878	278 aa		3.57	□□□□□ -1.84
VIP1	YLR410W	GPI8	P49018	411 aa		3.57	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 72.1 ms