RNA–Protein interactions for RNA: YDR056C

YDR056C, Transcript of Putative protein of unknown function, yeast

Gene YDR056C, Length 618 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR056C	YDR056C	SEC9	P40357	651 aa		4.82	□□□□□ -1.64
YDR056C	YDR056C	IES1	P43579	692 aa		4.82	□□□□□ -1.64
YDR056C	YDR056C	FHN1	P53279	174 aa		4.82	□□□□□ -1.64
YDR056C	YDR056C	NOP15	P53927	220 aa	Predicted RBP	4.82	□□□□□ -1.64
YDR056C	YDR056C	MUK1	Q02866	612 aa		4.82	□□□□□ -1.64
YDR056C	YDR056C	YHM2	Q04013	314 aa		4.82	□□□□□ -1.64
YDR056C	YDR056C	RRB1	Q04225	511 aa	Known RBP	4.82	□□□□□ -1.64
YDR056C	YDR056C	VPS38	Q05919	439 aa		4.82	□□□□□ -1.64
YDR056C	YDR056C	MMR1	Q06324	491 aa		4.82	□□□□□ -1.64
YDR056C	YDR056C	VPS36	Q06696	566 aa		4.82	□□□□□ -1.64
YDR056C	YDR056C	POM34	Q12445	299 aa		4.82	□□□□□ -1.64
YDR056C	YDR056C	ECM3	Q99252	613 aa		4.82	□□□□□ -1.64
YDR056C	YDR056C	CYB2	P00175	591 aa		4.81	□□□□□ -1.64
YDR056C	YDR056C	RPS17A	P02407	136 aa	Known RBP	4.81	□□□□□ -1.64
YDR056C	YDR056C	CDC37	P06101	506 aa	Known RBP	4.81	□□□□□ -1.64
YDR056C	YDR056C	RPS21A	P0C0V8	87 aa	Known RBP	4.81	□□□□□ -1.64
YDR056C	YDR056C	SSB1	P11484	613 aa	Known RBP	4.81	□□□□□ -1.64
YDR056C	YDR056C	RPS17B	P14127	136 aa	Known RBP	4.81	□□□□□ -1.64
YDR056C	YDR056C	MCM3	P24279	971 aa	Known RBP	4.81	□□□□□ -1.64
YDR056C	YDR056C	KIN82	P25341	720 aa		4.81	□□□□□ -1.64
YDR056C	YDR056C	BCS1	P32839	456 aa		4.81	□□□□□ -1.64
YDR056C	YDR056C	RXT2	P38255	430 aa		4.81	□□□□□ -1.64
YDR056C	YDR056C	SFB3	P38810	929 aa		4.81	□□□□□ -1.64
YDR056C	YDR056C	SPT8	P38915	602 aa		4.81	□□□□□ -1.64
YDR056C	YDR056C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
YDR056C	YDR056C	GPP2	P40106	250 aa	Known RBP	4.81	□□□□□ -1.64
YDR056C	YDR056C	SSB2	P40150	613 aa	Known RBP	4.81	□□□□□ -1.64
YDR056C	YDR056C	CSM2	P40465	213 aa		4.81	□□□□□ -1.64
YDR056C	YDR056C	FYV8	P46949	817 aa	Known RBP	4.81	□□□□□ -1.64
YDR056C	YDR056C	SMC3	P47037	1230 aa		4.81	□□□□□ -1.64
YDR056C	YDR056C	ALF1	P53904	254 aa		4.81	□□□□□ -1.64
YDR056C	YDR056C	GYL1	Q04322	720 aa		4.81	□□□□□ -1.64
YDR056C	YDR056C	RBA50	Q04418	439 aa		4.81	□□□□□ -1.64
YDR056C	YDR056C	VBA4	Q04602	768 aa	Known RBP	4.81	□□□□□ -1.64
YDR056C	YDR056C	GFD1	Q04839	188 aa	Known RBP	4.81	□□□□□ -1.64
YDR056C	YDR056C	RGC1	Q06108	1083 aa	Known RBP	4.81	□□□□□ -1.64
YDR056C	YDR056C	YPS7	Q06325	596 aa		4.81	□□□□□ -1.64
YDR056C	YDR056C	HBT1	Q07653	1046 aa	Known RBP	4.81	□□□□□ -1.64
YDR056C	YDR056C	ZRT2	Q12436	422 aa		4.81	□□□□□ -1.64
YDR056C	YDR056C	YOR111W	Q99210	232 aa		4.81	□□□□□ -1.64
YDR056C	YDR056C	PRP22	P24384	1145 aa	Known RBP	4.8	□□□□□ -1.64
YDR056C	YDR056C	MSH1	P25846	959 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	DPB3	P27344	201 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	MYO3	P36006	1272 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	FAT1	P38225	669 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	YBR071W	P38243	211 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	CTM1	P38818	585 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	SPL2	P38839	148 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	VPS41	P38959	992 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	NDC80	P40460	691 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	LYS14	P40971	790 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	BOP3	P53958	396 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	SMX3	P54999	86 aa	Predicted RBP	4.8	□□□□□ -1.64
YDR056C	YDR056C	RCR2	Q03446	210 aa	Known RBP	4.8	□□□□□ -1.64
YDR056C	YDR056C	EBS1	Q03466	884 aa	Known RBP	4.8	□□□□□ -1.64
YDR056C	YDR056C	YMR206W	Q03695	313 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	NSE5	Q03718	556 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	TMN2	Q04562	672 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	SML1	Q04964	104 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	STP4	Q07351	490 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	PSR2	Q07949	397 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	TRE2	Q08693	809 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	TMA17	Q12513	150 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	NBL1	Q3E7Y6	73 aa		4.8	□□□□□ -1.64
YDR056C	YDR056C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
YDR056C	YDR056C	MAK31	P23059	88 aa		4.79	□□□□□ -1.64
YDR056C	YDR056C	CLB1	P24868	471 aa		4.79	□□□□□ -1.64
YDR056C	YDR056C	LCB1	P25045	558 aa	Known RBP	4.79	□□□□□ -1.64
YDR056C	YDR056C	PSO2	P30620	661 aa		4.79	□□□□□ -1.64
YDR056C	YDR056C	PHO11	P35842	467 aa		4.79	□□□□□ -1.64
YDR056C	YDR056C	PTK1	P36002	662 aa	Predicted RBP	4.79	□□□□□ -1.64
YDR056C	YDR056C	EFM2	P38347	419 aa		4.79	□□□□□ -1.64
YDR056C	YDR056C	PHO12	P38693	467 aa		4.79	□□□□□ -1.64
YDR056C	YDR056C	PCL5	P38794	229 aa		4.79	□□□□□ -1.64
YDR056C	YDR056C	RTS1	P38903	757 aa		4.79	□□□□□ -1.64
YDR056C	YDR056C	CCT4	P39078	528 aa	Known RBP	4.79	□□□□□ -1.64
YDR056C	YDR056C	PIG2	P40187	538 aa		4.79	□□□□□ -1.64
YDR056C	YDR056C	PXA1	P41909	870 aa		4.79	□□□□□ -1.64
YDR056C	YDR056C	RPN11	P43588	306 aa	Known RBP	4.79	□□□□□ -1.64
YDR056C	YDR056C	NIT2	P47016	307 aa		4.79	□□□□□ -1.64
YDR056C	YDR056C	RPT4	P53549	437 aa	Known RBP	4.79	□□□□□ -1.64
YDR056C	YDR056C	SYF1	Q04048	859 aa	Predicted RBP	4.79	□□□□□ -1.64
YDR056C	YDR056C	PPN1	Q04119	674 aa		4.79	□□□□□ -1.64
YDR056C	YDR056C	MRD1	Q06106	887 aa	Known RBP	4.79	□□□□□ -1.64
YDR056C	YDR056C	RMP1	Q12530	201 aa		4.79	□□□□□ -1.64
YDR056C	YDR056C	YRF1-3	P0CX14	1859 aa		4.79	□□□□□ -1.64
YDR056C	YDR056C	YRF1-7	P0CX15	1859 aa		4.79	□□□□□ -1.64
YDR056C	YDR056C	YRF1-6	P53819	1859 aa		4.79	□□□□□ -1.64
YDR056C	YDR056C	SPO12	P17123	173 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	RPO26	P20435	155 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	AEP2	P22136	580 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	SPO11	P23179	398 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	RIT1	P23796	513 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	FEN2	P25621	512 aa	Known RBP	4.78	□□□□□ -1.64
YDR056C	YDR056C	MF(ALPHA)2	P32435	120 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	RRP1	P35178	278 aa	Predicted RBP	4.78	□□□□□ -1.64
YDR056C	YDR056C	GDT1	P38301	280 aa	Predicted RBP	4.78	□□□□□ -1.64
YDR056C	YDR056C	NPR2	P39923	615 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	SDS3	P40505	327 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	BUD8	P41698	603 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 21 ms