RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Zcwpw2Q08EN7 125 aa11.82□□□□□ -0.52
Vcan-201ENSMUST00000109543 5730522E02RikQ5SP45 163 aa11.82□□□□□ -0.52
Vcan-201ENSMUST00000109543 Prpf8Q99PV0 2335 aaKnown RBP11.82□□□□□ -0.52
Vcan-201ENSMUST00000109543 Ighv2-6A0A075B6A7 116 aa11.82□□□□□ -0.52
Vcan-201ENSMUST00000109543 Ighv1-82A0A0G2JEU7 117 aa11.82□□□□□ -0.52
Vcan-201ENSMUST00000109543 Gm28038F7BCN9 126 aa11.82□□□□□ -0.52
Vcan-201ENSMUST00000109543 Cend1Q9JKC6 149 aa11.82□□□□□ -0.52
Vcan-201ENSMUST00000109543 Trav7-5A0A0G2JFX6 112 aa11.81□□□□□ -0.52
Vcan-201ENSMUST00000109543 SstP60041 116 aa11.81□□□□□ -0.52
Vcan-201ENSMUST00000109543 Samd5Q3V1H9 173 aa11.81□□□□□ -0.52
Vcan-201ENSMUST00000109543 Trav2Q5R1I9 109 aa11.81□□□□□ -0.52
Vcan-201ENSMUST00000109543 Olfr1437Q7TQR7 312 aa11.81□□□□□ -0.52
Vcan-201ENSMUST00000109543 Psmb11Q8BG41 302 aa11.81□□□□□ -0.52
Vcan-201ENSMUST00000109543 Mien1Q9CQ86 115 aa11.81□□□□□ -0.52
Vcan-201ENSMUST00000109543 Rchy1Q9CR50 261 aa11.81□□□□□ -0.52
Vcan-201ENSMUST00000109543 Shisa9Q9CZN4 424 aa11.81□□□□□ -0.52
Vcan-201ENSMUST00000109543 Scgb1b11A0A087WQJ0 93 aa11.81□□□□□ -0.52
Vcan-201ENSMUST00000109543 Gm94Q3V2D2 93 aa11.81□□□□□ -0.52
Vcan-201ENSMUST00000109543 Map1lc3aQ91VR7 121 aa11.81□□□□□ -0.52
Vcan-201ENSMUST00000109543 Q9CX63 252 aa11.81□□□□□ -0.52
Vcan-201ENSMUST00000109543 Q9DAB9 146 aa11.81□□□□□ -0.52
Vcan-201ENSMUST00000109543 Igkv4-71A0A0G2JEH0 117 aa11.8□□□□□ -0.52
Vcan-201ENSMUST00000109543 Gm9961Q8BNV2 113 aa11.8□□□□□ -0.52
Vcan-201ENSMUST00000109543 Malsu1Q9CWV0 228 aa11.8□□□□□ -0.52
Vcan-201ENSMUST00000109543 Obox1Q9D350 204 aa11.8□□□□□ -0.52
Vcan-201ENSMUST00000109543 Nit2Q9JHW2 276 aa11.8□□□□□ -0.52
Vcan-201ENSMUST00000109543 Rbfox3Q8BIF2 374 aa11.8□□□□□ -0.52
Vcan-201ENSMUST00000109543 Q9DAA3 117 aa11.8□□□□□ -0.52
Vcan-201ENSMUST00000109543 Abca2P41234 2434 aa11.8□□□□□ -0.52
Vcan-201ENSMUST00000109543 Chd8Q09XV5 2582 aaKnown RBP11.79□□□□□ -0.52
Vcan-201ENSMUST00000109543 Tmem262D3Z338 116 aa11.79□□□□□ -0.52
Vcan-201ENSMUST00000109543 P01801 115 aa11.79□□□□□ -0.52
Vcan-201ENSMUST00000109543 Gm12888Q3UW77 119 aa11.79□□□□□ -0.52
Vcan-201ENSMUST00000109543 Cnn3Q9DAW9 330 aaKnown RBP11.79□□□□□ -0.52
Vcan-201ENSMUST00000109543 Gm21994F6T2D2 329 aa11.78□□□□□ -0.52
Vcan-201ENSMUST00000109543 P01739 132 aa11.78□□□□□ -0.52
Vcan-201ENSMUST00000109543 Tomm6Q9CQN3 74 aa11.78□□□□□ -0.52
Vcan-201ENSMUST00000109543 Znf580Q9DB38 172 aa11.78□□□□□ -0.52
Vcan-201ENSMUST00000109543 Utp20Q5XG71 2788 aaKnown RBP11.78□□□□□ -0.52
Vcan-201ENSMUST00000109543 Ighv9-1A0A0B4J1P3 117 aa11.78□□□□□ -0.52
Vcan-201ENSMUST00000109543 MsmbO08540 113 aa11.78□□□□□ -0.52
Vcan-201ENSMUST00000109543 Cacng7P62956 275 aa11.78□□□□□ -0.52
Vcan-201ENSMUST00000109543 Olfr311Q5NC59 308 aa11.78□□□□□ -0.52
Vcan-201ENSMUST00000109543 Trav14-2A0A075B694 121 aa11.77□□□□□ -0.52
Vcan-201ENSMUST00000109543 Pmis2Q497Q9 96 aa11.77□□□□□ -0.52
Vcan-201ENSMUST00000109543 Rabac1Q9Z0S9 185 aa11.77□□□□□ -0.52
Vcan-201ENSMUST00000109543 Gm26938S4R185 226 aa11.77□□□□□ -0.52
Vcan-201ENSMUST00000109543 Nbeal1E9PYP2 2688 aa11.77□□□□□ -0.52
Vcan-201ENSMUST00000109543 Isg15Q64339 161 aaKnown RBP11.77□□□□□ -0.53
Vcan-201ENSMUST00000109543 Tax1bp3Q9DBG9 124 aa11.77□□□□□ -0.53
Vcan-201ENSMUST00000109543 OtogO55225 2910 aa11.77□□□□□ -0.53
Vcan-201ENSMUST00000109543 Ighv3-8A0A075B5T0 131 aa11.76□□□□□ -0.53
Vcan-201ENSMUST00000109543 Trav6n-6A0A075B6B2 114 aa11.76□□□□□ -0.53
Vcan-201ENSMUST00000109543 P01727 129 aa11.76□□□□□ -0.53
Vcan-201ENSMUST00000109543 Cox8bP48772 70 aa11.76□□□□□ -0.53
Vcan-201ENSMUST00000109543 Trappc1Q5NCF2 145 aa11.76□□□□□ -0.53
Vcan-201ENSMUST00000109543 TirapQ99JY1 241 aa11.76□□□□□ -0.53
Vcan-201ENSMUST00000109543 Ube2tQ9CQ37 204 aa11.76□□□□□ -0.53
Vcan-201ENSMUST00000109543 3110018I06RikQ9CXS0 120 aa11.76□□□□□ -0.53
Vcan-201ENSMUST00000109543 Gm12845A0A0N4SUM5 588 aa11.76□□□□□ -0.53
Vcan-201ENSMUST00000109543 Sertad4A7DTG3 377 aa11.76□□□□□ -0.53
Vcan-201ENSMUST00000109543 P01750 117 aa11.76□□□□□ -0.53
Vcan-201ENSMUST00000109543 Lrcol1Q3URS3 161 aa11.76□□□□□ -0.53
Vcan-201ENSMUST00000109543 Gpx7Q99LJ6 186 aa11.76□□□□□ -0.53
Vcan-201ENSMUST00000109543 Klk10Q99M20 278 aa11.76□□□□□ -0.53
Vcan-201ENSMUST00000109543 Dkk2Q9QYZ8 259 aa11.76□□□□□ -0.53
Vcan-201ENSMUST00000109543 Ptpn13Q64512 2453 aa11.75□□□□□ -0.53
Vcan-201ENSMUST00000109543 Cited2O35740 269 aa11.75□□□□□ -0.53
Vcan-201ENSMUST00000109543 Tmem136Q3TYE7 245 aa11.75□□□□□ -0.53
Vcan-201ENSMUST00000109543 Q3UNZ8 350 aa11.75□□□□□ -0.53
Vcan-201ENSMUST00000109543 Srsf1Q6PDM2 248 aaKnown RBP11.75□□□□□ -0.53
Vcan-201ENSMUST00000109543 Gm9913Q8BQQ2 135 aa11.75□□□□□ -0.53
Vcan-201ENSMUST00000109543 Usp24B1AY13 2617 aaKnown RBP11.75□□□□□ -0.53
Vcan-201ENSMUST00000109543 Trav16d-dv11A0A075B617 117 aa11.75□□□□□ -0.53
Vcan-201ENSMUST00000109543 Nat8f4G5E8L3 226 aa11.75□□□□□ -0.53
Vcan-201ENSMUST00000109543 Bri3P28662 125 aa11.75□□□□□ -0.53
Vcan-201ENSMUST00000109543 H2-DMb1P35737 261 aa11.75□□□□□ -0.53
Vcan-201ENSMUST00000109543 Olfr317Q5NCD6 327 aa11.75□□□□□ -0.53
Vcan-201ENSMUST00000109543 Igkv4-69A0A0B4J1I6 116 aa11.74□□□□□ -0.53
Vcan-201ENSMUST00000109543 4930447F04RikA2AFR2 126 aa11.74□□□□□ -0.53
Vcan-201ENSMUST00000109543 H2al2bA9Z055 111 aa11.74□□□□□ -0.53
Vcan-201ENSMUST00000109543 TshbP12656 138 aa11.74□□□□□ -0.53
Vcan-201ENSMUST00000109543 SelenokQ9JLJ1 94 aa11.74□□□□□ -0.53
Vcan-201ENSMUST00000109543 Abca12E9Q876 2595 aa11.74□□□□□ -0.53
Vcan-201ENSMUST00000109543 Ankhd1E9PUR0 2548 aaKnown RBP11.74□□□□□ -0.53
Vcan-201ENSMUST00000109543 Ighv8-8A0A0A6YXQ0 119 aa11.74□□□□□ -0.53
Vcan-201ENSMUST00000109543 Ccl21aP84444 133 aa11.74□□□□□ -0.53
Vcan-201ENSMUST00000109543 Ccl21bP86792 133 aa11.74□□□□□ -0.53
Vcan-201ENSMUST00000109543 Ccl21cP86793 133 aa11.74□□□□□ -0.53
Vcan-201ENSMUST00000109543 Khdc1cQ4KL78 166 aa11.74□□□□□ -0.53
Vcan-201ENSMUST00000109543 Gm6040Q4QY32 63 aa11.74□□□□□ -0.53
Vcan-201ENSMUST00000109543 Olfr312Q7TRZ9 308 aa11.74□□□□□ -0.53
Vcan-201ENSMUST00000109543 Il22ra1Q80XZ4 581 aa11.74□□□□□ -0.53
Vcan-201ENSMUST00000109543 Ighv1-64A0A075B5X3 117 aa11.73□□□□□ -0.53
Vcan-201ENSMUST00000109543 Ighv8-4A0A0A6YW26 117 aa11.73□□□□□ -0.53
Vcan-201ENSMUST00000109543 Gm10553J3QPF1 123 aa11.73□□□□□ -0.53
Vcan-201ENSMUST00000109543 Gm5150Q1AN92 299 aa11.73□□□□□ -0.53
Vcan-201ENSMUST00000109543 Gkn1Q9CR36 201 aa11.73□□□□□ -0.53
Vcan-201ENSMUST00000109543 Defa35E9QLQ1 93 aa11.72□□□□□ -0.53
Vcan-201ENSMUST00000109543 S100a4P07091 101 aa11.72□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 62 ms