Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Gm25239-201ENSMUST00000174915 86 ntBASIC28.93■■■□□ 2.22
Trav7-5A0A0G2JFX6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Trav7-5A0A0G2JFX6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Trav7-5A0A0G2JFX6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Trav7-5A0A0G2JFX6 Gm15042-201ENSMUST00000120212 883 ntBASIC25.6■■□□□ 1.69
Trav7-5A0A0G2JFX6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trav7-5A0A0G2JFX6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Trav7-5A0A0G2JFX6 Gm15045-201ENSMUST00000117359 883 ntBASIC25.01■■□□□ 1.59
Trav7-5A0A0G2JFX6 Gm24109-201ENSMUST00000175489 103 ntBASIC24.89■■□□□ 1.58
Trav7-5A0A0G2JFX6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trav7-5A0A0G2JFX6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trav7-5A0A0G2JFX6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trav7-5A0A0G2JFX6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Trav7-5A0A0G2JFX6 Gm23366-201ENSMUST00000175022 89 ntBASIC24.29■■□□□ 1.48
Trav7-5A0A0G2JFX6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.21■■□□□ 1.47
Trav7-5A0A0G2JFX6 Psd-208ENSMUST00000224556 2034 ntBASIC24.11■■□□□ 1.45
Trav7-5A0A0G2JFX6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Trav7-5A0A0G2JFX6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Trav7-5A0A0G2JFX6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trav7-5A0A0G2JFX6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Trav7-5A0A0G2JFX6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trav7-5A0A0G2JFX6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trav7-5A0A0G2JFX6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trav7-5A0A0G2JFX6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trav7-5A0A0G2JFX6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trav7-5A0A0G2JFX6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trav7-5A0A0G2JFX6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.65■■□□□ 1.38
Trav7-5A0A0G2JFX6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trav7-5A0A0G2JFX6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Trav7-5A0A0G2JFX6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trav7-5A0A0G2JFX6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.48■■□□□ 1.35
Trav7-5A0A0G2JFX6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trav7-5A0A0G2JFX6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Trav7-5A0A0G2JFX6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.36■■□□□ 1.33
Trav7-5A0A0G2JFX6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trav7-5A0A0G2JFX6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trav7-5A0A0G2JFX6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23■■□□□ 1.27
Trav7-5A0A0G2JFX6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.99■■□□□ 1.27
Trav7-5A0A0G2JFX6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trav7-5A0A0G2JFX6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.25
Trav7-5A0A0G2JFX6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trav7-5A0A0G2JFX6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trav7-5A0A0G2JFX6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.81■■□□□ 1.24
Trav7-5A0A0G2JFX6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trav7-5A0A0G2JFX6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trav7-5A0A0G2JFX6 Gm25238-201ENSMUST00000174914 89 ntBASIC22.71■■□□□ 1.23
Trav7-5A0A0G2JFX6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trav7-5A0A0G2JFX6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trav7-5A0A0G2JFX6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.59■■□□□ 1.21
Trav7-5A0A0G2JFX6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trav7-5A0A0G2JFX6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trav7-5A0A0G2JFX6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trav7-5A0A0G2JFX6 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.53■■□□□ 1.2
Trav7-5A0A0G2JFX6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Trav7-5A0A0G2JFX6 Gm27325-201ENSMUST00000175467 74 ntBASIC22.49■■□□□ 1.19
Trav7-5A0A0G2JFX6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.44■■□□□ 1.18
Trav7-5A0A0G2JFX6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
Trav7-5A0A0G2JFX6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trav7-5A0A0G2JFX6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trav7-5A0A0G2JFX6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trav7-5A0A0G2JFX6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.35■■□□□ 1.17
Trav7-5A0A0G2JFX6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trav7-5A0A0G2JFX6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trav7-5A0A0G2JFX6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trav7-5A0A0G2JFX6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
Trav7-5A0A0G2JFX6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trav7-5A0A0G2JFX6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Trav7-5A0A0G2JFX6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.23■■□□□ 1.15
Trav7-5A0A0G2JFX6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trav7-5A0A0G2JFX6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trav7-5A0A0G2JFX6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.18■■□□□ 1.14
Trav7-5A0A0G2JFX6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trav7-5A0A0G2JFX6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.16■■□□□ 1.14
Trav7-5A0A0G2JFX6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trav7-5A0A0G2JFX6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Trav7-5A0A0G2JFX6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trav7-5A0A0G2JFX6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Trav7-5A0A0G2JFX6 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.99■■□□□ 1.11
Trav7-5A0A0G2JFX6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trav7-5A0A0G2JFX6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trav7-5A0A0G2JFX6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.94■■□□□ 1.1
Trav7-5A0A0G2JFX6 Rab21-202ENSMUST00000218831 843 ntBASIC21.93■■□□□ 1.1
Trav7-5A0A0G2JFX6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trav7-5A0A0G2JFX6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.83■■□□□ 1.09
Trav7-5A0A0G2JFX6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trav7-5A0A0G2JFX6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trav7-5A0A0G2JFX6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trav7-5A0A0G2JFX6 Gm25262-201ENSMUST00000174934 133 ntBASIC21.74■■□□□ 1.07
Trav7-5A0A0G2JFX6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trav7-5A0A0G2JFX6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav7-5A0A0G2JFX6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trav7-5A0A0G2JFX6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav7-5A0A0G2JFX6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.64■■□□□ 1.05
Trav7-5A0A0G2JFX6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trav7-5A0A0G2JFX6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Trav7-5A0A0G2JFX6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trav7-5A0A0G2JFX6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav7-5A0A0G2JFX6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav7-5A0A0G2JFX6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav7-5A0A0G2JFX6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms