Protein–RNA interactions for Protein: Q3URS3

Lrcol1, Leucine-rich colipase-like protein 1, mousemouse

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrcol1Q3URS3 Gm25239-201ENSMUST00000174915 86 ntBASIC31.4■■■□□ 2.62
Lrcol1Q3URS3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Lrcol1Q3URS3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Lrcol1Q3URS3 Gm15042-201ENSMUST00000120212 883 ntBASIC27.33■■□□□ 1.97
Lrcol1Q3URS3 Gm24109-201ENSMUST00000175489 103 ntBASIC27.31■■□□□ 1.96
Lrcol1Q3URS3 Gm15045-201ENSMUST00000117359 883 ntBASIC26.64■■□□□ 1.86
Lrcol1Q3URS3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Lrcol1Q3URS3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Lrcol1Q3URS3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Lrcol1Q3URS3 Gm23366-201ENSMUST00000175022 89 ntBASIC26.22■■□□□ 1.79
Lrcol1Q3URS3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Lrcol1Q3URS3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Lrcol1Q3URS3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Lrcol1Q3URS3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.52■■□□□ 1.68
Lrcol1Q3URS3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Lrcol1Q3URS3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Lrcol1Q3URS3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.31■■□□□ 1.64
Lrcol1Q3URS3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
Lrcol1Q3URS3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Lrcol1Q3URS3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Lrcol1Q3URS3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Lrcol1Q3URS3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Lrcol1Q3URS3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Lrcol1Q3URS3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Lrcol1Q3URS3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.91■■□□□ 1.58
Lrcol1Q3URS3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Lrcol1Q3URS3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Lrcol1Q3URS3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.83■■□□□ 1.57
Lrcol1Q3URS3 Gm25238-201ENSMUST00000174914 89 ntBASIC24.8■■□□□ 1.56
Lrcol1Q3URS3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
Lrcol1Q3URS3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Lrcol1Q3URS3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Lrcol1Q3URS3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.37■■□□□ 1.49
Lrcol1Q3URS3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Lrcol1Q3URS3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
Lrcol1Q3URS3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Lrcol1Q3URS3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Lrcol1Q3URS3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Lrcol1Q3URS3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.12■■□□□ 1.45
Lrcol1Q3URS3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Lrcol1Q3URS3 Psd-208ENSMUST00000224556 2034 ntBASIC23.96■■□□□ 1.43
Lrcol1Q3URS3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Lrcol1Q3URS3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.96■■□□□ 1.43
Lrcol1Q3URS3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.91■■□□□ 1.42
Lrcol1Q3URS3 Gm25262-201ENSMUST00000174934 133 ntBASIC23.87■■□□□ 1.41
Lrcol1Q3URS3 Gm27325-201ENSMUST00000175467 74 ntBASIC23.87■■□□□ 1.41
Lrcol1Q3URS3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.86■■□□□ 1.41
Lrcol1Q3URS3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Lrcol1Q3URS3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lrcol1Q3URS3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lrcol1Q3URS3 Rab21-202ENSMUST00000218831 843 ntBASIC23.55■■□□□ 1.36
Lrcol1Q3URS3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Lrcol1Q3URS3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.51■■□□□ 1.35
Lrcol1Q3URS3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Lrcol1Q3URS3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.48■■□□□ 1.35
Lrcol1Q3URS3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.47■■□□□ 1.35
Lrcol1Q3URS3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.46■■□□□ 1.35
Lrcol1Q3URS3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.42■■□□□ 1.34
Lrcol1Q3URS3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lrcol1Q3URS3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Lrcol1Q3URS3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Lrcol1Q3URS3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.34■■□□□ 1.33
Lrcol1Q3URS3 Gm26115-201ENSMUST00000175605 87 ntBASIC23.33■■□□□ 1.33
Lrcol1Q3URS3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Lrcol1Q3URS3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lrcol1Q3URS3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.23■■□□□ 1.31
Lrcol1Q3URS3 Gm8109-201ENSMUST00000194076 746 ntBASIC23.21■■□□□ 1.31
Lrcol1Q3URS3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.21■■□□□ 1.31
Lrcol1Q3URS3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Lrcol1Q3URS3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Lrcol1Q3URS3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Lrcol1Q3URS3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Lrcol1Q3URS3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Lrcol1Q3URS3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
Lrcol1Q3URS3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.11■■□□□ 1.29
Lrcol1Q3URS3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lrcol1Q3URS3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Lrcol1Q3URS3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Lrcol1Q3URS3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Lrcol1Q3URS3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Lrcol1Q3URS3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23■■□□□ 1.27
Lrcol1Q3URS3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Lrcol1Q3URS3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Lrcol1Q3URS3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Lrcol1Q3URS3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Lrcol1Q3URS3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.83■■□□□ 1.25
Lrcol1Q3URS3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.82■■□□□ 1.24
Lrcol1Q3URS3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Lrcol1Q3URS3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Lrcol1Q3URS3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Lrcol1Q3URS3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Lrcol1Q3URS3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Lrcol1Q3URS3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.72■■□□□ 1.23
Lrcol1Q3URS3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Lrcol1Q3URS3 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.71■■□□□ 1.23
Lrcol1Q3URS3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Lrcol1Q3URS3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Lrcol1Q3URS3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Lrcol1Q3URS3 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.67■■□□□ 1.22
Lrcol1Q3URS3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms