Protein–RNA interactions for Protein: A0A087WQJ0

Scgb1b11, ABPA11_a18, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scgb1b11A0A087WQJ0 Gm25239-201ENSMUST00000174915 86 ntBASIC25■■□□□ 1.59
Scgb1b11A0A087WQJ0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Scgb1b11A0A087WQJ0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Scgb1b11A0A087WQJ0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Scgb1b11A0A087WQJ0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Scgb1b11A0A087WQJ0 Psd-208ENSMUST00000224556 2034 ntBASIC23.6■■□□□ 1.37
Scgb1b11A0A087WQJ0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Scgb1b11A0A087WQJ0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Scgb1b11A0A087WQJ0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Scgb1b11A0A087WQJ0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Scgb1b11A0A087WQJ0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scgb1b11A0A087WQJ0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Scgb1b11A0A087WQJ0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Scgb1b11A0A087WQJ0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Scgb1b11A0A087WQJ0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scgb1b11A0A087WQJ0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scgb1b11A0A087WQJ0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scgb1b11A0A087WQJ0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
Scgb1b11A0A087WQJ0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Scgb1b11A0A087WQJ0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Scgb1b11A0A087WQJ0 Gm15042-201ENSMUST00000120212 883 ntBASIC22.1■■□□□ 1.13
Scgb1b11A0A087WQJ0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Scgb1b11A0A087WQJ0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Scgb1b11A0A087WQJ0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Scgb1b11A0A087WQJ0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Scgb1b11A0A087WQJ0 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.97■■□□□ 1.11
Scgb1b11A0A087WQJ0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scgb1b11A0A087WQJ0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Scgb1b11A0A087WQJ0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scgb1b11A0A087WQJ0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scgb1b11A0A087WQJ0 Gm24109-201ENSMUST00000175489 103 ntBASIC21.54■■□□□ 1.04
Scgb1b11A0A087WQJ0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.52■■□□□ 1.03
Scgb1b11A0A087WQJ0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Scgb1b11A0A087WQJ0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scgb1b11A0A087WQJ0 Gm15045-201ENSMUST00000117359 883 ntBASIC21.5■■□□□ 1.03
Scgb1b11A0A087WQJ0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scgb1b11A0A087WQJ0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scgb1b11A0A087WQJ0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scgb1b11A0A087WQJ0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Scgb1b11A0A087WQJ0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Scgb1b11A0A087WQJ0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Scgb1b11A0A087WQJ0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scgb1b11A0A087WQJ0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Scgb1b11A0A087WQJ0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scgb1b11A0A087WQJ0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.1■□□□□ 0.97
Scgb1b11A0A087WQJ0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scgb1b11A0A087WQJ0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Scgb1b11A0A087WQJ0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scgb1b11A0A087WQJ0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Scgb1b11A0A087WQJ0 Gm23366-201ENSMUST00000175022 89 ntBASIC21.04■□□□□ 0.96
Scgb1b11A0A087WQJ0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scgb1b11A0A087WQJ0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scgb1b11A0A087WQJ0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scgb1b11A0A087WQJ0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scgb1b11A0A087WQJ0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scgb1b11A0A087WQJ0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scgb1b11A0A087WQJ0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scgb1b11A0A087WQJ0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.89■□□□□ 0.94
Scgb1b11A0A087WQJ0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.86■□□□□ 0.93
Scgb1b11A0A087WQJ0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scgb1b11A0A087WQJ0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scgb1b11A0A087WQJ0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.71■□□□□ 0.91
Scgb1b11A0A087WQJ0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scgb1b11A0A087WQJ0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scgb1b11A0A087WQJ0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.65■□□□□ 0.9
Scgb1b11A0A087WQJ0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scgb1b11A0A087WQJ0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scgb1b11A0A087WQJ0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scgb1b11A0A087WQJ0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scgb1b11A0A087WQJ0 Zxda-201ENSMUST00000117281 2621 ntBASIC20.54■□□□□ 0.88
Scgb1b11A0A087WQJ0 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.53■□□□□ 0.88
Scgb1b11A0A087WQJ0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Scgb1b11A0A087WQJ0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scgb1b11A0A087WQJ0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scgb1b11A0A087WQJ0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scgb1b11A0A087WQJ0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scgb1b11A0A087WQJ0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scgb1b11A0A087WQJ0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scgb1b11A0A087WQJ0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Scgb1b11A0A087WQJ0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scgb1b11A0A087WQJ0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Scgb1b11A0A087WQJ0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scgb1b11A0A087WQJ0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scgb1b11A0A087WQJ0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scgb1b11A0A087WQJ0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scgb1b11A0A087WQJ0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scgb1b11A0A087WQJ0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.31■□□□□ 0.84
Scgb1b11A0A087WQJ0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Scgb1b11A0A087WQJ0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scgb1b11A0A087WQJ0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scgb1b11A0A087WQJ0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scgb1b11A0A087WQJ0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scgb1b11A0A087WQJ0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.21■□□□□ 0.83
Scgb1b11A0A087WQJ0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Scgb1b11A0A087WQJ0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scgb1b11A0A087WQJ0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scgb1b11A0A087WQJ0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scgb1b11A0A087WQJ0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scgb1b11A0A087WQJ0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scgb1b11A0A087WQJ0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms