RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 FASNP49327 2511 aaKnown RBP2.11□□□□□ -2.07
HMGB1P50-201ENST00000605814 KRTAP10-8P60410 259 aa2.11□□□□□ -2.07
HMGB1P50-201ENST00000605814 SMR3AQ99954 134 aa2.11□□□□□ -2.07
HMGB1P50-201ENST00000605814 MEGF8Q7Z7M0 2845 aa2.11□□□□□ -2.07
HMGB1P50-201ENST00000605814 CACNA1AO00555 2505 aa2.11□□□□□ -2.07
HMGB1P50-201ENST00000605814 DNAH3Q8TD57 4116 aa2.1□□□□□ -2.07
HMGB1P50-201ENST00000605814 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
HMGB1P50-201ENST00000605814 TRRAPQ9Y4A5 3859 aa2.1□□□□□ -2.07
HMGB1P50-201ENST00000605814 LUZP6Q538Z0 58 aa2.09□□□□□ -2.07
HMGB1P50-201ENST00000605814 VPS13DQ5THJ4 4388 aa2.09□□□□□ -2.07
HMGB1P50-201ENST00000605814 DNAH9Q9NYC9 4486 aa2.09□□□□□ -2.08
HMGB1P50-201ENST00000605814 DYNC2H1Q8NCM8 4307 aaKnown RBP2.09□□□□□ -2.08
HMGB1P50-201ENST00000605814 DNAH10Q8IVF4 4471 aa2.08□□□□□ -2.08
HMGB1P50-201ENST00000605814 KRTAP1-4P0C5Y4 121 aa2.08□□□□□ -2.08
HMGB1P50-201ENST00000605814 FLNBO75369 2602 aaKnown RBP2.07□□□□□ -2.08
HMGB1P50-201ENST00000605814 ATRQ13535 2644 aa2.07□□□□□ -2.08
HMGB1P50-201ENST00000605814 NBEAL1Q6ZS30 2694 aa2.07□□□□□ -2.08
HMGB1P50-201ENST00000605814 CUBNO60494 3623 aa2.07□□□□□ -2.08
HMGB1P50-201ENST00000605814 DNAH17Q9UFH2 4485 aa2.07□□□□□ -2.08
HMGB1P50-201ENST00000605814 S4R3F8 94 aa2.07□□□□□ -2.08
HMGB1P50-201ENST00000605814 TENM1Q9UKZ4 2725 aa2.07□□□□□ -2.08
HMGB1P50-201ENST00000605814 ITPR2Q14571 2701 aa2.06□□□□□ -2.08
HMGB1P50-201ENST00000605814 ANK2Q01484 3957 aa2.06□□□□□ -2.08
HMGB1P50-201ENST00000605814 KRTAP13-4Q3LI77 160 aa2.06□□□□□ -2.08
HMGB1P50-201ENST00000605814 LYSTQ99698 3801 aa2.06□□□□□ -2.08
HMGB1P50-201ENST00000605814 C10orf95Q9H7T3 257 aa2.06□□□□□ -2.08
HMGB1P50-201ENST00000605814 MAST4O15021 2626 aa2.06□□□□□ -2.08
HMGB1P50-201ENST00000605814 FRAS1Q86XX4 4008 aa2.06□□□□□ -2.08
HMGB1P50-201ENST00000605814 HUWE1Q7Z6Z7 4374 aaKnown RBP2.06□□□□□ -2.08
HMGB1P50-201ENST00000605814 TGP01266 2768 aa2.05□□□□□ -2.08
HMGB1P50-201ENST00000605814 NSD1Q96L73 2696 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P50-201ENST00000605814 COL6A5A8TX70 2615 aa2.04□□□□□ -2.08
HMGB1P50-201ENST00000605814 COL7A1Q02388 2944 aa2.03□□□□□ -2.08
HMGB1P50-201ENST00000605814 M0QZ58 72 aa2.03□□□□□ -2.08
HMGB1P50-201ENST00000605814 KRTAP12-1P59990 96 aa2.03□□□□□ -2.08
HMGB1P50-201ENST00000605814 PLAC4Q8WY50 150 aa2.03□□□□□ -2.08
HMGB1P50-201ENST00000605814 DNAH2Q9P225 4427 aa2.02□□□□□ -2.09
HMGB1P50-201ENST00000605814 DNAH7Q8WXX0 4024 aa2.02□□□□□ -2.09
HMGB1P50-201ENST00000605814 CMYA5Q8N3K9 4069 aa2.02□□□□□ -2.09
HMGB1P50-201ENST00000605814 PRKDCP78527 4128 aaKnown RBP2.02□□□□□ -2.09
HMGB1P50-201ENST00000605814 NOTCH1P46531 2555 aa2.02□□□□□ -2.09
HMGB1P50-201ENST00000605814 DNAH11Q96DT5 4516 aa2.01□□□□□ -2.09
HMGB1P50-201ENST00000605814 HECTD4Q9Y4D8 3996 aa2.01□□□□□ -2.09
HMGB1P50-201ENST00000605814 J3QKU1 62 aa2.01□□□□□ -2.09
HMGB1P50-201ENST00000605814 DNAH6Q9C0G6 4158 aa2.01□□□□□ -2.09
HMGB1P50-201ENST00000605814 STAB2Q8WWQ8 2551 aa2.01□□□□□ -2.09
HMGB1P50-201ENST00000605814 USP24Q9UPU5 2620 aa2□□□□□ -2.09
HMGB1P50-201ENST00000605814 SACSQ9NZJ4 4579 aa2□□□□□ -2.09
HMGB1P50-201ENST00000605814 A0A0D9SG42 100 aa2□□□□□ -2.09
HMGB1P50-201ENST00000605814 CAMK2N1Q7Z7J9 78 aa2□□□□□ -2.09
HMGB1P50-201ENST00000605814 CSMD3Q7Z407 3707 aa1.99□□□□□ -2.09
HMGB1P50-201ENST00000605814 PP632Q6XCG6 107 aa1.98□□□□□ -2.09
HMGB1P50-201ENST00000605814 PLECQ15149 4684 aaKnown RBP1.97□□□□□ -2.09
HMGB1P50-201ENST00000605814 DMBT1Q9UGM3 2413 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P50-201ENST00000605814 KRTAP10-1P60331 282 aa1.97□□□□□ -2.09
HMGB1P50-201ENST00000605814 MGAM2Q2M2H8 2515 aa1.96□□□□□ -2.09
HMGB1P50-201ENST00000605814 STAB1Q9NY15 2570 aa1.96□□□□□ -2.1
HMGB1P50-201ENST00000605814 KRTAP5-5Q701N2 237 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P50-201ENST00000605814 FBN3Q75N90 2809 aa1.95□□□□□ -2.1
HMGB1P50-201ENST00000605814 SPRR5A0A1B0GTR4 108 aa1.93□□□□□ -2.1
HMGB1P50-201ENST00000605814 C9orf92A6NGG3 77 aa1.93□□□□□ -2.1
HMGB1P50-201ENST00000605814 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
HMGB1P50-201ENST00000605814 LCE1BQ5T7P3 118 aa1.93□□□□□ -2.1
HMGB1P50-201ENST00000605814 PRO2289Q9P1D8 64 aa1.93□□□□□ -2.1
HMGB1P50-201ENST00000605814 LRP1BQ9NZR2 4599 aa1.91□□□□□ -2.1
HMGB1P50-201ENST00000605814 DNAH5Q8TE73 4624 aa1.91□□□□□ -2.1
HMGB1P50-201ENST00000605814 INE1O15225 51 aa1.89□□□□□ -2.11
HMGB1P50-201ENST00000605814 PKHD1L1Q86WI1 4243 aa1.88□□□□□ -2.11
HMGB1P50-201ENST00000605814 KMT2AQ03164 3969 aa1.88□□□□□ -2.11
HMGB1P50-201ENST00000605814 LRP1Q07954 4544 aaKnown RBP1.86□□□□□ -2.11
HMGB1P50-201ENST00000605814 KRTAP10-4P60372 401 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P50-201ENST00000605814 VPS13BQ7Z7G8 4022 aa1.86□□□□□ -2.11
HMGB1P50-201ENST00000605814 STARD9Q9P2P6 4700 aa1.85□□□□□ -2.11
HMGB1P50-201ENST00000605814 PKD1P98161 4303 aa1.84□□□□□ -2.11
HMGB1P50-201ENST00000605814 DYNC1H1Q14204 4646 aaKnown RBP1.83□□□□□ -2.12
HMGB1P50-201ENST00000605814 PKHD1P08F94 4074 aa1.83□□□□□ -2.12
HMGB1P50-201ENST00000605814 APOBP04114 4563 aaKnown RBP1.82□□□□□ -2.12
HMGB1P50-201ENST00000605814 R4GN34 69 aa1.82□□□□□ -2.12
HMGB1P50-201ENST00000605814 MYCBP2O75592 4640 aa1.81□□□□□ -2.12
HMGB1P50-201ENST00000605814 FAT2Q9NYQ8 4349 aa1.81□□□□□ -2.12
HMGB1P50-201ENST00000605814 FAT3Q8TDW7 4589 aa1.81□□□□□ -2.12
HMGB1P50-201ENST00000605814 Q5VSD8 79 aa1.8□□□□□ -2.12
HMGB1P50-201ENST00000605814 TNXBP22105 4242 aa1.8□□□□□ -2.12
HMGB1P50-201ENST00000605814 FAT1Q14517 4588 aa1.79□□□□□ -2.12
HMGB1P50-201ENST00000605814 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
HMGB1P50-201ENST00000605814 HSPG2P98160 4391 aa1.78□□□□□ -2.12
HMGB1P50-201ENST00000605814 TNP1P09430 55 aa1.77□□□□□ -2.13
HMGB1P50-201ENST00000605814 SMR3BP02814 79 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P50-201ENST00000605814 LCE3DQ9BYE3 92 aa1.68□□□□□ -2.14
HMGB1P50-201ENST00000605814 FLGP20930 4061 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P50-201ENST00000605814 MT1HL1P0DM35 61 aa1.67□□□□□ -2.14
HMGB1P50-201ENST00000605814 DNHD1Q96M86 4753 aa1.66□□□□□ -2.14
HMGB1P50-201ENST00000605814 KRTAP19-2Q3LHN2 52 aa1.66□□□□□ -2.14
HMGB1P50-201ENST00000605814 KRTAP8-1Q8IUC2 63 aa1.66□□□□□ -2.14
HMGB1P50-201ENST00000605814 HYDINQ4G0P3 5121 aa1.66□□□□□ -2.14
HMGB1P50-201ENST00000605814 HERC1Q15751 4861 aa1.63□□□□□ -2.15
HMGB1P50-201ENST00000605814 KRTAP10-10P60014 251 aa1.61□□□□□ -2.15
HMGB1P50-201ENST00000605814 MUC17Q685J3 4493 aa1.6□□□□□ -2.15
HMGB1P50-201ENST00000605814 LRP2P98164 4655 aa1.6□□□□□ -2.15
HMGB1P50-201ENST00000605814 SPRR2GQ9BYE4 73 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms