RNA–Protein interactions for RNA: ENST00000590211.5

CAPNS1-210, Transcript of calpain small subunit 1, humanhuman

TSL 5

Gene CAPNS1, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-210ENST00000590211 LIMD2Q9BT23 127 aa2.28□□□□□ -2.04
CAPNS1-210ENST00000590211 R4GN34 69 aa2.28□□□□□ -2.04
CAPNS1-210ENST00000590211 DNAH11Q96DT5 4516 aa2.28□□□□□ -2.04
CAPNS1-210ENST00000590211 KRTAP13-2Q52LG2 175 aa2.27□□□□□ -2.05
CAPNS1-210ENST00000590211 Q5XG85 94 aa2.27□□□□□ -2.05
CAPNS1-210ENST00000590211 CYP4F30PQ9H0H9 118 aa2.27□□□□□ -2.05
CAPNS1-210ENST00000590211 SRRM2Q9UQ35 2752 aaKnown RBP2.27□□□□□ -2.05
CAPNS1-210ENST00000590211 HERC2O95714 4834 aa2.25□□□□□ -2.05
CAPNS1-210ENST00000590211 PKD1P98161 4303 aa2.25□□□□□ -2.05
CAPNS1-210ENST00000590211 KRTAP10-7P60409 375 aaPredicted RBP2.25□□□□□ -2.05
CAPNS1-210ENST00000590211 FAT2Q9NYQ8 4349 aa2.24□□□□□ -2.05
CAPNS1-210ENST00000590211 LOC101927531A0A1B0GV80 90 aa2.24□□□□□ -2.05
CAPNS1-210ENST00000590211 HRES1P13985 223 aa2.24□□□□□ -2.05
CAPNS1-210ENST00000590211 SPINK1P00995 79 aa2.23□□□□□ -2.05
CAPNS1-210ENST00000590211 RPS29P62273 56 aaKnown RBP2.23□□□□□ -2.05
CAPNS1-210ENST00000590211 SPAG11AQ6PDA7 123 aa2.23□□□□□ -2.05
CAPNS1-210ENST00000590211 FP248Q71RG6 208 aaPredicted RBP2.23□□□□□ -2.05
CAPNS1-210ENST00000590211 LINC00304Q8N9R0 145 aa2.23□□□□□ -2.05
CAPNS1-210ENST00000590211 PCOTHQ58A44 107 aa2.22□□□□□ -2.05
CAPNS1-210ENST00000590211 SMR3BP02814 79 aaPredicted RBP2.21□□□□□ -2.06
CAPNS1-210ENST00000590211 SACSQ9NZJ4 4579 aa2.21□□□□□ -2.06
CAPNS1-210ENST00000590211 UBR4Q5T4S7 5183 aa2.21□□□□□ -2.06
CAPNS1-210ENST00000590211 Q1T7F1 81 aa2.2□□□□□ -2.06
CAPNS1-210ENST00000590211 KRTAP13-3Q3SY46 172 aa2.2□□□□□ -2.06
CAPNS1-210ENST00000590211 COA5Q86WW8 74 aa2.2□□□□□ -2.06
CAPNS1-210ENST00000590211 VPS13BQ7Z7G8 4022 aa2.19□□□□□ -2.06
CAPNS1-210ENST00000590211 DYNC1H1Q14204 4646 aaKnown RBP2.19□□□□□ -2.06
CAPNS1-210ENST00000590211 LRP1BQ9NZR2 4599 aa2.19□□□□□ -2.06
CAPNS1-210ENST00000590211 PKHD1L1Q86WI1 4243 aa2.18□□□□□ -2.06
CAPNS1-210ENST00000590211 KRTAP12-2P59991 146 aa2.18□□□□□ -2.06
CAPNS1-210ENST00000590211 KRTAP10-4P60372 401 aaPredicted RBP2.18□□□□□ -2.06
CAPNS1-210ENST00000590211 APOBP04114 4563 aaKnown RBP2.17□□□□□ -2.06
CAPNS1-210ENST00000590211 RETNLBQ9BQ08 111 aa2.17□□□□□ -2.06
CAPNS1-210ENST00000590211 FLG2Q5D862 2391 aaPredicted RBP2.17□□□□□ -2.06
CAPNS1-210ENST00000590211 KRTAP9-6A8MVA2 160 aa2.16□□□□□ -2.06
CAPNS1-210ENST00000590211 ACYP2P14621 99 aa2.16□□□□□ -2.06
CAPNS1-210ENST00000590211 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
CAPNS1-210ENST00000590211 C7orf65Q6ZTY9 151 aa2.16□□□□□ -2.06
CAPNS1-210ENST00000590211 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
CAPNS1-210ENST00000590211 KIAA1109Q2LD37 5005 aa2.15□□□□□ -2.06
CAPNS1-210ENST00000590211 CHKB-CPT1BH3BT56 60 aa2.15□□□□□ -2.07
CAPNS1-210ENST00000590211 LCA10Q71F78 164 aa2.15□□□□□ -2.07
CAPNS1-210ENST00000590211 BRK1Q8WUW1 75 aa2.15□□□□□ -2.07
CAPNS1-210ENST00000590211 PRR15LQ9BU68 103 aa2.15□□□□□ -2.07
CAPNS1-210ENST00000590211 HERC1Q15751 4861 aa2.14□□□□□ -2.07
CAPNS1-210ENST00000590211 ABCA13Q86UQ4 5058 aa2.14□□□□□ -2.07
CAPNS1-210ENST00000590211 PKHD1P08F94 4074 aa2.14□□□□□ -2.07
CAPNS1-210ENST00000590211 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
CAPNS1-210ENST00000590211 Q5VSD8 79 aa2.14□□□□□ -2.07
CAPNS1-210ENST00000590211 LINC01558Q9Y6Z2 57 aa2.14□□□□□ -2.07
CAPNS1-210ENST00000590211 C9orf92A6NGG3 77 aa2.13□□□□□ -2.07
CAPNS1-210ENST00000590211 LINC01554Q52M75 96 aa2.13□□□□□ -2.07
CAPNS1-210ENST00000590211 Q5VV11 94 aa2.13□□□□□ -2.07
CAPNS1-210ENST00000590211 KTN1-AS1Q86SY8 53 aa2.13□□□□□ -2.07
CAPNS1-210ENST00000590211 C20orf166-AS1Q96NR2 134 aa2.13□□□□□ -2.07
CAPNS1-210ENST00000590211 KRTAP10-8P60410 259 aa2.1□□□□□ -2.07
CAPNS1-210ENST00000590211 A0A1B0GU69 56 aa2.09□□□□□ -2.07
CAPNS1-210ENST00000590211 P0C880 135 aa2.09□□□□□ -2.07
CAPNS1-210ENST00000590211 SPTSSBQ8NFR3 76 aa2.09□□□□□ -2.07
CAPNS1-210ENST00000590211 FAT1Q14517 4588 aa2.09□□□□□ -2.08
CAPNS1-210ENST00000590211 ATP11AUNQ6ZP68 121 aa2.08□□□□□ -2.08
CAPNS1-210ENST00000590211 CDC42SE1Q9NRR8 79 aa2.08□□□□□ -2.08
CAPNS1-210ENST00000590211 TNXBP22105 4242 aa2.07□□□□□ -2.08
CAPNS1-210ENST00000590211 SPINK7P58062 85 aa2.07□□□□□ -2.08
CAPNS1-210ENST00000590211 RPL37P61927 97 aaKnown RBP2.07□□□□□ -2.08
CAPNS1-210ENST00000590211 FAT3Q8TDW7 4589 aa2.06□□□□□ -2.08
CAPNS1-210ENST00000590211 HSPG2P98160 4391 aa2.06□□□□□ -2.08
CAPNS1-210ENST00000590211 COX6B2Q6YFQ2 88 aa2.05□□□□□ -2.08
CAPNS1-210ENST00000590211 PRO2289Q9P1D8 64 aa2.05□□□□□ -2.08
CAPNS1-210ENST00000590211 UQCR11O14957 56 aa2.04□□□□□ -2.08
CAPNS1-210ENST00000590211 MT1HL1P0DM35 61 aa2.04□□□□□ -2.08
CAPNS1-210ENST00000590211 MIR22HGQ0VDD5 57 aa2.02□□□□□ -2.09
CAPNS1-210ENST00000590211 TPRXLQ17RH7 258 aa2.02□□□□□ -2.09
CAPNS1-210ENST00000590211 LRP1Q07954 4544 aaKnown RBP2.01□□□□□ -2.09
CAPNS1-210ENST00000590211 SPATA8Q6RVD6 105 aa2.01□□□□□ -2.09
CAPNS1-210ENST00000590211 A6NN06 94 aa1.99□□□□□ -2.09
CAPNS1-210ENST00000590211 S4R3F8 94 aa1.99□□□□□ -2.09
CAPNS1-210ENST00000590211 MYCBP2O75592 4640 aa1.98□□□□□ -2.09
CAPNS1-210ENST00000590211 H1FX-AS1Q4G0G2 97 aa1.98□□□□□ -2.09
CAPNS1-210ENST00000590211 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
CAPNS1-210ENST00000590211 RNF213Q63HN8 5207 aa1.96□□□□□ -2.1
CAPNS1-210ENST00000590211 H0YAA0 97 aa1.95□□□□□ -2.1
CAPNS1-210ENST00000590211 MUC2Q02817 5179 aa1.95□□□□□ -2.1
CAPNS1-210ENST00000590211 KRTAP10-10P60014 251 aa1.94□□□□□ -2.1
CAPNS1-210ENST00000590211 CRCT1Q9UGL9 99 aa1.94□□□□□ -2.1
CAPNS1-210ENST00000590211 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
CAPNS1-210ENST00000590211 CSAG1Q6PB30 78 aa1.92□□□□□ -2.1
CAPNS1-210ENST00000590211 MUC17Q685J3 4493 aa1.91□□□□□ -2.1
CAPNS1-210ENST00000590211 FSIP2Q5CZC0 6907 aa1.89□□□□□ -2.11
CAPNS1-210ENST00000590211 HMCN2Q8NDA2 5059 aa1.89□□□□□ -2.11
CAPNS1-210ENST00000590211 FAT4Q6V0I7 4981 aa1.89□□□□□ -2.11
CAPNS1-210ENST00000590211 ROMO1P60602 79 aa1.89□□□□□ -2.11
CAPNS1-210ENST00000590211 A0A0D9SG42 100 aa1.88□□□□□ -2.11
CAPNS1-210ENST00000590211 KRTAP13-4Q3LI77 160 aa1.88□□□□□ -2.11
CAPNS1-210ENST00000590211 LPAP08519 4548 aa1.88□□□□□ -2.11
CAPNS1-210ENST00000590211 LRP2P98164 4655 aa1.88□□□□□ -2.11
CAPNS1-210ENST00000590211 M0QZ58 72 aa1.87□□□□□ -2.11
CAPNS1-210ENST00000590211 KRTAP4-1Q9BYQ7 146 aa1.86□□□□□ -2.11
CAPNS1-210ENST00000590211 KRTAP12-1P59990 96 aa1.82□□□□□ -2.12
CAPNS1-210ENST00000590211 KRTAP19-2Q3LHN2 52 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms