RNA–Protein interactions for RNA: ENST00000585594.5

NEDD4L-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-212ENST00000585594 SZT2Q5T011 3432 aa0.59□□□□□ -2.31
NEDD4L-212ENST00000585594 PKD1L1Q8TDX9 2849 aa0.59□□□□□ -2.31
NEDD4L-212ENST00000585594 DNAH3Q8TD57 4116 aa0.59□□□□□ -2.31
NEDD4L-212ENST00000585594 KRTAP2-3P0C7H8 128 aa0.59□□□□□ -2.31
NEDD4L-212ENST00000585594 KRTAP12-3P60328 96 aa0.59□□□□□ -2.31
NEDD4L-212ENST00000585594 KRTAP10-4P60372 401 aaPredicted RBP0.59□□□□□ -2.31
NEDD4L-212ENST00000585594 LYSTQ99698 3801 aa0.59□□□□□ -2.31
NEDD4L-212ENST00000585594 KRTAP2-4Q9BYR9 128 aa0.59□□□□□ -2.31
NEDD4L-212ENST00000585594 KRTAP2-1Q9BYU5 128 aa0.59□□□□□ -2.31
NEDD4L-212ENST00000585594 RANBP2P49792 3224 aaKnown RBP0.59□□□□□ -2.32
NEDD4L-212ENST00000585594 IGSF10Q6WRI0 2623 aa0.59□□□□□ -2.32
NEDD4L-212ENST00000585594 PCNTO95613 3336 aa0.59□□□□□ -2.32
NEDD4L-212ENST00000585594 CELSR3Q9NYQ7 3312 aa0.59□□□□□ -2.32
NEDD4L-212ENST00000585594 KALRNO60229 2985 aa0.58□□□□□ -2.32
NEDD4L-212ENST00000585594 SPTBN5Q9NRC6 3674 aaKnown RBP0.58□□□□□ -2.32
NEDD4L-212ENST00000585594 KMT2AQ03164 3969 aa0.58□□□□□ -2.32
NEDD4L-212ENST00000585594 ZANQ9Y493 2812 aa0.58□□□□□ -2.32
NEDD4L-212ENST00000585594 UTRNP46939 3433 aa0.58□□□□□ -2.32
NEDD4L-212ENST00000585594 SMG1Q96Q15 3661 aaKnown RBP0.58□□□□□ -2.32
NEDD4L-212ENST00000585594 DNAH8Q96JB1 4490 aa0.58□□□□□ -2.32
NEDD4L-212ENST00000585594 TACC2O95359 2948 aa0.58□□□□□ -2.32
NEDD4L-212ENST00000585594 FBN2P35556 2912 aa0.58□□□□□ -2.32
NEDD4L-212ENST00000585594 PRKDCP78527 4128 aaKnown RBP0.57□□□□□ -2.32
NEDD4L-212ENST00000585594 GOLGB1Q14789 3259 aaKnown RBP0.57□□□□□ -2.32
NEDD4L-212ENST00000585594 SACSQ9NZJ4 4579 aa0.57□□□□□ -2.32
NEDD4L-212ENST00000585594 EP400Q96L91 3159 aa0.57□□□□□ -2.32
NEDD4L-212ENST00000585594 KRTAP5-5Q701N2 237 aaPredicted RBP0.57□□□□□ -2.32
NEDD4L-212ENST00000585594 KRTAP8-1Q8IUC2 63 aa0.57□□□□□ -2.32
NEDD4L-212ENST00000585594 SMR3AQ99954 134 aa0.57□□□□□ -2.32
NEDD4L-212ENST00000585594 LCE3DQ9BYE3 92 aa0.57□□□□□ -2.32
NEDD4L-212ENST00000585594 DMXL1Q9Y485 3027 aa0.57□□□□□ -2.32
NEDD4L-212ENST00000585594 LAMA5O15230 3695 aa0.57□□□□□ -2.32
NEDD4L-212ENST00000585594 RELNP78509 3460 aa0.57□□□□□ -2.32
NEDD4L-212ENST00000585594 ASPMQ8IZT6 3477 aa0.57□□□□□ -2.32
NEDD4L-212ENST00000585594 CMYA5Q8N3K9 4069 aa0.57□□□□□ -2.32
NEDD4L-212ENST00000585594 DYNC2H1Q8NCM8 4307 aaKnown RBP0.56□□□□□ -2.32
NEDD4L-212ENST00000585594 TENM3Q9P273 2699 aa0.56□□□□□ -2.32
NEDD4L-212ENST00000585594 LCE3AQ5TA76 89 aa0.56□□□□□ -2.32
NEDD4L-212ENST00000585594 BSNQ9UPA5 3926 aa0.56□□□□□ -2.32
NEDD4L-212ENST00000585594 DNAH7Q8WXX0 4024 aa0.56□□□□□ -2.32
NEDD4L-212ENST00000585594 SVEP1Q4LDE5 3571 aa0.56□□□□□ -2.32
NEDD4L-212ENST00000585594 CSMD1Q96PZ7 3565 aa0.56□□□□□ -2.32
NEDD4L-212ENST00000585594 TNXBP22105 4242 aa0.56□□□□□ -2.32
NEDD4L-212ENST00000585594 SPENQ96T58 3664 aaKnown RBP0.56□□□□□ -2.32
NEDD4L-212ENST00000585594 FREM2Q5SZK8 3169 aa0.55□□□□□ -2.32
NEDD4L-212ENST00000585594 ZNF469Q96JG9 3925 aaPredicted RBP0.55□□□□□ -2.32
NEDD4L-212ENST00000585594 LAMA1P25391 3075 aa0.55□□□□□ -2.32
NEDD4L-212ENST00000585594 HUWE1Q7Z6Z7 4374 aaKnown RBP0.55□□□□□ -2.32
NEDD4L-212ENST00000585594 DNAH2Q9P225 4427 aa0.55□□□□□ -2.32
NEDD4L-212ENST00000585594 WDFY4Q6ZS81 3184 aa0.55□□□□□ -2.32
NEDD4L-212ENST00000585594 KRTAP21-3Q3LHN1 58 aa0.55□□□□□ -2.32
NEDD4L-212ENST00000585594 USP34Q70CQ2 3546 aa0.55□□□□□ -2.32
NEDD4L-212ENST00000585594 PKHD1L1Q86WI1 4243 aa0.55□□□□□ -2.32
NEDD4L-212ENST00000585594 TRRAPQ9Y4A5 3859 aa0.55□□□□□ -2.32
NEDD4L-212ENST00000585594 LAMA3Q16787 3333 aa0.54□□□□□ -2.32
NEDD4L-212ENST00000585594 FAT2Q9NYQ8 4349 aa0.54□□□□□ -2.32
NEDD4L-212ENST00000585594 FBN3Q75N90 2809 aa0.54□□□□□ -2.32
NEDD4L-212ENST00000585594 FLGP20930 4061 aaPredicted RBP0.54□□□□□ -2.32
NEDD4L-212ENST00000585594 TENM1Q9UKZ4 2725 aa0.54□□□□□ -2.32
NEDD4L-212ENST00000585594 CENPFP49454 3210 aa0.54□□□□□ -2.32
NEDD4L-212ENST00000585594 DCHS1Q96JQ0 3298 aa0.54□□□□□ -2.32
NEDD4L-212ENST00000585594 MUC3AQ02505 3323 aa0.54□□□□□ -2.32
NEDD4L-212ENST00000585594 HRNRQ86YZ3 2850 aaPredicted RBP0.54□□□□□ -2.32
NEDD4L-212ENST00000585594 DNAH1Q9P2D7 4330 aa0.53□□□□□ -2.32
NEDD4L-212ENST00000585594 SPEGQ15772 3267 aa0.53□□□□□ -2.32
NEDD4L-212ENST00000585594 UNC80Q8N2C7 3258 aa0.53□□□□□ -2.32
NEDD4L-212ENST00000585594 DNAH9Q9NYC9 4486 aa0.53□□□□□ -2.32
NEDD4L-212ENST00000585594 XIRP2A4UGR9 3374 aa0.53□□□□□ -2.32
NEDD4L-212ENST00000585594 CUBNO60494 3623 aa0.53□□□□□ -2.32
NEDD4L-212ENST00000585594 ANK3Q12955 4377 aaKnown RBP0.53□□□□□ -2.32
NEDD4L-212ENST00000585594 FRAS1Q86XX4 4008 aa0.53□□□□□ -2.32
NEDD4L-212ENST00000585594 WDFY3Q8IZQ1 3526 aa0.53□□□□□ -2.32
NEDD4L-212ENST00000585594 DNAH17Q9UFH2 4485 aa0.53□□□□□ -2.33
NEDD4L-212ENST00000585594 LAMA2P24043 3122 aaKnown RBP0.53□□□□□ -2.33
NEDD4L-212ENST00000585594 DNAH6Q9C0G6 4158 aa0.53□□□□□ -2.33
NEDD4L-212ENST00000585594 APOBP04114 4563 aaKnown RBP0.52□□□□□ -2.33
NEDD4L-212ENST00000585594 DNAH10Q8IVF4 4471 aa0.52□□□□□ -2.33
NEDD4L-212ENST00000585594 PRM1P04553 51 aa0.52□□□□□ -2.33
NEDD4L-212ENST00000585594 VCANP13611 3396 aa0.52□□□□□ -2.33
NEDD4L-212ENST00000585594 CSMD2Q7Z408 3487 aa0.52□□□□□ -2.33
NEDD4L-212ENST00000585594 EYSQ5T1H1 3165 aa0.51□□□□□ -2.33
NEDD4L-212ENST00000585594 HECTD4Q9Y4D8 3996 aa0.51□□□□□ -2.33
NEDD4L-212ENST00000585594 SMR3BP02814 79 aaPredicted RBP0.51□□□□□ -2.33
NEDD4L-212ENST00000585594 VPS13CQ709C8 3753 aa0.51□□□□□ -2.33
NEDD4L-212ENST00000585594 ADGRG4Q8IZF6 3080 aa0.51□□□□□ -2.33
NEDD4L-212ENST00000585594 PCLOQ9Y6V0 5065 aa0.5□□□□□ -2.33
NEDD4L-212ENST00000585594 MYO15AQ9UKN7 3530 aa0.5□□□□□ -2.33
NEDD4L-212ENST00000585594 HSPG2P98160 4391 aa0.5□□□□□ -2.33
NEDD4L-212ENST00000585594 DNAH14Q0VDD8 3507 aa0.5□□□□□ -2.33
NEDD4L-212ENST00000585594 PKD1P98161 4303 aa0.5□□□□□ -2.33
NEDD4L-212ENST00000585594 PLECQ15149 4684 aaKnown RBP0.5□□□□□ -2.33
NEDD4L-212ENST00000585594 FAT3Q8TDW7 4589 aa0.5□□□□□ -2.33
NEDD4L-212ENST00000585594 DNHD1Q96M86 4753 aa0.49□□□□□ -2.33
NEDD4L-212ENST00000585594 DYNC1H1Q14204 4646 aaKnown RBP0.49□□□□□ -2.33
NEDD4L-212ENST00000585594 LCE1CQ5T751 118 aa0.49□□□□□ -2.33
NEDD4L-212ENST00000585594 LCE1BQ5T7P3 118 aa0.49□□□□□ -2.33
NEDD4L-212ENST00000585594 MUC19Q7Z5P9 8384 aa0.49□□□□□ -2.33
NEDD4L-212ENST00000585594 BRCA2P51587 3418 aa0.49□□□□□ -2.33
NEDD4L-212ENST00000585594 UBR4Q5T4S7 5183 aa0.48□□□□□ -2.33
NEDD4L-212ENST00000585594 RYR1P21817 5038 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms