RNA–Protein interactions for RNA: ENST00000585594.5

NEDD4L-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-212ENST00000585594 AEBP2Q6ZN18 517 aaPredicted RBP4.92□□□□□ -1.62
NEDD4L-212ENST00000585594 POTEDQ86YR6 584 aa4.49□□□□□ -1.69
NEDD4L-212ENST00000585594 CHIC1Q5VXU3 224 aa4.38□□□□□ -1.71
NEDD4L-212ENST00000585594 SENP3Q9H4L4 574 aaPredicted RBP4.09□□□□□ -1.75
NEDD4L-212ENST00000585594 PHF23Q9BUL5 403 aaPredicted RBP4.03□□□□□ -1.76
NEDD4L-212ENST00000585594 FOXD1Q16676 465 aa3.96□□□□□ -1.78
NEDD4L-212ENST00000585594 MSH5O43196 834 aa3.75□□□□□ -1.81
NEDD4L-212ENST00000585594 PIAS4Q8N2W9 510 aaPredicted RBP3.52□□□□□ -1.85
NEDD4L-212ENST00000585594 SLC24A1O60721 1099 aa3.47□□□□□ -1.85
NEDD4L-212ENST00000585594 CACNB1Q02641 598 aaPredicted RBP3.47□□□□□ -1.85
NEDD4L-212ENST00000585594 PPP6R1Q9UPN7 881 aa3.43□□□□□ -1.86
NEDD4L-212ENST00000585594 POTEHQ6S545 545 aa3.39□□□□□ -1.87
NEDD4L-212ENST00000585594 ADRA2BP18089 450 aa3.34□□□□□ -1.87
NEDD4L-212ENST00000585594 MYT1Q01538 1121 aa3.29□□□□□ -1.88
NEDD4L-212ENST00000585594 TTBK1Q5TCY1 1321 aaPredicted RBP3.24□□□□□ -1.89
NEDD4L-212ENST00000585594 RNF39Q9H2S5 420 aa3.24□□□□□ -1.89
NEDD4L-212ENST00000585594 MAPK8IP2Q13387 824 aaPredicted RBP3.23□□□□□ -1.89
NEDD4L-212ENST00000585594 DMRT2Q9Y5R5 561 aa3.23□□□□□ -1.89
NEDD4L-212ENST00000585594 PELP1Q8IZL8 1130 aaKnown RBP3.22□□□□□ -1.89
NEDD4L-212ENST00000585594 DAXXQ9UER7 740 aaPredicted RBP3.2□□□□□ -1.9
NEDD4L-212ENST00000585594 ERICH6Q7L0X2 663 aa3.15□□□□□ -1.91
NEDD4L-212ENST00000585594 EHMT2Q96KQ7 1210 aa3.12□□□□□ -1.91
NEDD4L-212ENST00000585594 APLP2Q06481 763 aa3.1□□□□□ -1.91
NEDD4L-212ENST00000585594 C1QBPQ07021 282 aaKnown RBP3.1□□□□□ -1.91
NEDD4L-212ENST00000585594 NCBP3Q53F19 620 aaKnown RBP3.09□□□□□ -1.91
NEDD4L-212ENST00000585594 PRKCSHP14314 528 aaPredicted RBP3.08□□□□□ -1.92
NEDD4L-212ENST00000585594 PLPPR3Q6T4P5 718 aa3.05□□□□□ -1.92
NEDD4L-212ENST00000585594 RTN4Q9NQC3 1192 aaKnown RBP3.04□□□□□ -1.92
NEDD4L-212ENST00000585594 DCAF8L1A6NGE4 600 aa3.01□□□□□ -1.93
NEDD4L-212ENST00000585594 AMER1Q5JTC6 1135 aaPredicted RBP3.01□□□□□ -1.93
NEDD4L-212ENST00000585594 RANGAP1P46060 587 aaPredicted RBP3□□□□□ -1.93
NEDD4L-212ENST00000585594 ARXQ96QS3 562 aa3□□□□□ -1.93
NEDD4L-212ENST00000585594 SP7Q8TDD2 431 aaPredicted RBP2.97□□□□□ -1.93
NEDD4L-212ENST00000585594 HOXD11P31277 338 aaPredicted RBP2.96□□□□□ -1.94
NEDD4L-212ENST00000585594 EIF5BO60841 1220 aaKnown RBP2.95□□□□□ -1.94
NEDD4L-212ENST00000585594 HOMEZQ8IX15 550 aa2.91□□□□□ -1.94
NEDD4L-212ENST00000585594 TIMELESSQ9UNS1 1208 aa2.91□□□□□ -1.94
NEDD4L-212ENST00000585594 KCNA4P22459 653 aa2.9□□□□□ -1.95
NEDD4L-212ENST00000585594 DSG3P32926 999 aa2.9□□□□□ -1.95
NEDD4L-212ENST00000585594 PLSCR2Q9NRY7 297 aa2.9□□□□□ -1.95
NEDD4L-212ENST00000585594 DNAJC5BQ9UF47 199 aa2.89□□□□□ -1.95
NEDD4L-212ENST00000585594 TULP1O00294 542 aaPredicted RBP2.88□□□□□ -1.95
NEDD4L-212ENST00000585594 SCAF1Q9H7N4 1312 aaKnown RBP2.87□□□□□ -1.95
NEDD4L-212ENST00000585594 PODXL2Q9NZ53 605 aa2.86□□□□□ -1.95
NEDD4L-212ENST00000585594 TAOK2Q9UL54 1235 aa2.86□□□□□ -1.95
NEDD4L-212ENST00000585594 KLHL34Q8N239 644 aa2.85□□□□□ -1.95
NEDD4L-212ENST00000585594 CSRNP3Q8WYN3 585 aa2.84□□□□□ -1.95
NEDD4L-212ENST00000585594 BCANQ96GW7 911 aa2.84□□□□□ -1.95
NEDD4L-212ENST00000585594 TPRNQ4KMQ1 711 aa2.83□□□□□ -1.96
NEDD4L-212ENST00000585594 CHRDL2Q6WN34 429 aa2.83□□□□□ -1.96
NEDD4L-212ENST00000585594 BCL11AQ9H165 835 aa2.82□□□□□ -1.96
NEDD4L-212ENST00000585594 SPINK5Q9NQ38 1064 aaPredicted RBP2.82□□□□□ -1.96
NEDD4L-212ENST00000585594 PLEKHG5O94827 1062 aa2.8□□□□□ -1.96
NEDD4L-212ENST00000585594 NPM2Q86SE8 214 aaKnown RBP2.8□□□□□ -1.96
NEDD4L-212ENST00000585594 EVX2Q03828 476 aa2.79□□□□□ -1.96
NEDD4L-212ENST00000585594 GTF3C3Q9Y5Q9 886 aa2.79□□□□□ -1.96
NEDD4L-212ENST00000585594 C14orf37Q86TY3 774 aa2.77□□□□□ -1.97
NEDD4L-212ENST00000585594 RNF216Q9NWF9 866 aaPredicted RBP2.77□□□□□ -1.97
NEDD4L-212ENST00000585594 LHX8Q68G74 356 aa2.76□□□□□ -1.97
NEDD4L-212ENST00000585594 FBXO3Q9UK99 471 aa2.76□□□□□ -1.97
NEDD4L-212ENST00000585594 DCAF8L2P0C7V8 631 aa2.75□□□□□ -1.97
NEDD4L-212ENST00000585594 HAP1P54257 671 aaPredicted RBP2.75□□□□□ -1.97
NEDD4L-212ENST00000585594 PLCB2Q00722 1185 aa2.75□□□□□ -1.97
NEDD4L-212ENST00000585594 FAM9AQ8IZU1 332 aaPredicted RBP2.74□□□□□ -1.97
NEDD4L-212ENST00000585594 U3KPZ7 1027 aaPredicted RBP2.73□□□□□ -1.97
NEDD4L-212ENST00000585594 CAPN15O75808 1086 aa2.72□□□□□ -1.97
NEDD4L-212ENST00000585594 PDIA4P13667 645 aaKnown RBP2.72□□□□□ -1.97
NEDD4L-212ENST00000585594 TMEM132AQ24JP5 1023 aa2.72□□□□□ -1.97
NEDD4L-212ENST00000585594 PIP4P2Q8N4L2 257 aa2.71□□□□□ -1.98
NEDD4L-212ENST00000585594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.71□□□□□ -1.98
NEDD4L-212ENST00000585594 SLC4A1APQ9BWU0 796 aaKnown RBP2.71□□□□□ -1.98
NEDD4L-212ENST00000585594 NEFLP07196 543 aa2.7□□□□□ -1.98
NEDD4L-212ENST00000585594 UBE2Q2Q8WVN8 375 aa2.7□□□□□ -1.98
NEDD4L-212ENST00000585594 HAX1O00165 279 aa2.69□□□□□ -1.98
NEDD4L-212ENST00000585594 TRIM26Q12899 539 aaPredicted RBP2.69□□□□□ -1.98
NEDD4L-212ENST00000585594 CDK11AQ9UQ88 783 aaPredicted RBP2.69□□□□□ -1.98
NEDD4L-212ENST00000585594 ABCB7O75027 752 aa2.68□□□□□ -1.98
NEDD4L-212ENST00000585594 CDK11BP21127 795 aaKnown RBP2.68□□□□□ -1.98
NEDD4L-212ENST00000585594 PDE4CQ08493 712 aa2.68□□□□□ -1.98
NEDD4L-212ENST00000585594 LOC105371045A0A1W2PR82 267 aa2.67□□□□□ -1.98
NEDD4L-212ENST00000585594 SUPT5HO00267 1087 aaKnown RBP2.67□□□□□ -1.98
NEDD4L-212ENST00000585594 CNKSR2Q8WXI2 1034 aa2.67□□□□□ -1.98
NEDD4L-212ENST00000585594 CHMP4AQ9BY43 222 aa2.67□□□□□ -1.98
NEDD4L-212ENST00000585594 TAF7LQ5H9L4 462 aa2.66□□□□□ -1.98
NEDD4L-212ENST00000585594 PPP4R3CPQ6ZMV5 832 aa2.66□□□□□ -1.98
NEDD4L-212ENST00000585594 VSIG10Q8N0Z9 540 aa2.66□□□□□ -1.98
NEDD4L-212ENST00000585594 CENPBP07199 599 aaPredicted RBP2.65□□□□□ -1.99
NEDD4L-212ENST00000585594 HMGB1P09429 215 aaKnown RBP2.65□□□□□ -1.99
NEDD4L-212ENST00000585594 POTEIP0CG38 1075 aa2.65□□□□□ -1.99
NEDD4L-212ENST00000585594 BRD2P25440 801 aaKnown RBP2.65□□□□□ -1.99
NEDD4L-212ENST00000585594 PKNOX2Q96KN3 472 aa2.65□□□□□ -1.99
NEDD4L-212ENST00000585594 RBM42Q9BTD8 480 aaKnown RBP2.65□□□□□ -1.99
NEDD4L-212ENST00000585594 HSP90B1P14625 803 aaKnown RBP2.64□□□□□ -1.99
NEDD4L-212ENST00000585594 HRCP23327 699 aa2.64□□□□□ -1.99
NEDD4L-212ENST00000585594 FXR2P51116 673 aaKnown RBP eCLIP2.64□□□□□ -1.99
NEDD4L-212ENST00000585594 SAMD1Q6SPF0 538 aaPredicted RBP2.64□□□□□ -1.99
NEDD4L-212ENST00000585594 POTEMA6NI47 508 aa2.63□□□□□ -1.99
NEDD4L-212ENST00000585594 UBTFP17480 764 aaKnown RBP2.63□□□□□ -1.99
NEDD4L-212ENST00000585594 DHX37Q8IY37 1157 aaKnown RBP2.62□□□□□ -1.99
NEDD4L-212ENST00000585594 SHROOM4Q9ULL8 1493 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms