RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ITPR1Q14643 2758 aa-0.18□□□□□ -2.44
UBR1-205ENST00000564540 RYR2Q92736 4967 aa-0.18□□□□□ -2.44
UBR1-205ENST00000564540 COL6A5A8TX70 2615 aa-0.18□□□□□ -2.44
UBR1-205ENST00000564540 ABCC8Q09428 1581 aa-0.19□□□□□ -2.44
UBR1-205ENST00000564540 NBEAQ8NFP9 2946 aa-0.19□□□□□ -2.44
UBR1-205ENST00000564540 KIF21BO75037 1637 aa-0.19□□□□□ -2.44
UBR1-205ENST00000564540 NRXN3Q9Y4C0 1643 aa-0.19□□□□□ -2.44
UBR1-205ENST00000564540 TFF3Q07654 80 aa-0.19□□□□□ -2.44
UBR1-205ENST00000564540 MUC17Q685J3 4493 aa-0.19□□□□□ -2.44
UBR1-205ENST00000564540 VPS13DQ5THJ4 4388 aa-0.19□□□□□ -2.44
UBR1-205ENST00000564540 LAMA3Q16787 3333 aa-0.2□□□□□ -2.44
UBR1-205ENST00000564540 ABCA5Q8WWZ7 1642 aa-0.2□□□□□ -2.44
UBR1-205ENST00000564540 NEBP20929 6669 aa-0.2□□□□□ -2.44
UBR1-205ENST00000564540 C5orf42Q9H799 3197 aa-0.2□□□□□ -2.44
UBR1-205ENST00000564540 LRRK2Q5S007 2527 aa-0.2□□□□□ -2.44
UBR1-205ENST00000564540 NBEAL2Q6ZNJ1 2754 aa-0.2□□□□□ -2.44
UBR1-205ENST00000564540 DNHD1Q96M86 4753 aa-0.2□□□□□ -2.44
UBR1-205ENST00000564540 RNF213Q63HN8 5207 aa-0.2□□□□□ -2.44
UBR1-205ENST00000564540 PLECQ15149 4684 aaKnown RBP-0.21□□□□□ -2.44
UBR1-205ENST00000564540 TNP1P09430 55 aa-0.21□□□□□ -2.44
UBR1-205ENST00000564540 KRTAP19-8Q3LI54 63 aa-0.21□□□□□ -2.44
UBR1-205ENST00000564540 RANBP2P49792 3224 aaKnown RBP-0.21□□□□□ -2.44
UBR1-205ENST00000564540 DNAH7Q8WXX0 4024 aa-0.22□□□□□ -2.44
UBR1-205ENST00000564540 A0A0C4DFX4 3053 aa-0.22□□□□□ -2.44
UBR1-205ENST00000564540 CSMD1Q96PZ7 3565 aa-0.22□□□□□ -2.44
UBR1-205ENST00000564540 CFAP46Q8IYW2 2715 aa-0.22□□□□□ -2.44
UBR1-205ENST00000564540 FAM208AQ9UK61 1670 aaKnown RBP-0.22□□□□□ -2.44
UBR1-205ENST00000564540 DNAH2Q9P225 4427 aa-0.22□□□□□ -2.44
UBR1-205ENST00000564540 DNAH11Q96DT5 4516 aa-0.23□□□□□ -2.45
UBR1-205ENST00000564540 LINC01546A6NGU7 62 aa-0.23□□□□□ -2.45
UBR1-205ENST00000564540 SNRPGP15A8MWD9 76 aa-0.23□□□□□ -2.45
UBR1-205ENST00000564540 M0QY20 66 aa-0.23□□□□□ -2.45
UBR1-205ENST00000564540 MT4P47944 62 aa-0.23□□□□□ -2.45
UBR1-205ENST00000564540 RIF1Q5UIP0 2472 aaKnown RBP-0.23□□□□□ -2.45
UBR1-205ENST00000564540 CCDC168Q8NDH2 2452 aa-0.23□□□□□ -2.45
UBR1-205ENST00000564540 COL12A1Q99715 3063 aa-0.23□□□□□ -2.45
UBR1-205ENST00000564540 SPENQ96T58 3664 aaKnown RBP-0.23□□□□□ -2.45
UBR1-205ENST00000564540 IQGAP1P46940 1657 aa-0.24□□□□□ -2.45
UBR1-205ENST00000564540 MGAM2Q2M2H8 2515 aa-0.24□□□□□ -2.45
UBR1-205ENST00000564540 CMYA5Q8N3K9 4069 aa-0.24□□□□□ -2.45
UBR1-205ENST00000564540 ACACBO00763 2458 aa-0.24□□□□□ -2.45
UBR1-205ENST00000564540 CHD7Q9P2D1 2997 aa-0.25□□□□□ -2.45
UBR1-205ENST00000564540 KRTAP20-2Q3LI61 65 aa-0.25□□□□□ -2.45
UBR1-205ENST00000564540 DDX60Q8IY21 1712 aaKnown RBP-0.25□□□□□ -2.45
UBR1-205ENST00000564540 FAM186AA6NE01 2351 aa-0.25□□□□□ -2.45
UBR1-205ENST00000564540 DNAH1Q9P2D7 4330 aa-0.26□□□□□ -2.45
UBR1-205ENST00000564540 LRBAP50851 2863 aa-0.26□□□□□ -2.45
UBR1-205ENST00000564540 TLN2Q9Y4G6 2542 aa-0.26□□□□□ -2.45
UBR1-205ENST00000564540 DYNC1H1Q14204 4646 aaKnown RBP-0.26□□□□□ -2.45
UBR1-205ENST00000564540 A8MTW9 85 aa-0.26□□□□□ -2.45
UBR1-205ENST00000564540 KRTAP19-5Q3LI72 72 aa-0.26□□□□□ -2.45
UBR1-205ENST00000564540 SMIM2Q9BVW6 85 aa-0.26□□□□□ -2.45
UBR1-205ENST00000564540 TRIOO75962 3097 aa-0.26□□□□□ -2.45
UBR1-205ENST00000564540 MYO9AB2RTY4 2548 aa-0.27□□□□□ -2.45
UBR1-205ENST00000564540 M0QZ58 72 aa-0.27□□□□□ -2.45
UBR1-205ENST00000564540 SMG1Q96Q15 3661 aaKnown RBP-0.27□□□□□ -2.45
UBR1-205ENST00000564540 ACACAQ13085 2346 aa-0.27□□□□□ -2.45
UBR1-205ENST00000564540 ITPR2Q14571 2701 aa-0.28□□□□□ -2.45
UBR1-205ENST00000564540 ABCA13Q86UQ4 5058 aa-0.28□□□□□ -2.45
UBR1-205ENST00000564540 SPTBN5Q9NRC6 3674 aaKnown RBP-0.28□□□□□ -2.45
UBR1-205ENST00000564540 MGAQ8IWI9 3026 aa-0.28□□□□□ -2.45
UBR1-205ENST00000564540 TLN1Q9Y490 2541 aaKnown RBP-0.28□□□□□ -2.45
UBR1-205ENST00000564540 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.29□□□□□ -2.46
UBR1-205ENST00000564540 EYSQ5T1H1 3165 aa-0.29□□□□□ -2.46
UBR1-205ENST00000564540 CSMD2Q7Z408 3487 aa-0.29□□□□□ -2.46
UBR1-205ENST00000564540 ATMQ13315 3056 aa-0.29□□□□□ -2.46
UBR1-205ENST00000564540 CRYBG3Q68DQ2 2970 aa-0.29□□□□□ -2.46
UBR1-205ENST00000564540 NFAT5O94916 1531 aa-0.29□□□□□ -2.46
UBR1-205ENST00000564540 DNAH5Q8TE73 4624 aa-0.29□□□□□ -2.46
UBR1-205ENST00000564540 DNAH8Q96JB1 4490 aa-0.3□□□□□ -2.46
UBR1-205ENST00000564540 SRCAPQ6ZRS2 3230 aa-0.3□□□□□ -2.46
UBR1-205ENST00000564540 BOD1L1Q8NFC6 3051 aa-0.3□□□□□ -2.46
UBR1-205ENST00000564540 DEFB131AP59861 70 aa-0.3□□□□□ -2.46
UBR1-205ENST00000564540 KRTAP8-1Q8IUC2 63 aa-0.3□□□□□ -2.46
UBR1-205ENST00000564540 DMXL2Q8TDJ6 3036 aa-0.3□□□□□ -2.46
UBR1-205ENST00000564540 SPTAN1Q13813 2472 aaKnown RBP-0.3□□□□□ -2.46
UBR1-205ENST00000564540 CELSR3Q9NYQ7 3312 aa-0.31□□□□□ -2.46
UBR1-205ENST00000564540 SMR3BP02814 79 aaPredicted RBP-0.31□□□□□ -2.46
UBR1-205ENST00000564540 CLPSL2Q6UWE3 100 aa-0.31□□□□□ -2.46
UBR1-205ENST00000564540 DNAH17Q9UFH2 4485 aa-0.32□□□□□ -2.46
UBR1-205ENST00000564540 ZFHX4Q86UP3 3567 aa-0.32□□□□□ -2.46
UBR1-205ENST00000564540 TRRAPQ9Y4A5 3859 aa-0.32□□□□□ -2.46
UBR1-205ENST00000564540 PRUNE2Q8WUY3 3088 aa-0.32□□□□□ -2.46
UBR1-205ENST00000564540 ADGRG4Q8IZF6 3080 aa-0.32□□□□□ -2.46
UBR1-205ENST00000564540 DNAH10Q8IVF4 4471 aa-0.32□□□□□ -2.46
UBR1-205ENST00000564540 FREM2Q5SZK8 3169 aa-0.33□□□□□ -2.46
UBR1-205ENST00000564540 MT1HP80294 61 aa-0.33□□□□□ -2.46
UBR1-205ENST00000564540 WDFY3Q8IZQ1 3526 aa-0.33□□□□□ -2.46
UBR1-205ENST00000564540 FRYLO94915 3013 aa-0.35□□□□□ -2.47
UBR1-205ENST00000564540 SZT2Q5T011 3432 aa-0.35□□□□□ -2.47
UBR1-205ENST00000564540 SPEGQ15772 3267 aa-0.36□□□□□ -2.47
UBR1-205ENST00000564540 DEFB1P60022 68 aa-0.36□□□□□ -2.47
UBR1-205ENST00000564540 CFAP54Q96N23 3096 aa-0.36□□□□□ -2.47
UBR1-205ENST00000564540 TRPM2O94759 1503 aa-0.37□□□□□ -2.47
UBR1-205ENST00000564540 MYO15AQ9UKN7 3530 aa-0.37□□□□□ -2.47
UBR1-205ENST00000564540 MKI67P46013 3256 aaKnown RBP-0.38□□□□□ -2.47
UBR1-205ENST00000564540 NDUFA1O15239 70 aa-0.38□□□□□ -2.47
UBR1-205ENST00000564540 POLR2KP53803 58 aaKnown RBP-0.38□□□□□ -2.47
UBR1-205ENST00000564540 MT1XP80297 61 aa-0.38□□□□□ -2.47
UBR1-205ENST00000564540 CLTCL1P53675 1640 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms