RNA–Protein interactions for RNA: ENST00000528948.1

CAPRIN1-206, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-206ENST00000528948 A0A0D9SG42 100 aa4.65□□□□□ -1.67
CAPRIN1-206ENST00000528948 LYSTQ99698 3801 aa4.65□□□□□ -1.67
CAPRIN1-206ENST00000528948 DNAH9Q9NYC9 4486 aa4.65□□□□□ -1.67
CAPRIN1-206ENST00000528948 ITPR2Q14571 2701 aa4.64□□□□□ -1.67
CAPRIN1-206ENST00000528948 FBN1P35555 2871 aaKnown RBP4.64□□□□□ -1.67
CAPRIN1-206ENST00000528948 SEC61BP60468 96 aaKnown RBP4.63□□□□□ -1.67
CAPRIN1-206ENST00000528948 C10orf95Q9H7T3 257 aa4.62□□□□□ -1.67
CAPRIN1-206ENST00000528948 FRAS1Q86XX4 4008 aa4.62□□□□□ -1.67
CAPRIN1-206ENST00000528948 DNAH17Q9UFH2 4485 aa4.62□□□□□ -1.67
CAPRIN1-206ENST00000528948 CMYA5Q8N3K9 4069 aa4.61□□□□□ -1.67
CAPRIN1-206ENST00000528948 TGP01266 2768 aa4.6□□□□□ -1.67
CAPRIN1-206ENST00000528948 FLG2Q5D862 2391 aaPredicted RBP4.6□□□□□ -1.67
CAPRIN1-206ENST00000528948 KRTAP13-4Q3LI77 160 aa4.6□□□□□ -1.67
CAPRIN1-206ENST00000528948 MEGF8Q7Z7M0 2845 aa4.59□□□□□ -1.67
CAPRIN1-206ENST00000528948 PRKDCP78527 4128 aaKnown RBP4.59□□□□□ -1.67
CAPRIN1-206ENST00000528948 PP632Q6XCG6 107 aa4.59□□□□□ -1.67
CAPRIN1-206ENST00000528948 C9orf92A6NGG3 77 aa4.58□□□□□ -1.68
CAPRIN1-206ENST00000528948 KRTAP12-1P59990 96 aa4.58□□□□□ -1.68
CAPRIN1-206ENST00000528948 KRTAP5-11Q6L8G4 156 aa4.58□□□□□ -1.68
CAPRIN1-206ENST00000528948 DNAH7Q8WXX0 4024 aa4.58□□□□□ -1.68
CAPRIN1-206ENST00000528948 HECTD4Q9Y4D8 3996 aa4.57□□□□□ -1.68
CAPRIN1-206ENST00000528948 PLAC4Q8WY50 150 aa4.57□□□□□ -1.68
CAPRIN1-206ENST00000528948 NBEAL1Q6ZS30 2694 aa4.56□□□□□ -1.68
CAPRIN1-206ENST00000528948 KRTAP12-2P59991 146 aa4.55□□□□□ -1.68
CAPRIN1-206ENST00000528948 KRTAP10-1P60331 282 aa4.55□□□□□ -1.68
CAPRIN1-206ENST00000528948 MT3P25713 68 aa4.53□□□□□ -1.68
CAPRIN1-206ENST00000528948 KRTAP10-7P60409 375 aaPredicted RBP4.52□□□□□ -1.69
CAPRIN1-206ENST00000528948 CAMK2N1Q7Z7J9 78 aa4.52□□□□□ -1.69
CAPRIN1-206ENST00000528948 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
CAPRIN1-206ENST00000528948 STAB2Q8WWQ8 2551 aa4.51□□□□□ -1.69
CAPRIN1-206ENST00000528948 NOTCH1P46531 2555 aa4.5□□□□□ -1.69
CAPRIN1-206ENST00000528948 COL7A1Q02388 2944 aa4.49□□□□□ -1.69
CAPRIN1-206ENST00000528948 DNAH6Q9C0G6 4158 aa4.48□□□□□ -1.69
CAPRIN1-206ENST00000528948 CSMD3Q7Z407 3707 aa4.46□□□□□ -1.69
CAPRIN1-206ENST00000528948 PLECQ15149 4684 aaKnown RBP4.46□□□□□ -1.7
CAPRIN1-206ENST00000528948 DNAH2Q9P225 4427 aa4.46□□□□□ -1.7
CAPRIN1-206ENST00000528948 COL6A5A8TX70 2615 aa4.45□□□□□ -1.7
CAPRIN1-206ENST00000528948 DNAH11Q96DT5 4516 aa4.45□□□□□ -1.7
CAPRIN1-206ENST00000528948 MGAM2Q2M2H8 2515 aa4.41□□□□□ -1.7
CAPRIN1-206ENST00000528948 STAB1Q9NY15 2570 aa4.41□□□□□ -1.7
CAPRIN1-206ENST00000528948 SACSQ9NZJ4 4579 aa4.41□□□□□ -1.7
CAPRIN1-206ENST00000528948 R4GN34 69 aa4.34□□□□□ -1.71
CAPRIN1-206ENST00000528948 DNAH5Q8TE73 4624 aa4.31□□□□□ -1.72
CAPRIN1-206ENST00000528948 STARD9Q9P2P6 4700 aa4.3□□□□□ -1.72
CAPRIN1-206ENST00000528948 FBN3Q75N90 2809 aa4.28□□□□□ -1.72
CAPRIN1-206ENST00000528948 PKHD1L1Q86WI1 4243 aa4.28□□□□□ -1.72
CAPRIN1-206ENST00000528948 PRO2289Q9P1D8 64 aa4.28□□□□□ -1.72
CAPRIN1-206ENST00000528948 DMBT1Q9UGM3 2413 aaPredicted RBP4.28□□□□□ -1.72
CAPRIN1-206ENST00000528948 KRTAP10-4P60372 401 aaPredicted RBP4.27□□□□□ -1.73
CAPRIN1-206ENST00000528948 KRTAP10-8P60410 259 aa4.26□□□□□ -1.73
CAPRIN1-206ENST00000528948 VPS13BQ7Z7G8 4022 aa4.25□□□□□ -1.73
CAPRIN1-206ENST00000528948 INE1O15225 51 aa4.25□□□□□ -1.73
CAPRIN1-206ENST00000528948 KMT2AQ03164 3969 aa4.25□□□□□ -1.73
CAPRIN1-206ENST00000528948 LRP1BQ9NZR2 4599 aa4.25□□□□□ -1.73
CAPRIN1-206ENST00000528948 SPRR5A0A1B0GTR4 108 aa4.23□□□□□ -1.73
CAPRIN1-206ENST00000528948 PKHD1P08F94 4074 aa4.2□□□□□ -1.74
CAPRIN1-206ENST00000528948 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
CAPRIN1-206ENST00000528948 SMR3BP02814 79 aaPredicted RBP4.18□□□□□ -1.74
CAPRIN1-206ENST00000528948 TNP1P09430 55 aa4.16□□□□□ -1.74
CAPRIN1-206ENST00000528948 PKD1P98161 4303 aa4.16□□□□□ -1.74
CAPRIN1-206ENST00000528948 APOBP04114 4563 aaKnown RBP4.12□□□□□ -1.75
CAPRIN1-206ENST00000528948 A0A1B0GVY2 172 aa4.12□□□□□ -1.75
CAPRIN1-206ENST00000528948 Q5VSD8 79 aa4.12□□□□□ -1.75
CAPRIN1-206ENST00000528948 LRP1Q07954 4544 aaKnown RBP4.09□□□□□ -1.75
CAPRIN1-206ENST00000528948 TNXBP22105 4242 aa4.08□□□□□ -1.76
CAPRIN1-206ENST00000528948 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
CAPRIN1-206ENST00000528948 FAT2Q9NYQ8 4349 aa4.07□□□□□ -1.76
CAPRIN1-206ENST00000528948 DYNC1H1Q14204 4646 aaKnown RBP4.04□□□□□ -1.76
CAPRIN1-206ENST00000528948 FAT3Q8TDW7 4589 aa4.02□□□□□ -1.77
CAPRIN1-206ENST00000528948 HSPG2P98160 4391 aa4.01□□□□□ -1.77
CAPRIN1-206ENST00000528948 FAT1Q14517 4588 aa3.99□□□□□ -1.77
CAPRIN1-206ENST00000528948 MYCBP2O75592 4640 aa3.96□□□□□ -1.77
CAPRIN1-206ENST00000528948 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
CAPRIN1-206ENST00000528948 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
CAPRIN1-206ENST00000528948 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
CAPRIN1-206ENST00000528948 KRTAP10-5P60370 271 aa3.91□□□□□ -1.78
CAPRIN1-206ENST00000528948 MT1HL1P0DM35 61 aa3.88□□□□□ -1.79
CAPRIN1-206ENST00000528948 KRTAP10-12P60413 245 aa3.88□□□□□ -1.79
CAPRIN1-206ENST00000528948 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
CAPRIN1-206ENST00000528948 DNHD1Q96M86 4753 aa3.83□□□□□ -1.8
CAPRIN1-206ENST00000528948 HYDINQ4G0P3 5121 aa3.81□□□□□ -1.8
CAPRIN1-206ENST00000528948 KRTAP21-3Q3LHN1 58 aa3.8□□□□□ -1.8
CAPRIN1-206ENST00000528948 KRTAP8-1Q8IUC2 63 aa3.73□□□□□ -1.81
CAPRIN1-206ENST00000528948 FLGP20930 4061 aaPredicted RBP3.72□□□□□ -1.81
CAPRIN1-206ENST00000528948 SPRR2GQ9BYE4 73 aa3.68□□□□□ -1.82
CAPRIN1-206ENST00000528948 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
CAPRIN1-206ENST00000528948 KRTAP19-2Q3LHN2 52 aa3.67□□□□□ -1.82
CAPRIN1-206ENST00000528948 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
CAPRIN1-206ENST00000528948 LCE3AQ5TA76 89 aa3.65□□□□□ -1.83
CAPRIN1-206ENST00000528948 HERC1Q15751 4861 aa3.61□□□□□ -1.83
CAPRIN1-206ENST00000528948 RYR2Q92736 4967 aa3.59□□□□□ -1.83
CAPRIN1-206ENST00000528948 KRTAP12-3P60328 96 aa3.56□□□□□ -1.84
CAPRIN1-206ENST00000528948 KRTAP4-1Q9BYQ7 146 aa3.56□□□□□ -1.84
CAPRIN1-206ENST00000528948 LRP2P98164 4655 aa3.56□□□□□ -1.84
CAPRIN1-206ENST00000528948 MUC17Q685J3 4493 aa3.56□□□□□ -1.84
CAPRIN1-206ENST00000528948 RYR1P21817 5038 aa3.54□□□□□ -1.84
CAPRIN1-206ENST00000528948 KMT2CQ8NEZ4 4911 aaKnown RBP3.52□□□□□ -1.85
CAPRIN1-206ENST00000528948 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
CAPRIN1-206ENST00000528948 KRTAP10-10P60014 251 aa3.52□□□□□ -1.85
CAPRIN1-206ENST00000528948 LPAP08519 4548 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms