RNA–Protein interactions for RNA: ENST00000528948.1

CAPRIN1-206, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-206ENST00000528948 AEBP2Q6ZN18 517 aaPredicted RBP25.59■■□□□ 1.69
CAPRIN1-206ENST00000528948 CHIC1Q5VXU3 224 aa24.95■■□□□ 1.58
CAPRIN1-206ENST00000528948 SENP3Q9H4L4 574 aaPredicted RBP21.91■■□□□ 1.1
CAPRIN1-206ENST00000528948 PHF23Q9BUL5 403 aaPredicted RBP21.83■■□□□ 1.09
CAPRIN1-206ENST00000528948 FOXD1Q16676 465 aa20.35■□□□□ 0.85
CAPRIN1-206ENST00000528948 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
CAPRIN1-206ENST00000528948 POTEDQ86YR6 584 aa19.51■□□□□ 0.71
CAPRIN1-206ENST00000528948 PPP6R1Q9UPN7 881 aa19.29■□□□□ 0.68
CAPRIN1-206ENST00000528948 ADRA2BP18089 450 aa19.28■□□□□ 0.68
CAPRIN1-206ENST00000528948 MSH5O43196 834 aa19.13■□□□□ 0.65
CAPRIN1-206ENST00000528948 PIAS4Q8N2W9 510 aaPredicted RBP19.08■□□□□ 0.64
CAPRIN1-206ENST00000528948 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
CAPRIN1-206ENST00000528948 PPP4R3CPQ6ZMV5 832 aa17.76■□□□□ 0.43
CAPRIN1-206ENST00000528948 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
CAPRIN1-206ENST00000528948 DMRT2Q9Y5R5 561 aa17.43■□□□□ 0.38
CAPRIN1-206ENST00000528948 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
CAPRIN1-206ENST00000528948 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
CAPRIN1-206ENST00000528948 KCNA4P22459 653 aa17.1■□□□□ 0.33
CAPRIN1-206ENST00000528948 RNF216Q9NWF9 866 aaPredicted RBP17.06■□□□□ 0.32
CAPRIN1-206ENST00000528948 HOXD11P31277 338 aaPredicted RBP17.01■□□□□ 0.31
CAPRIN1-206ENST00000528948 NPM3O75607 178 aaKnown RBP16.98■□□□□ 0.31
CAPRIN1-206ENST00000528948 CACNB1Q02641 598 aaPredicted RBP16.69■□□□□ 0.26
CAPRIN1-206ENST00000528948 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
CAPRIN1-206ENST00000528948 DCAF8L1A6NGE4 600 aa16.63■□□□□ 0.25
CAPRIN1-206ENST00000528948 NISCHQ9Y2I1 1504 aa16.42■□□□□ 0.22
CAPRIN1-206ENST00000528948 RNF39Q9H2S5 420 aa16.35■□□□□ 0.21
CAPRIN1-206ENST00000528948 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.2
CAPRIN1-206ENST00000528948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.21■□□□□ 0.192e-11■■□□□ 11.4
CAPRIN1-206ENST00000528948 SLC4A2P04920 1241 aa16.03■□□□□ 0.16
CAPRIN1-206ENST00000528948 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
CAPRIN1-206ENST00000528948 FOXD4L1Q9NU39 408 aa15.89■□□□□ 0.13
CAPRIN1-206ENST00000528948 U3KPZ7 1027 aaPredicted RBP15.88■□□□□ 0.13
CAPRIN1-206ENST00000528948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.8■□□□□ 0.12
CAPRIN1-206ENST00000528948 HNRNPUL2Q1KMD3 747 aaKnown RBP15.8■□□□□ 0.12
CAPRIN1-206ENST00000528948 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
CAPRIN1-206ENST00000528948 APLP2Q06481 763 aa15.71■□□□□ 0.11
CAPRIN1-206ENST00000528948 ZBTB22O15209 634 aa15.69■□□□□ 0.1
CAPRIN1-206ENST00000528948 SAMD1Q6SPF0 538 aaPredicted RBP15.69■□□□□ 0.1
CAPRIN1-206ENST00000528948 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
CAPRIN1-206ENST00000528948 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
CAPRIN1-206ENST00000528948 PELP1Q8IZL8 1130 aaKnown RBP15.51■□□□□ 0.07
CAPRIN1-206ENST00000528948 CAPN15O75808 1086 aa15.45■□□□□ 0.06
CAPRIN1-206ENST00000528948 SPINK5Q9NQ38 1064 aaPredicted RBP15.43■□□□□ 0.06
CAPRIN1-206ENST00000528948 ATXN8OSP0DMR3 200 aa15.42■□□□□ 0.06
CAPRIN1-206ENST00000528948 ZNF219Q9P2Y4 722 aaPredicted RBP15.42■□□□□ 0.06
CAPRIN1-206ENST00000528948 TRHP20396 242 aaPredicted RBP15.32■□□□□ 0.04
CAPRIN1-206ENST00000528948 MYT1Q01538 1121 aa15.23■□□□□ 0.03
CAPRIN1-206ENST00000528948 DSG3P32926 999 aa15.22■□□□□ 0.03
CAPRIN1-206ENST00000528948 ATF5Q9Y2D1 282 aaPredicted RBP15.2■□□□□ 0.02
CAPRIN1-206ENST00000528948 POTEHQ6S545 545 aa15.17■□□□□ 0.02
CAPRIN1-206ENST00000528948 HRCP23327 699 aa15.13■□□□□ 0.01
CAPRIN1-206ENST00000528948 ABCB7O75027 752 aa15.08■□□□□ 0
CAPRIN1-206ENST00000528948 POLA2Q14181 598 aa15.04■□□□□ -0
CAPRIN1-206ENST00000528948 ZBTB12Q9Y330 459 aaPredicted RBP14.94□□□□□ -0.02
CAPRIN1-206ENST00000528948 FBLN2P98095 1184 aa14.76□□□□□ -0.05
CAPRIN1-206ENST00000528948 RBM42Q9BTD8 480 aaKnown RBP14.64□□□□□ -0.07
CAPRIN1-206ENST00000528948 ZEB1P37275 1124 aaPredicted RBP14.6□□□□□ -0.07
CAPRIN1-206ENST00000528948 DCAF1Q9Y4B6 1507 aa14.6□□□□□ -0.07
CAPRIN1-206ENST00000528948 MKRN4PQ13434 485 aaPredicted RBP14.56□□□□□ -0.08
CAPRIN1-206ENST00000528948 OSCARQ8IYS5 282 aa14.51□□□□□ -0.09
CAPRIN1-206ENST00000528948 SPDYE2BA6NHP3 402 aa14.47□□□□□ -0.09
CAPRIN1-206ENST00000528948 SPDYE6P0CI01 402 aa14.47□□□□□ -0.09
CAPRIN1-206ENST00000528948 SPDYE2Q495Y8 402 aa14.47□□□□□ -0.09
CAPRIN1-206ENST00000528948 TTBK1Q5TCY1 1321 aaPredicted RBP14.45□□□□□ -0.1
CAPRIN1-206ENST00000528948 CCDC180Q9P1Z9 1646 aa14.44□□□□□ -0.1
CAPRIN1-206ENST00000528948 PCGF6Q9BYE7 350 aa14.4□□□□□ -0.1
CAPRIN1-206ENST00000528948 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
CAPRIN1-206ENST00000528948 ZNF692Q9BU19 519 aaPredicted RBP14.33□□□□□ -0.12
CAPRIN1-206ENST00000528948 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
CAPRIN1-206ENST00000528948 TRIM26Q12899 539 aaPredicted RBP14.29□□□□□ -0.12
CAPRIN1-206ENST00000528948 SSUH2Q9Y2M2 353 aa14.28□□□□□ -0.12
CAPRIN1-206ENST00000528948 SPDYE4A6NLX3 237 aa14.24□□□□□ -0.13
CAPRIN1-206ENST00000528948 MYO15BQ96JP2 1530 aa14.21□□□□□ -0.13
CAPRIN1-206ENST00000528948 PPARGC1BQ86YN6 1023 aaKnown RBP14.21□□□□□ -0.13
CAPRIN1-206ENST00000528948 REM2Q8IYK8 340 aaPredicted RBP14.17□□□□□ -0.14
CAPRIN1-206ENST00000528948 SUPT5HO00267 1087 aaKnown RBP14.15□□□□□ -0.14
CAPRIN1-206ENST00000528948 PABPN1Q86U42 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
CAPRIN1-206ENST00000528948 CENPBP07199 599 aaPredicted RBP14.08□□□□□ -0.16
CAPRIN1-206ENST00000528948 SPDYE1Q8NFV5 336 aaPredicted RBP14.07□□□□□ -0.16
CAPRIN1-206ENST00000528948 ZCCHC6Q5VYS8 1495 aaKnown RBP14.06□□□□□ -0.16
CAPRIN1-206ENST00000528948 FKBP8Q14318 412 aa14.06□□□□□ -0.16
CAPRIN1-206ENST00000528948 ACIN1Q9UKV3 1341 aaKnown RBP14.03□□□□□ -0.16
CAPRIN1-206ENST00000528948 SP7Q8TDD2 431 aaPredicted RBP14□□□□□ -0.17
CAPRIN1-206ENST00000528948 SHROOM4Q9ULL8 1493 aa13.99□□□□□ -0.17
CAPRIN1-206ENST00000528948 PITPNM1O00562 1244 aa13.99□□□□□ -0.17
CAPRIN1-206ENST00000528948 PROM2Q8N271 834 aa13.99□□□□□ -0.17
CAPRIN1-206ENST00000528948 STAG3Q9UJ98 1225 aa13.97□□□□□ -0.17
CAPRIN1-206ENST00000528948 CLEC11AQ9Y240 323 aa13.93□□□□□ -0.18
CAPRIN1-206ENST00000528948 PIP4P2Q8N4L2 257 aa13.89□□□□□ -0.19
CAPRIN1-206ENST00000528948 CLSPNQ9HAW4 1339 aa13.85□□□□□ -0.19
CAPRIN1-206ENST00000528948 PRR29P0C7W0 189 aa13.84□□□□□ -0.19
CAPRIN1-206ENST00000528948 FXR2P51116 673 aaKnown RBP eCLIP13.8□□□□□ -0.21e-6■□□□□ 8.3
CAPRIN1-206ENST00000528948 FBXO3Q9UK99 471 aa13.75□□□□□ -0.21
CAPRIN1-206ENST00000528948 GTF3C3Q9Y5Q9 886 aa13.73□□□□□ -0.21
CAPRIN1-206ENST00000528948 NEUROD1Q13562 356 aa13.71□□□□□ -0.21
CAPRIN1-206ENST00000528948 HAX1O00165 279 aa13.7□□□□□ -0.22
CAPRIN1-206ENST00000528948 PRKAR2AP13861 404 aaKnown RBP13.65□□□□□ -0.22
CAPRIN1-206ENST00000528948 EVX2Q03828 476 aa13.62□□□□□ -0.23
CAPRIN1-206ENST00000528948 DIEXFQ68CQ4 756 aaKnown RBP13.62□□□□□ -0.23
CAPRIN1-206ENST00000528948 PLEKHG5O94827 1062 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms