RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 SPACA4Q8TDM5 124 aa2.17□□□□□ -2.06
ATG3-207ENST00000494571 ZNF469Q96JG9 3925 aaPredicted RBP2.16□□□□□ -2.06
ATG3-207ENST00000494571 FLNBO75369 2602 aaKnown RBP2.16□□□□□ -2.06
ATG3-207ENST00000494571 KRTAP1-5Q9BYS1 174 aa2.16□□□□□ -2.06
ATG3-207ENST00000494571 NSD1Q96L73 2696 aaPredicted RBP2.16□□□□□ -2.06
ATG3-207ENST00000494571 KRTAP13-4Q3LI77 160 aa2.15□□□□□ -2.07
ATG3-207ENST00000494571 DNAH1Q9P2D7 4330 aa2.15□□□□□ -2.07
ATG3-207ENST00000494571 UBE2DNLQ8IWF7 75 aa2.14□□□□□ -2.07
ATG3-207ENST00000494571 DNAH10Q8IVF4 4471 aa2.13□□□□□ -2.07
ATG3-207ENST00000494571 PLAC4Q8WY50 150 aa2.13□□□□□ -2.07
ATG3-207ENST00000494571 SMR3AQ99954 134 aa2.13□□□□□ -2.07
ATG3-207ENST00000494571 S4R3F8 94 aa2.13□□□□□ -2.07
ATG3-207ENST00000494571 LYSTQ99698 3801 aa2.12□□□□□ -2.07
ATG3-207ENST00000494571 STAB1Q9NY15 2570 aa2.12□□□□□ -2.07
ATG3-207ENST00000494571 ANK3Q12955 4377 aaKnown RBP2.12□□□□□ -2.07
ATG3-207ENST00000494571 TENM1Q9UKZ4 2725 aa2.12□□□□□ -2.07
ATG3-207ENST00000494571 KRTAP12-2P59991 146 aa2.11□□□□□ -2.07
ATG3-207ENST00000494571 KRTAP3-1Q9BYR8 98 aa2.11□□□□□ -2.07
ATG3-207ENST00000494571 KRTAP10-7P60409 375 aaPredicted RBP2.1□□□□□ -2.07
ATG3-207ENST00000494571 FRAS1Q86XX4 4008 aa2.1□□□□□ -2.07
ATG3-207ENST00000494571 C9orf92A6NGG3 77 aa2.09□□□□□ -2.08
ATG3-207ENST00000494571 CAMK2N1Q7Z7J9 78 aa2.09□□□□□ -2.08
ATG3-207ENST00000494571 KRTAP10-11P60412 298 aa2.08□□□□□ -2.08
ATG3-207ENST00000494571 DNAH6Q9C0G6 4158 aa2.08□□□□□ -2.08
ATG3-207ENST00000494571 KRTAP10-8P60410 259 aa2.08□□□□□ -2.08
ATG3-207ENST00000494571 MGAM2Q2M2H8 2515 aa2.08□□□□□ -2.08
ATG3-207ENST00000494571 KRTAP10-6P60371 365 aaPredicted RBP2.07□□□□□ -2.08
ATG3-207ENST00000494571 KRTAP5-5Q701N2 237 aaPredicted RBP2.07□□□□□ -2.08
ATG3-207ENST00000494571 HERC2O95714 4834 aa2.07□□□□□ -2.08
ATG3-207ENST00000494571 RYR3Q15413 4870 aa2.05□□□□□ -2.08
ATG3-207ENST00000494571 KRTAP13-2Q52LG2 175 aa2.05□□□□□ -2.08
ATG3-207ENST00000494571 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
ATG3-207ENST00000494571 DNAH17Q9UFH2 4485 aa2.04□□□□□ -2.08
ATG3-207ENST00000494571 KRTAP12-1P59990 96 aa2.04□□□□□ -2.08
ATG3-207ENST00000494571 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
ATG3-207ENST00000494571 DNAH8Q96JB1 4490 aa2.03□□□□□ -2.08
ATG3-207ENST00000494571 R4GN34 69 aa2.02□□□□□ -2.09
ATG3-207ENST00000494571 FAT2Q9NYQ8 4349 aa2.01□□□□□ -2.09
ATG3-207ENST00000494571 DNAH9Q9NYC9 4486 aa2.01□□□□□ -2.09
ATG3-207ENST00000494571 Q6ZRN7 208 aaPredicted RBP2□□□□□ -2.09
ATG3-207ENST00000494571 PRO2289Q9P1D8 64 aa2□□□□□ -2.09
ATG3-207ENST00000494571 VPS13DQ5THJ4 4388 aa2□□□□□ -2.09
ATG3-207ENST00000494571 LRP1BQ9NZR2 4599 aa2□□□□□ -2.09
ATG3-207ENST00000494571 RYR2Q92736 4967 aa2□□□□□ -2.09
ATG3-207ENST00000494571 A0A1B0GVY2 172 aa1.99□□□□□ -2.09
ATG3-207ENST00000494571 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
ATG3-207ENST00000494571 DNAH7Q8WXX0 4024 aa1.98□□□□□ -2.09
ATG3-207ENST00000494571 KMT2AQ03164 3969 aa1.97□□□□□ -2.09
ATG3-207ENST00000494571 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
ATG3-207ENST00000494571 LCE1EQ5T753 118 aa1.96□□□□□ -2.1
ATG3-207ENST00000494571 CMYA5Q8N3K9 4069 aa1.96□□□□□ -2.1
ATG3-207ENST00000494571 PRKDCP78527 4128 aaKnown RBP1.95□□□□□ -2.1
ATG3-207ENST00000494571 DYNC1H1Q14204 4646 aaKnown RBP1.94□□□□□ -2.1
ATG3-207ENST00000494571 M0QZ58 72 aa1.93□□□□□ -2.1
ATG3-207ENST00000494571 PCLOQ9Y6V0 5065 aa1.93□□□□□ -2.1
ATG3-207ENST00000494571 KRTAP1-4P0C5Y4 121 aa1.93□□□□□ -2.1
ATG3-207ENST00000494571 HUWE1Q7Z6Z7 4374 aaKnown RBP1.93□□□□□ -2.1
ATG3-207ENST00000494571 KRTAP23-1A1A580 65 aa1.92□□□□□ -2.1
ATG3-207ENST00000494571 SACSQ9NZJ4 4579 aa1.92□□□□□ -2.1
ATG3-207ENST00000494571 FAT3Q8TDW7 4589 aa1.91□□□□□ -2.1
ATG3-207ENST00000494571 HECTD4Q9Y4D8 3996 aa1.9□□□□□ -2.1
ATG3-207ENST00000494571 DNAH11Q96DT5 4516 aa1.9□□□□□ -2.1
ATG3-207ENST00000494571 PKHD1P08F94 4074 aa1.89□□□□□ -2.11
ATG3-207ENST00000494571 DNAH2Q9P225 4427 aa1.87□□□□□ -2.11
ATG3-207ENST00000494571 KIAA1109Q2LD37 5005 aa1.87□□□□□ -2.11
ATG3-207ENST00000494571 VPS13BQ7Z7G8 4022 aa1.87□□□□□ -2.11
ATG3-207ENST00000494571 INE1O15225 51 aa1.87□□□□□ -2.11
ATG3-207ENST00000494571 PP632Q6XCG6 107 aa1.87□□□□□ -2.11
ATG3-207ENST00000494571 KMT2CQ8NEZ4 4911 aaKnown RBP1.86□□□□□ -2.11
ATG3-207ENST00000494571 PLECQ15149 4684 aaKnown RBP1.85□□□□□ -2.11
ATG3-207ENST00000494571 KRTAP10-1P60331 282 aa1.85□□□□□ -2.11
ATG3-207ENST00000494571 PKHD1L1Q86WI1 4243 aa1.84□□□□□ -2.12
ATG3-207ENST00000494571 APOBP04114 4563 aaKnown RBP1.83□□□□□ -2.12
ATG3-207ENST00000494571 SMR3BP02814 79 aaPredicted RBP1.83□□□□□ -2.12
ATG3-207ENST00000494571 EPPK1P58107 5090 aaKnown RBP1.83□□□□□ -2.12
ATG3-207ENST00000494571 HYDINQ4G0P3 5121 aa1.82□□□□□ -2.12
ATG3-207ENST00000494571 MYCBP2O75592 4640 aa1.81□□□□□ -2.12
ATG3-207ENST00000494571 SPRR5A0A1B0GTR4 108 aa1.81□□□□□ -2.12
ATG3-207ENST00000494571 RPS29P62273 56 aaKnown RBP1.81□□□□□ -2.12
ATG3-207ENST00000494571 GPR98Q8WXG9 6306 aa1.81□□□□□ -2.12
ATG3-207ENST00000494571 RYR1P21817 5038 aa1.8□□□□□ -2.12
ATG3-207ENST00000494571 STARD9Q9P2P6 4700 aa1.78□□□□□ -2.12
ATG3-207ENST00000494571 TNP1P09430 55 aa1.77□□□□□ -2.13
ATG3-207ENST00000494571 TNXBP22105 4242 aa1.76□□□□□ -2.13
ATG3-207ENST00000494571 DNAH5Q8TE73 4624 aa1.75□□□□□ -2.13
ATG3-207ENST00000494571 ABCA13Q86UQ4 5058 aa1.74□□□□□ -2.13
ATG3-207ENST00000494571 FAT1Q14517 4588 aa1.74□□□□□ -2.13
ATG3-207ENST00000494571 Q5VSD8 79 aa1.74□□□□□ -2.13
ATG3-207ENST00000494571 HSPG2P98160 4391 aa1.73□□□□□ -2.13
ATG3-207ENST00000494571 LRP1Q07954 4544 aaKnown RBP1.71□□□□□ -2.14
ATG3-207ENST00000494571 KRTAP10-4P60372 401 aaPredicted RBP1.71□□□□□ -2.14
ATG3-207ENST00000494571 LPAP08519 4548 aa1.71□□□□□ -2.14
ATG3-207ENST00000494571 HERC1Q15751 4861 aa1.71□□□□□ -2.14
ATG3-207ENST00000494571 PKD1P98161 4303 aa1.69□□□□□ -2.14
ATG3-207ENST00000494571 CRCT1Q9UGL9 99 aa1.68□□□□□ -2.14
ATG3-207ENST00000494571 MT1HL1P0DM35 61 aa1.67□□□□□ -2.14
ATG3-207ENST00000494571 HMCN2Q8NDA2 5059 aa1.67□□□□□ -2.14
ATG3-207ENST00000494571 MUC17Q685J3 4493 aa1.67□□□□□ -2.14
ATG3-207ENST00000494571 LCE3AQ5TA76 89 aa1.65□□□□□ -2.15
ATG3-207ENST00000494571 LRP2P98164 4655 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms