RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 H0YAA0 97 aa2.2□□□□□ -2.06
CMSS1-204ENST00000479555 Q6ZSA8 131 aa2.2□□□□□ -2.06
CMSS1-204ENST00000479555 KRTAP13-1Q8IUC0 172 aa2.2□□□□□ -2.06
CMSS1-204ENST00000479555 HIVEP2P31629 2446 aa2.2□□□□□ -2.06
CMSS1-204ENST00000479555 TENM1Q9UKZ4 2725 aa2.19□□□□□ -2.06
CMSS1-204ENST00000479555 DEFB4AO15263 64 aa2.19□□□□□ -2.06
CMSS1-204ENST00000479555 DNAH3Q8TD57 4116 aa2.19□□□□□ -2.06
CMSS1-204ENST00000479555 JMJD1CQ15652 2540 aa2.18□□□□□ -2.06
CMSS1-204ENST00000479555 VWFP04275 2813 aa2.17□□□□□ -2.06
CMSS1-204ENST00000479555 SPINK6Q6UWN8 80 aa2.17□□□□□ -2.06
CMSS1-204ENST00000479555 C2CD3Q4AC94 2353 aa2.17□□□□□ -2.06
CMSS1-204ENST00000479555 PKD1L1Q8TDX9 2849 aa2.17□□□□□ -2.06
CMSS1-204ENST00000479555 ATRQ13535 2644 aa2.16□□□□□ -2.06
CMSS1-204ENST00000479555 NBDYA0A0U1RRE5 68 aa2.16□□□□□ -2.06
CMSS1-204ENST00000479555 K7EIL1 84 aa2.15□□□□□ -2.07
CMSS1-204ENST00000479555 SPINK1P00995 79 aa2.15□□□□□ -2.07
CMSS1-204ENST00000479555 STAB1Q9NY15 2570 aa2.15□□□□□ -2.07
CMSS1-204ENST00000479555 COL6A5A8TX70 2615 aa2.15□□□□□ -2.07
CMSS1-204ENST00000479555 KRTAP10-10P60014 251 aa2.14□□□□□ -2.07
CMSS1-204ENST00000479555 PRKDCP78527 4128 aaKnown RBP2.13□□□□□ -2.07
CMSS1-204ENST00000479555 RPS29P62273 56 aaKnown RBP2.12□□□□□ -2.07
CMSS1-204ENST00000479555 CIRBP-AS1Q8TBR5 109 aa2.12□□□□□ -2.07
CMSS1-204ENST00000479555 SPACA4Q8TDM5 124 aa2.12□□□□□ -2.07
CMSS1-204ENST00000479555 DNAH9Q9NYC9 4486 aa2.12□□□□□ -2.07
CMSS1-204ENST00000479555 UBE2DNLQ8IWF7 75 aa2.11□□□□□ -2.07
CMSS1-204ENST00000479555 NBEAL1Q6ZS30 2694 aa2.11□□□□□ -2.07
CMSS1-204ENST00000479555 HUWE1Q7Z6Z7 4374 aaKnown RBP2.1□□□□□ -2.07
CMSS1-204ENST00000479555 PLAC4Q8WY50 150 aa2.1□□□□□ -2.07
CMSS1-204ENST00000479555 DNAH7Q8WXX0 4024 aa2.09□□□□□ -2.07
CMSS1-204ENST00000479555 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.07
CMSS1-204ENST00000479555 MEGF8Q7Z7M0 2845 aa2.09□□□□□ -2.08
CMSS1-204ENST00000479555 COL7A1Q02388 2944 aa2.08□□□□□ -2.08
CMSS1-204ENST00000479555 TPRXLQ17RH7 258 aa2.08□□□□□ -2.08
CMSS1-204ENST00000479555 ALMS1Q8TCU4 4167 aa2.07□□□□□ -2.08
CMSS1-204ENST00000479555 NOTCH1P46531 2555 aa2.06□□□□□ -2.08
CMSS1-204ENST00000479555 LYSTQ99698 3801 aa2.06□□□□□ -2.08
CMSS1-204ENST00000479555 MGAM2Q2M2H8 2515 aa2.05□□□□□ -2.08
CMSS1-204ENST00000479555 KRTAP21-3Q3LHN1 58 aa2.05□□□□□ -2.08
CMSS1-204ENST00000479555 APLNQ9ULZ1 77 aa2.05□□□□□ -2.08
CMSS1-204ENST00000479555 TGP01266 2768 aa2.05□□□□□ -2.08
CMSS1-204ENST00000479555 DYNC2H1Q8NCM8 4307 aaKnown RBP2.05□□□□□ -2.08
CMSS1-204ENST00000479555 NBEAL2Q6ZNJ1 2754 aa2.04□□□□□ -2.08
CMSS1-204ENST00000479555 CSMD3Q7Z407 3707 aa2.04□□□□□ -2.08
CMSS1-204ENST00000479555 M0QZ58 72 aa2.04□□□□□ -2.08
CMSS1-204ENST00000479555 S4R3F8 94 aa2.04□□□□□ -2.08
CMSS1-204ENST00000479555 FBN3Q75N90 2809 aa2.04□□□□□ -2.08
CMSS1-204ENST00000479555 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
CMSS1-204ENST00000479555 PRO2289Q9P1D8 64 aa2.03□□□□□ -2.08
CMSS1-204ENST00000479555 PLECQ15149 4684 aaKnown RBP2.03□□□□□ -2.08
CMSS1-204ENST00000479555 DNAH1Q9P2D7 4330 aa2.02□□□□□ -2.09
CMSS1-204ENST00000479555 INE1O15225 51 aa2.02□□□□□ -2.09
CMSS1-204ENST00000479555 STARD9Q9P2P6 4700 aa2.02□□□□□ -2.09
CMSS1-204ENST00000479555 TENM3Q9P273 2699 aa2.01□□□□□ -2.09
CMSS1-204ENST00000479555 SACSQ9NZJ4 4579 aa2.01□□□□□ -2.09
CMSS1-204ENST00000479555 TENM2Q9NT68 2774 aa2□□□□□ -2.09
CMSS1-204ENST00000479555 VPS13DQ5THJ4 4388 aa2□□□□□ -2.09
CMSS1-204ENST00000479555 FRAS1Q86XX4 4008 aa2□□□□□ -2.09
CMSS1-204ENST00000479555 DNAH10Q8IVF4 4471 aa1.99□□□□□ -2.09
CMSS1-204ENST00000479555 A0A0D9SG42 100 aa1.99□□□□□ -2.09
CMSS1-204ENST00000479555 SPRR5A0A1B0GTR4 108 aa1.99□□□□□ -2.09
CMSS1-204ENST00000479555 Q6ZRN7 208 aaPredicted RBP1.99□□□□□ -2.09
CMSS1-204ENST00000479555 KMT2AQ03164 3969 aa1.99□□□□□ -2.09
CMSS1-204ENST00000479555 DNAH6Q9C0G6 4158 aa1.99□□□□□ -2.09
CMSS1-204ENST00000479555 DNAH2Q9P225 4427 aa1.98□□□□□ -2.09
CMSS1-204ENST00000479555 C10orf95Q9H7T3 257 aa1.98□□□□□ -2.09
CMSS1-204ENST00000479555 HYDINQ4G0P3 5121 aa1.97□□□□□ -2.09
CMSS1-204ENST00000479555 STAB2Q8WWQ8 2551 aa1.96□□□□□ -2.1
CMSS1-204ENST00000479555 KRTAP13-2Q52LG2 175 aa1.95□□□□□ -2.1
CMSS1-204ENST00000479555 KMT2CQ8NEZ4 4911 aaKnown RBP1.95□□□□□ -2.1
CMSS1-204ENST00000479555 HECTD4Q9Y4D8 3996 aa1.94□□□□□ -2.1
CMSS1-204ENST00000479555 KRTAP12-1P59990 96 aa1.94□□□□□ -2.1
CMSS1-204ENST00000479555 FAT2Q9NYQ8 4349 aa1.93□□□□□ -2.1
CMSS1-204ENST00000479555 DNAH11Q96DT5 4516 aa1.93□□□□□ -2.1
CMSS1-204ENST00000479555 DNAH17Q9UFH2 4485 aa1.93□□□□□ -2.1
CMSS1-204ENST00000479555 RYR3Q15413 4870 aa1.92□□□□□ -2.1
CMSS1-204ENST00000479555 PKD1P98161 4303 aa1.92□□□□□ -2.1
CMSS1-204ENST00000479555 PKHD1P08F94 4074 aa1.91□□□□□ -2.1
CMSS1-204ENST00000479555 KRTAP13-4Q3LI77 160 aa1.91□□□□□ -2.1
CMSS1-204ENST00000479555 RYR2Q92736 4967 aa1.9□□□□□ -2.1
CMSS1-204ENST00000479555 R4GN34 69 aa1.9□□□□□ -2.11
CMSS1-204ENST00000479555 DNAH5Q8TE73 4624 aa1.89□□□□□ -2.11
CMSS1-204ENST00000479555 DNAH8Q96JB1 4490 aa1.87□□□□□ -2.11
CMSS1-204ENST00000479555 DYNC1H1Q14204 4646 aaKnown RBP1.87□□□□□ -2.11
CMSS1-204ENST00000479555 Q5VSD8 79 aa1.87□□□□□ -2.11
CMSS1-204ENST00000479555 LRP1BQ9NZR2 4599 aa1.86□□□□□ -2.11
CMSS1-204ENST00000479555 C9orf92A6NGG3 77 aa1.85□□□□□ -2.11
CMSS1-204ENST00000479555 EPPK1P58107 5090 aaKnown RBP1.85□□□□□ -2.11
CMSS1-204ENST00000479555 APOBP04114 4563 aaKnown RBP1.84□□□□□ -2.11
CMSS1-204ENST00000479555 FLG2Q5D862 2391 aaPredicted RBP1.84□□□□□ -2.11
CMSS1-204ENST00000479555 HSPG2P98160 4391 aa1.84□□□□□ -2.12
CMSS1-204ENST00000479555 TNP1P09430 55 aa1.83□□□□□ -2.12
CMSS1-204ENST00000479555 PKHD1L1Q86WI1 4243 aa1.81□□□□□ -2.12
CMSS1-204ENST00000479555 VPS13BQ7Z7G8 4022 aa1.81□□□□□ -2.12
CMSS1-204ENST00000479555 FAT1Q14517 4588 aa1.81□□□□□ -2.12
CMSS1-204ENST00000479555 BIRC6Q9NR09 4857 aa1.76□□□□□ -2.13
CMSS1-204ENST00000479555 RYR1P21817 5038 aa1.76□□□□□ -2.13
CMSS1-204ENST00000479555 KIAA1109Q2LD37 5005 aa1.76□□□□□ -2.13
CMSS1-204ENST00000479555 FAT3Q8TDW7 4589 aa1.75□□□□□ -2.13
CMSS1-204ENST00000479555 CRCT1Q9UGL9 99 aa1.75□□□□□ -2.13
CMSS1-204ENST00000479555 SRRM2Q9UQ35 2752 aaKnown RBP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 280 ms