RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 KRTAP6-2Q3LI66 62 aa0.81□□□□□ -2.28
PTP4A1P1-201ENST00000420539 KRTAP8-1Q8IUC2 63 aa0.81□□□□□ -2.28
PTP4A1P1-201ENST00000420539 FLGP20930 4061 aaPredicted RBP0.8□□□□□ -2.28
PTP4A1P1-201ENST00000420539 NBEAQ8NFP9 2946 aa0.8□□□□□ -2.28
PTP4A1P1-201ENST00000420539 HIVEP1P15822 2718 aa0.8□□□□□ -2.28
PTP4A1P1-201ENST00000420539 NBPF19A0A087WUL8 3843 aa0.79□□□□□ -2.28
PTP4A1P1-201ENST00000420539 ZFHX4Q86UP3 3567 aa0.79□□□□□ -2.28
PTP4A1P1-201ENST00000420539 APOBP04114 4563 aaKnown RBP0.79□□□□□ -2.28
PTP4A1P1-201ENST00000420539 CD52P31358 61 aa0.79□□□□□ -2.28
PTP4A1P1-201ENST00000420539 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
PTP4A1P1-201ENST00000420539 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
PTP4A1P1-201ENST00000420539 CELSR3Q9NYQ7 3312 aa0.79□□□□□ -2.28
PTP4A1P1-201ENST00000420539 FASNP49327 2511 aaKnown RBP0.78□□□□□ -2.28
PTP4A1P1-201ENST00000420539 MT1AP04731 61 aa0.78□□□□□ -2.28
PTP4A1P1-201ENST00000420539 HTN3P15516 51 aa0.78□□□□□ -2.28
PTP4A1P1-201ENST00000420539 SPRR2AP35326 72 aa0.78□□□□□ -2.28
PTP4A1P1-201ENST00000420539 ITPR3Q14573 2671 aa0.78□□□□□ -2.29
PTP4A1P1-201ENST00000420539 DEFB133Q30KQ1 61 aa0.76□□□□□ -2.29
PTP4A1P1-201ENST00000420539 DEFB124Q8NES8 71 aa0.76□□□□□ -2.29
PTP4A1P1-201ENST00000420539 ZANQ9Y493 2812 aa0.76□□□□□ -2.29
PTP4A1P1-201ENST00000420539 TENM3Q9P273 2699 aa0.76□□□□□ -2.29
PTP4A1P1-201ENST00000420539 TEP1Q99973 2627 aaKnown RBP0.76□□□□□ -2.29
PTP4A1P1-201ENST00000420539 LRP1BQ9NZR2 4599 aa0.76□□□□□ -2.29
PTP4A1P1-201ENST00000420539 DNAH6Q9C0G6 4158 aa0.75□□□□□ -2.29
PTP4A1P1-201ENST00000420539 DNAH7Q8WXX0 4024 aa0.75□□□□□ -2.29
PTP4A1P1-201ENST00000420539 LINC01556Q5JQF7 62 aa0.75□□□□□ -2.29
PTP4A1P1-201ENST00000420539 SPTBN5Q9NRC6 3674 aaKnown RBP0.75□□□□□ -2.29
PTP4A1P1-201ENST00000420539 MYO18BQ8IUG5 2567 aa0.75□□□□□ -2.29
PTP4A1P1-201ENST00000420539 LAMA5O15230 3695 aa0.74□□□□□ -2.29
PTP4A1P1-201ENST00000420539 COL6A3P12111 3177 aa0.72□□□□□ -2.29
PTP4A1P1-201ENST00000420539 TLN2Q9Y4G6 2542 aa0.72□□□□□ -2.29
PTP4A1P1-201ENST00000420539 AKAP9Q99996 3911 aa0.71□□□□□ -2.3
PTP4A1P1-201ENST00000420539 WDR87Q6ZQQ6 2873 aa0.71□□□□□ -2.3
PTP4A1P1-201ENST00000420539 FAT3Q8TDW7 4589 aa0.71□□□□□ -2.3
PTP4A1P1-201ENST00000420539 FAT4Q6V0I7 4981 aa0.71□□□□□ -2.3
PTP4A1P1-201ENST00000420539 PKHD1P08F94 4074 aa0.71□□□□□ -2.3
PTP4A1P1-201ENST00000420539 MGAQ8IWI9 3026 aa0.7□□□□□ -2.3
PTP4A1P1-201ENST00000420539 HTTP42858 3142 aa0.7□□□□□ -2.3
PTP4A1P1-201ENST00000420539 MAST4O15021 2626 aa0.69□□□□□ -2.3
PTP4A1P1-201ENST00000420539 SVEP1Q4LDE5 3571 aa0.69□□□□□ -2.3
PTP4A1P1-201ENST00000420539 DEFB4AO15263 64 aa0.69□□□□□ -2.3
PTP4A1P1-201ENST00000420539 HMCN2Q8NDA2 5059 aa0.69□□□□□ -2.3
PTP4A1P1-201ENST00000420539 TRIOO75962 3097 aa0.68□□□□□ -2.3
PTP4A1P1-201ENST00000420539 USP9XQ93008 2570 aaPredicted RBP0.68□□□□□ -2.3
PTP4A1P1-201ENST00000420539 TGP01266 2768 aa0.68□□□□□ -2.3
PTP4A1P1-201ENST00000420539 SMR3BP02814 79 aaPredicted RBP0.68□□□□□ -2.3
PTP4A1P1-201ENST00000420539 RPS29P62273 56 aaKnown RBP0.67□□□□□ -2.3
PTP4A1P1-201ENST00000420539 KRTAP19-5Q3LI72 72 aa0.67□□□□□ -2.3
PTP4A1P1-201ENST00000420539 FLNAP21333 2647 aaKnown RBP0.67□□□□□ -2.3
PTP4A1P1-201ENST00000420539 DNAH1Q9P2D7 4330 aa0.66□□□□□ -2.3
PTP4A1P1-201ENST00000420539 SPRR2EP22531 72 aa0.66□□□□□ -2.3
PTP4A1P1-201ENST00000420539 FAT1Q14517 4588 aa0.65□□□□□ -2.31
PTP4A1P1-201ENST00000420539 RELNP78509 3460 aa0.65□□□□□ -2.31
PTP4A1P1-201ENST00000420539 SPRR2FQ96RM1 72 aa0.64□□□□□ -2.31
PTP4A1P1-201ENST00000420539 MAP1AP78559 2803 aaPredicted RBP0.64□□□□□ -2.31
PTP4A1P1-201ENST00000420539 CEP250Q9BV73 2442 aa0.63□□□□□ -2.31
PTP4A1P1-201ENST00000420539 LAMA1P25391 3075 aa0.63□□□□□ -2.31
PTP4A1P1-201ENST00000420539 DNAH10Q8IVF4 4471 aa0.63□□□□□ -2.31
PTP4A1P1-201ENST00000420539 CFAP54Q96N23 3096 aa0.63□□□□□ -2.31
PTP4A1P1-201ENST00000420539 MXRA5Q9NR99 2828 aa0.62□□□□□ -2.31
PTP4A1P1-201ENST00000420539 MGAM2Q2M2H8 2515 aa0.61□□□□□ -2.31
PTP4A1P1-201ENST00000420539 CSMD1Q96PZ7 3565 aa0.6□□□□□ -2.31
PTP4A1P1-201ENST00000420539 DMXL2Q8TDJ6 3036 aa0.6□□□□□ -2.31
PTP4A1P1-201ENST00000420539 ITPR1Q14643 2758 aa0.59□□□□□ -2.32
PTP4A1P1-201ENST00000420539 PLECQ15149 4684 aaKnown RBP0.57□□□□□ -2.32
PTP4A1P1-201ENST00000420539 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
PTP4A1P1-201ENST00000420539 ADGRG4Q8IZF6 3080 aa0.57□□□□□ -2.32
PTP4A1P1-201ENST00000420539 FRYLO94915 3013 aa0.56□□□□□ -2.32
PTP4A1P1-201ENST00000420539 CEP350Q5VT06 3117 aa0.55□□□□□ -2.32
PTP4A1P1-201ENST00000420539 PRUNE2Q8WUY3 3088 aa0.55□□□□□ -2.32
PTP4A1P1-201ENST00000420539 NIPBLQ6KC79 2804 aaeCLIP0.55□□□□□ -2.32
PTP4A1P1-201ENST00000420539 LRP2P98164 4655 aa0.55□□□□□ -2.32
PTP4A1P1-201ENST00000420539 CFAP46Q8IYW2 2715 aa0.54□□□□□ -2.32
PTP4A1P1-201ENST00000420539 LAMA3Q16787 3333 aa0.54□□□□□ -2.32
PTP4A1P1-201ENST00000420539 AHNAKQ09666 5890 aaKnown RBP0.54□□□□□ -2.32
PTP4A1P1-201ENST00000420539 CENPEQ02224 2701 aa0.53□□□□□ -2.32
PTP4A1P1-201ENST00000420539 LRBAP50851 2863 aa0.53□□□□□ -2.32
PTP4A1P1-201ENST00000420539 NBEAL1Q6ZS30 2694 aa0.51□□□□□ -2.33
PTP4A1P1-201ENST00000420539 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
PTP4A1P1-201ENST00000420539 DNAH12Q6ZR08 3092 aa0.51□□□□□ -2.33
PTP4A1P1-201ENST00000420539 BOD1L1Q8NFC6 3051 aa0.51□□□□□ -2.33
PTP4A1P1-201ENST00000420539 C5orf42Q9H799 3197 aa0.51□□□□□ -2.33
PTP4A1P1-201ENST00000420539 STAB2Q8WWQ8 2551 aa0.51□□□□□ -2.33
PTP4A1P1-201ENST00000420539 HERC1Q15751 4861 aa0.5□□□□□ -2.33
PTP4A1P1-201ENST00000420539 CMYA5Q8N3K9 4069 aa0.5□□□□□ -2.33
PTP4A1P1-201ENST00000420539 SPTAN1Q13813 2472 aaKnown RBP0.5□□□□□ -2.33
PTP4A1P1-201ENST00000420539 DOPEY1Q5JWR5 2465 aa0.5□□□□□ -2.33
PTP4A1P1-201ENST00000420539 ATMQ13315 3056 aa0.5□□□□□ -2.33
PTP4A1P1-201ENST00000420539 TEX15Q9BXT5 2789 aa0.49□□□□□ -2.33
PTP4A1P1-201ENST00000420539 ITPR2Q14571 2701 aa0.48□□□□□ -2.33
PTP4A1P1-201ENST00000420539 CEP295Q9C0D2 2601 aa0.46□□□□□ -2.34
PTP4A1P1-201ENST00000420539 CFAP47Q6ZTR5 3102 aa0.46□□□□□ -2.34
PTP4A1P1-201ENST00000420539 TLN1Q9Y490 2541 aaKnown RBP0.46□□□□□ -2.34
PTP4A1P1-201ENST00000420539 MKI67P46013 3256 aaKnown RBP0.46□□□□□ -2.34
PTP4A1P1-201ENST00000420539 WDFY4Q6ZS81 3184 aa0.45□□□□□ -2.34
PTP4A1P1-201ENST00000420539 VPS13AQ96RL7 3174 aa0.45□□□□□ -2.34
PTP4A1P1-201ENST00000420539 DYNC1H1Q14204 4646 aaKnown RBP0.45□□□□□ -2.34
PTP4A1P1-201ENST00000420539 DCHS1Q96JQ0 3298 aa0.44□□□□□ -2.34
PTP4A1P1-201ENST00000420539 LAMA2P24043 3122 aaKnown RBP0.44□□□□□ -2.34
PTP4A1P1-201ENST00000420539 FREM2Q5SZK8 3169 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms