RNA–Protein interactions for RNA: ENST00000417942.5

XIST-202, X inactive specific transcript, humanhuman

TSL 3

Gene XIST, Length 724 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-202ENST00000417942 CSMD3Q7Z407 3707 aa2.31□□□□□ -2.04
XIST-202ENST00000417942 ANK2Q01484 3957 aa2.31□□□□□ -2.04
XIST-202ENST00000417942 USP24Q9UPU5 2620 aa2.31□□□□□ -2.04
XIST-202ENST00000417942 TGP01266 2768 aa2.31□□□□□ -2.04
XIST-202ENST00000417942 PRKDCP78527 4128 aaKnown RBP2.31□□□□□ -2.04
XIST-202ENST00000417942 WDFY3Q8IZQ1 3526 aa2.3□□□□□ -2.04
XIST-202ENST00000417942 KMT2AQ03164 3969 aa2.3□□□□□ -2.04
XIST-202ENST00000417942 TENM4Q6N022 2769 aa2.3□□□□□ -2.04
XIST-202ENST00000417942 DYNC2H1Q8NCM8 4307 aaKnown RBP2.29□□□□□ -2.04
XIST-202ENST00000417942 CACNA1AO00555 2505 aa2.29□□□□□ -2.04
XIST-202ENST00000417942 CMYA5Q8N3K9 4069 aa2.29□□□□□ -2.04
XIST-202ENST00000417942 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
XIST-202ENST00000417942 TLN1Q9Y490 2541 aaKnown RBP2.28□□□□□ -2.04
XIST-202ENST00000417942 VPS13BQ7Z7G8 4022 aa2.28□□□□□ -2.04
XIST-202ENST00000417942 ANK3Q12955 4377 aaKnown RBP2.28□□□□□ -2.05
XIST-202ENST00000417942 CENPEQ02224 2701 aa2.27□□□□□ -2.05
XIST-202ENST00000417942 DNAH10Q8IVF4 4471 aa2.27□□□□□ -2.05
XIST-202ENST00000417942 USP9XQ93008 2570 aaPredicted RBP2.27□□□□□ -2.05
XIST-202ENST00000417942 VCANP13611 3396 aa2.27□□□□□ -2.05
XIST-202ENST00000417942 CFAP46Q8IYW2 2715 aa2.26□□□□□ -2.05
XIST-202ENST00000417942 DNAH7Q8WXX0 4024 aa2.26□□□□□ -2.05
XIST-202ENST00000417942 ASPMQ8IZT6 3477 aa2.26□□□□□ -2.05
XIST-202ENST00000417942 BDP1A6H8Y1 2624 aa2.25□□□□□ -2.05
XIST-202ENST00000417942 BRCA2P51587 3418 aa2.25□□□□□ -2.05
XIST-202ENST00000417942 FBN3Q75N90 2809 aa2.24□□□□□ -2.05
XIST-202ENST00000417942 SETXQ7Z333 2677 aaKnown RBP2.24□□□□□ -2.05
XIST-202ENST00000417942 KRTAP8-1Q8IUC2 63 aa2.24□□□□□ -2.05
XIST-202ENST00000417942 HUWE1Q7Z6Z7 4374 aaKnown RBP2.24□□□□□ -2.05
XIST-202ENST00000417942 CHD8Q9HCK8 2581 aa2.23□□□□□ -2.05
XIST-202ENST00000417942 DNAH6Q9C0G6 4158 aa2.23□□□□□ -2.05
XIST-202ENST00000417942 EPG5Q9HCE0 2579 aa2.23□□□□□ -2.05
XIST-202ENST00000417942 ADGRG4Q8IZF6 3080 aa2.23□□□□□ -2.05
XIST-202ENST00000417942 DNAH9Q9NYC9 4486 aa2.23□□□□□ -2.05
XIST-202ENST00000417942 ZANQ9Y493 2812 aa2.22□□□□□ -2.05
XIST-202ENST00000417942 FLGP20930 4061 aaPredicted RBP2.22□□□□□ -2.05
XIST-202ENST00000417942 DOPEY1Q5JWR5 2465 aa2.22□□□□□ -2.05
XIST-202ENST00000417942 DNAH17Q9UFH2 4485 aa2.21□□□□□ -2.06
XIST-202ENST00000417942 SPTAN1Q13813 2472 aaKnown RBP2.2□□□□□ -2.06
XIST-202ENST00000417942 FBN2P35556 2912 aa2.2□□□□□ -2.06
XIST-202ENST00000417942 ACANP16112 2415 aa2.2□□□□□ -2.06
XIST-202ENST00000417942 PKHD1L1Q86WI1 4243 aa2.2□□□□□ -2.06
XIST-202ENST00000417942 ITPR2Q14571 2701 aa2.19□□□□□ -2.06
XIST-202ENST00000417942 TLN2Q9Y4G6 2542 aa2.19□□□□□ -2.06
XIST-202ENST00000417942 FLNCQ14315 2725 aa2.19□□□□□ -2.06
XIST-202ENST00000417942 NBEAL1Q6ZS30 2694 aa2.19□□□□□ -2.06
XIST-202ENST00000417942 PKD1P98161 4303 aa2.19□□□□□ -2.06
XIST-202ENST00000417942 MXRA5Q9NR99 2828 aa2.18□□□□□ -2.06
XIST-202ENST00000417942 HECTD4Q9Y4D8 3996 aa2.17□□□□□ -2.06
XIST-202ENST00000417942 MTORP42345 2549 aa2.17□□□□□ -2.06
XIST-202ENST00000417942 ATRQ13535 2644 aa2.17□□□□□ -2.06
XIST-202ENST00000417942 FAT3Q8TDW7 4589 aa2.17□□□□□ -2.06
XIST-202ENST00000417942 M0R2T5 61 aa2.17□□□□□ -2.06
XIST-202ENST00000417942 CSMD2Q7Z408 3487 aa2.16□□□□□ -2.06
XIST-202ENST00000417942 POLQO75417 2590 aa2.16□□□□□ -2.06
XIST-202ENST00000417942 ZNF469Q96JG9 3925 aaPredicted RBP2.16□□□□□ -2.06
XIST-202ENST00000417942 APOBP04114 4563 aaKnown RBP2.16□□□□□ -2.06
XIST-202ENST00000417942 TEP1Q99973 2627 aaKnown RBP2.16□□□□□ -2.06
XIST-202ENST00000417942 PKD1L1Q8TDX9 2849 aa2.16□□□□□ -2.06
XIST-202ENST00000417942 KRTAP10-4P60372 401 aaPredicted RBP2.15□□□□□ -2.07
XIST-202ENST00000417942 UNC79Q9P2D8 2635 aa2.15□□□□□ -2.07
XIST-202ENST00000417942 NBEAL2Q6ZNJ1 2754 aa2.14□□□□□ -2.07
XIST-202ENST00000417942 HSPG2P98160 4391 aa2.13□□□□□ -2.07
XIST-202ENST00000417942 CDH23Q9H251 3354 aa2.13□□□□□ -2.07
XIST-202ENST00000417942 HRNRQ86YZ3 2850 aaPredicted RBP2.13□□□□□ -2.07
XIST-202ENST00000417942 MYO15AQ9UKN7 3530 aa2.12□□□□□ -2.07
XIST-202ENST00000417942 ZFYVE26Q68DK2 2539 aa2.12□□□□□ -2.07
XIST-202ENST00000417942 STAB2Q8WWQ8 2551 aa2.11□□□□□ -2.07
XIST-202ENST00000417942 GCN1Q92616 2671 aaKnown RBP2.11□□□□□ -2.07
XIST-202ENST00000417942 MYO9AB2RTY4 2548 aa2.1□□□□□ -2.07
XIST-202ENST00000417942 KRTAP12-3P60328 96 aa2.1□□□□□ -2.07
XIST-202ENST00000417942 HIVEP1P15822 2718 aa2.1□□□□□ -2.07
XIST-202ENST00000417942 STAB1Q9NY15 2570 aa2.08□□□□□ -2.08
XIST-202ENST00000417942 DNAH5Q8TE73 4624 aa2.07□□□□□ -2.08
XIST-202ENST00000417942 NSD1Q96L73 2696 aaPredicted RBP2.06□□□□□ -2.08
XIST-202ENST00000417942 SVEP1Q4LDE5 3571 aa2.06□□□□□ -2.08
XIST-202ENST00000417942 NOTCH1P46531 2555 aa2.05□□□□□ -2.08
XIST-202ENST00000417942 VPS13CQ709C8 3753 aa2.05□□□□□ -2.08
XIST-202ENST00000417942 ANKRD11Q6UB99 2663 aaPredicted RBP2.04□□□□□ -2.08
XIST-202ENST00000417942 J3QKU1 62 aa2.04□□□□□ -2.08
XIST-202ENST00000417942 PLECQ15149 4684 aaKnown RBP2.04□□□□□ -2.08
XIST-202ENST00000417942 EYSQ5T1H1 3165 aa2.03□□□□□ -2.08
XIST-202ENST00000417942 TNXBP22105 4242 aa2.02□□□□□ -2.09
XIST-202ENST00000417942 CUBNO60494 3623 aa2.02□□□□□ -2.09
XIST-202ENST00000417942 SMR3BP02814 79 aaPredicted RBP2.01□□□□□ -2.09
XIST-202ENST00000417942 TENM3Q9P273 2699 aa2.01□□□□□ -2.09
XIST-202ENST00000417942 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
XIST-202ENST00000417942 LRP1Q07954 4544 aaKnown RBP1.98□□□□□ -2.09
XIST-202ENST00000417942 FASNP49327 2511 aaKnown RBP1.97□□□□□ -2.09
XIST-202ENST00000417942 FAT2Q9NYQ8 4349 aa1.97□□□□□ -2.09
XIST-202ENST00000417942 FLNAP21333 2647 aaKnown RBP1.97□□□□□ -2.09
XIST-202ENST00000417942 MYO18BQ8IUG5 2567 aa1.96□□□□□ -2.1
XIST-202ENST00000417942 DYNC1H1Q14204 4646 aaKnown RBP1.95□□□□□ -2.1
XIST-202ENST00000417942 PKHD1P08F94 4074 aa1.93□□□□□ -2.1
XIST-202ENST00000417942 CEP295Q9C0D2 2601 aa1.93□□□□□ -2.1
XIST-202ENST00000417942 ACACBO00763 2458 aa1.93□□□□□ -2.1
XIST-202ENST00000417942 KRTAP19-5Q3LI72 72 aa1.92□□□□□ -2.1
XIST-202ENST00000417942 KRTAP21-3Q3LHN1 58 aa1.91□□□□□ -2.1
XIST-202ENST00000417942 LPAP08519 4548 aa1.9□□□□□ -2.1
XIST-202ENST00000417942 PRM1P04553 51 aa1.9□□□□□ -2.11
XIST-202ENST00000417942 HMCN1Q96RW7 5635 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms