RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 LCE3AQ5TA76 89 aa6.47□□□□□ -1.37
CHL1-202ENST00000397491 CSMD3Q7Z407 3707 aa6.45□□□□□ -1.38
CHL1-202ENST00000397491 DNAH3Q8TD57 4116 aa6.43□□□□□ -1.38
CHL1-202ENST00000397491 DNHD1Q96M86 4753 aa6.41□□□□□ -1.38
CHL1-202ENST00000397491 HUWE1Q7Z6Z7 4374 aaKnown RBP6.4□□□□□ -1.38
CHL1-202ENST00000397491 CRCT1Q9UGL9 99 aa6.36□□□□□ -1.39
CHL1-202ENST00000397491 ANK2Q01484 3957 aa6.32□□□□□ -1.4
CHL1-202ENST00000397491 DNAH5Q8TE73 4624 aa6.24□□□□□ -1.41
CHL1-202ENST00000397491 PLECQ15149 4684 aaKnown RBP6.2□□□□□ -1.42
CHL1-202ENST00000397491 DNAH9Q9NYC9 4486 aa6.17□□□□□ -1.42
CHL1-202ENST00000397491 DNAH1Q9P2D7 4330 aa6.15□□□□□ -1.43
CHL1-202ENST00000397491 DNAH11Q96DT5 4516 aa6.1□□□□□ -1.43
CHL1-202ENST00000397491 DYNC2H1Q8NCM8 4307 aaKnown RBP6.09□□□□□ -1.43
CHL1-202ENST00000397491 KRTAP10-5P60370 271 aa6.09□□□□□ -1.43
CHL1-202ENST00000397491 ALMS1Q8TCU4 4167 aa6.08□□□□□ -1.44
CHL1-202ENST00000397491 RYR1P21817 5038 aa6.04□□□□□ -1.44
CHL1-202ENST00000397491 DNAH10Q8IVF4 4471 aa6.02□□□□□ -1.45
CHL1-202ENST00000397491 FAT1Q14517 4588 aa6.01□□□□□ -1.45
CHL1-202ENST00000397491 DNAH7Q8WXX0 4024 aa5.99□□□□□ -1.45
CHL1-202ENST00000397491 LYSTQ99698 3801 aa5.99□□□□□ -1.45
CHL1-202ENST00000397491 KRTAP4-1Q9BYQ7 146 aa5.95□□□□□ -1.46
CHL1-202ENST00000397491 PRKDCP78527 4128 aaKnown RBP5.94□□□□□ -1.46
CHL1-202ENST00000397491 DYNC1H1Q14204 4646 aaKnown RBP5.93□□□□□ -1.46
CHL1-202ENST00000397491 DNAH2Q9P225 4427 aa5.91□□□□□ -1.46
CHL1-202ENST00000397491 KIAA1109Q2LD37 5005 aa5.89□□□□□ -1.47
CHL1-202ENST00000397491 DNAH8Q96JB1 4490 aa5.89□□□□□ -1.47
CHL1-202ENST00000397491 LRP1BQ9NZR2 4599 aa5.85□□□□□ -1.47
CHL1-202ENST00000397491 STARD9Q9P2P6 4700 aa5.82□□□□□ -1.48
CHL1-202ENST00000397491 VPS13DQ5THJ4 4388 aa5.81□□□□□ -1.48
CHL1-202ENST00000397491 DNAH17Q9UFH2 4485 aa5.81□□□□□ -1.48
CHL1-202ENST00000397491 FRAS1Q86XX4 4008 aa5.79□□□□□ -1.48
CHL1-202ENST00000397491 SACSQ9NZJ4 4579 aa5.78□□□□□ -1.48
CHL1-202ENST00000397491 SPRR2GQ9BYE4 73 aa5.78□□□□□ -1.48
CHL1-202ENST00000397491 MT1HP80294 61 aa5.77□□□□□ -1.49
CHL1-202ENST00000397491 DNAH6Q9C0G6 4158 aa5.75□□□□□ -1.49
CHL1-202ENST00000397491 KRTAP8-1Q8IUC2 63 aa5.74□□□□□ -1.49
CHL1-202ENST00000397491 MYCBP2O75592 4640 aa5.72□□□□□ -1.49
CHL1-202ENST00000397491 MT2AP02795 61 aa5.71□□□□□ -1.5
CHL1-202ENST00000397491 LCE3CQ5T5A8 94 aa5.71□□□□□ -1.5
CHL1-202ENST00000397491 RYR3Q15413 4870 aa5.7□□□□□ -1.5
CHL1-202ENST00000397491 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
CHL1-202ENST00000397491 HECTD4Q9Y4D8 3996 aa5.66□□□□□ -1.5
CHL1-202ENST00000397491 MT1FP04733 61 aa5.61□□□□□ -1.51
CHL1-202ENST00000397491 VPS13BQ7Z7G8 4022 aa5.6□□□□□ -1.51
CHL1-202ENST00000397491 FAT2Q9NYQ8 4349 aa5.6□□□□□ -1.51
CHL1-202ENST00000397491 KRTAP17-1Q9BYP8 105 aa5.6□□□□□ -1.51
CHL1-202ENST00000397491 PKD1P98161 4303 aa5.59□□□□□ -1.51
CHL1-202ENST00000397491 APOBP04114 4563 aaKnown RBP5.58□□□□□ -1.52
CHL1-202ENST00000397491 FAT3Q8TDW7 4589 aa5.58□□□□□ -1.52
CHL1-202ENST00000397491 SPRR5A0A1B0GTR4 108 aa5.56□□□□□ -1.52
CHL1-202ENST00000397491 KMT2AQ03164 3969 aa5.56□□□□□ -1.52
CHL1-202ENST00000397491 LRP1Q07954 4544 aaKnown RBP5.5□□□□□ -1.53
CHL1-202ENST00000397491 HYDINQ4G0P3 5121 aa5.49□□□□□ -1.53
CHL1-202ENST00000397491 HERC2O95714 4834 aa5.48□□□□□ -1.53
CHL1-202ENST00000397491 KRTAP10-7P60409 375 aaPredicted RBP5.43□□□□□ -1.54
CHL1-202ENST00000397491 PKHD1P08F94 4074 aa5.4□□□□□ -1.55
CHL1-202ENST00000397491 KRTAP19-1Q8IUB9 90 aa5.39□□□□□ -1.55
CHL1-202ENST00000397491 SPRR2FQ96RM1 72 aa5.38□□□□□ -1.55
CHL1-202ENST00000397491 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
CHL1-202ENST00000397491 PKHD1L1Q86WI1 4243 aa5.37□□□□□ -1.55
CHL1-202ENST00000397491 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
CHL1-202ENST00000397491 RYR2Q92736 4967 aa5.36□□□□□ -1.55
CHL1-202ENST00000397491 LRP2P98164 4655 aa5.35□□□□□ -1.55
CHL1-202ENST00000397491 PCLOQ9Y6V0 5065 aa5.32□□□□□ -1.56
CHL1-202ENST00000397491 KRTAP19-8Q3LI54 63 aa5.29□□□□□ -1.56
CHL1-202ENST00000397491 MT1XP80297 61 aa5.28□□□□□ -1.56
CHL1-202ENST00000397491 BIRC6Q9NR09 4857 aa5.24□□□□□ -1.57
CHL1-202ENST00000397491 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
CHL1-202ENST00000397491 MT1GP13640 62 aa5.15□□□□□ -1.58
CHL1-202ENST00000397491 KMT2CQ8NEZ4 4911 aaKnown RBP5.15□□□□□ -1.59
CHL1-202ENST00000397491 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.59
CHL1-202ENST00000397491 MT1BP07438 61 aa5.14□□□□□ -1.59
CHL1-202ENST00000397491 EPPK1P58107 5090 aaKnown RBP5.14□□□□□ -1.59
CHL1-202ENST00000397491 LCE2CQ5TA81 110 aa5.11□□□□□ -1.59
CHL1-202ENST00000397491 HERC1Q15751 4861 aa5.09□□□□□ -1.59
CHL1-202ENST00000397491 KRTAP4-8A0A0G2JLE6 195 aa5.07□□□□□ -1.6
CHL1-202ENST00000397491 KRTAP4-8Q9BYQ9 185 aa5.07□□□□□ -1.6
CHL1-202ENST00000397491 SYNE1Q8NF91 8797 aaKnown RBP5.06□□□□□ -1.6
CHL1-202ENST00000397491 HSPG2P98160 4391 aa5.05□□□□□ -1.6
CHL1-202ENST00000397491 LCE3DQ9BYE3 92 aa5.02□□□□□ -1.61
CHL1-202ENST00000397491 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
CHL1-202ENST00000397491 FSIP2Q5CZC0 6907 aa5□□□□□ -1.61
CHL1-202ENST00000397491 TNXBP22105 4242 aa4.99□□□□□ -1.61
CHL1-202ENST00000397491 SPRR2EP22531 72 aa4.99□□□□□ -1.61
CHL1-202ENST00000397491 SPRR2BP35325 72 aa4.99□□□□□ -1.61
CHL1-202ENST00000397491 SPRR2AP35326 72 aa4.99□□□□□ -1.61
CHL1-202ENST00000397491 ABCA13Q86UQ4 5058 aa4.97□□□□□ -1.61
CHL1-202ENST00000397491 UBR4Q5T4S7 5183 aa4.96□□□□□ -1.61
CHL1-202ENST00000397491 LCE3EQ5T5B0 92 aa4.96□□□□□ -1.61
CHL1-202ENST00000397491 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
CHL1-202ENST00000397491 LPAP08519 4548 aa4.93□□□□□ -1.62
CHL1-202ENST00000397491 KRTAP19-2Q3LHN2 52 aa4.88□□□□□ -1.63
CHL1-202ENST00000397491 LCE2BO14633 110 aa4.84□□□□□ -1.63
CHL1-202ENST00000397491 SPRR2DP22532 72 aa4.81□□□□□ -1.64
CHL1-202ENST00000397491 MT1LQ93083 61 aa4.8□□□□□ -1.64
CHL1-202ENST00000397491 MUC17Q685J3 4493 aa4.76□□□□□ -1.65
CHL1-202ENST00000397491 PRM1P04553 51 aa4.75□□□□□ -1.65
CHL1-202ENST00000397491 MT1EP04732 61 aa4.71□□□□□ -1.66
CHL1-202ENST00000397491 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
CHL1-202ENST00000397491 FAT4Q6V0I7 4981 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms