RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 DCAF8L2P0C7V8 631 aa24.92■■□□□ 1.58
CHL1-202ENST00000397491 SUPT5HO00267 1087 aaKnown RBP24.38■■□□□ 1.49
CHL1-202ENST00000397491 PELP1Q8IZL8 1130 aaKnown RBP24.14■■□□□ 1.46
CHL1-202ENST00000397491 NISCHQ9Y2I1 1504 aa23.9■■□□□ 1.42
CHL1-202ENST00000397491 PCGF6Q9BYE7 350 aa23.74■■□□□ 1.39
CHL1-202ENST00000397491 MYT1Q01538 1121 aa23.68■■□□□ 1.38
CHL1-202ENST00000397491 SHROOM4Q9ULL8 1493 aa23.67■■□□□ 1.38
CHL1-202ENST00000397491 EHMT2Q96KQ7 1210 aa23.62■■□□□ 1.37
CHL1-202ENST00000397491 CENPBP07199 599 aaPredicted RBP23.49■■□□□ 1.35
CHL1-202ENST00000397491 ZEB1P37275 1124 aaPredicted RBP23.26■■□□□ 1.31
CHL1-202ENST00000397491 ERICH6Q7L0X2 663 aa23.24■■□□□ 1.31
CHL1-202ENST00000397491 FAM9AQ8IZU1 332 aaPredicted RBP22.99■■□□□ 1.27
CHL1-202ENST00000397491 CCER1Q8TC90 406 aaPredicted RBP22.99■■□□□ 1.27
CHL1-202ENST00000397491 TTBK1Q5TCY1 1321 aaPredicted RBP22.99■■□□□ 1.27
CHL1-202ENST00000397491 APLP2Q06481 763 aa22.96■■□□□ 1.27
CHL1-202ENST00000397491 HRCP23327 699 aa22.93■■□□□ 1.26
CHL1-202ENST00000397491 YTHDC1Q96MU7 727 aaKnown RBP22.91■■□□□ 1.26
CHL1-202ENST00000397491 NEFLP07196 543 aa22.65■■□□□ 1.22
CHL1-202ENST00000397491 PPARGC1BQ86YN6 1023 aaKnown RBP22.52■■□□□ 1.2
CHL1-202ENST00000397491 TRIM26Q12899 539 aaPredicted RBP22.52■■□□□ 1.19
CHL1-202ENST00000397491 TRIM41Q8WV44 630 aa22.44■■□□□ 1.18
CHL1-202ENST00000397491 RANGAP1P46060 587 aaPredicted RBP22.26■■□□□ 1.15
CHL1-202ENST00000397491 UBTFP17480 764 aaKnown RBP22.08■■□□□ 1.13
CHL1-202ENST00000397491 GTF3C3Q9Y5Q9 886 aa22.03■■□□□ 1.12
CHL1-202ENST00000397491 DIEXFQ68CQ4 756 aaKnown RBP22.02■■□□□ 1.12
CHL1-202ENST00000397491 LOC105371045A0A1W2PR82 267 aa22.02■■□□□ 1.12
CHL1-202ENST00000397491 DAXXQ9UER7 740 aaPredicted RBP21.91■■□□□ 1.1
CHL1-202ENST00000397491 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
CHL1-202ENST00000397491 ATP1B4Q9UN42 357 aaPredicted RBP21.87■■□□□ 1.09
CHL1-202ENST00000397491 RTL5Q5HYW3 569 aaPredicted RBP21.84■■□□□ 1.09
CHL1-202ENST00000397491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.83■■□□□ 1.08
CHL1-202ENST00000397491 ACIN1Q9UKV3 1341 aaKnown RBP21.7■■□□□ 1.06
CHL1-202ENST00000397491 HNRNPUL2Q1KMD3 747 aaKnown RBP21.69■■□□□ 1.06
CHL1-202ENST00000397491 BCANQ96GW7 911 aa21.65■■□□□ 1.06
CHL1-202ENST00000397491 ITGAEP38570 1179 aa21.58■■□□□ 1.04
CHL1-202ENST00000397491 ZNF316A6NFI3 1004 aaPredicted RBP21.47■■□□□ 1.03
CHL1-202ENST00000397491 POLR3GLQ9BT43 218 aa21.47■■□□□ 1.03
CHL1-202ENST00000397491 CNGB1Q14028 1251 aaPredicted RBP21.43■■□□□ 1.02
CHL1-202ENST00000397491 CDK11AQ9UQ88 783 aaPredicted RBP21.39■■□□□ 1.01
CHL1-202ENST00000397491 SCAF1Q9H7N4 1312 aaKnown RBP21.31■■□□□ 1
CHL1-202ENST00000397491 CLSPNQ9HAW4 1339 aa21.26■□□□□ 0.99
CHL1-202ENST00000397491 NEUROD1Q13562 356 aa21.21■□□□□ 0.99
CHL1-202ENST00000397491 EIF5BO60841 1220 aaKnown RBP21.16■□□□□ 0.98
CHL1-202ENST00000397491 ANP32CO43423 234 aa21.11■□□□□ 0.97
CHL1-202ENST00000397491 ANP32AP39687 249 aaKnown RBP21.04■□□□□ 0.96
CHL1-202ENST00000397491 FKBP8Q14318 412 aa21.01■□□□□ 0.95
CHL1-202ENST00000397491 MYT1LQ9UL68 1186 aa20.94■□□□□ 0.94
CHL1-202ENST00000397491 NPM2Q86SE8 214 aaKnown RBP20.88■□□□□ 0.93
CHL1-202ENST00000397491 FAM50AQ14320 339 aaKnown RBP20.88■□□□□ 0.93
CHL1-202ENST00000397491 ABCC9O60706 1549 aa20.88■□□□□ 0.93
CHL1-202ENST00000397491 PABPN1Q86U42 306 aaKnown RBP eCLIP20.84■□□□□ 0.93
CHL1-202ENST00000397491 GLIPR1L2Q4G1C9 344 aa20.83■□□□□ 0.93
CHL1-202ENST00000397491 NBR1Q14596 966 aa20.81■□□□□ 0.92
CHL1-202ENST00000397491 ANP32EQ9BTT0 268 aa20.77■□□□□ 0.92
CHL1-202ENST00000397491 DCAF1Q9Y4B6 1507 aa20.75■□□□□ 0.91
CHL1-202ENST00000397491 TRIM52Q96A61 297 aa20.73■□□□□ 0.91
CHL1-202ENST00000397491 SLC4A1APQ9BWU0 796 aaKnown RBP20.71■□□□□ 0.91
CHL1-202ENST00000397491 MIER1Q8N108 512 aa20.66■□□□□ 0.9
CHL1-202ENST00000397491 ZBTB47Q9UFB7 747 aaPredicted RBP20.64■□□□□ 0.89
CHL1-202ENST00000397491 HNRNPUQ00839 825 aaKnown RBP eCLIP20.61■□□□□ 0.89
CHL1-202ENST00000397491 ZNF326Q5BKZ1 582 aaKnown RBP20.6■□□□□ 0.89
CHL1-202ENST00000397491 BCL11AQ9H165 835 aa20.56■□□□□ 0.88
CHL1-202ENST00000397491 DDX10Q13206 875 aaKnown RBP20.54■□□□□ 0.88
CHL1-202ENST00000397491 CANXP27824 592 aaKnown RBP20.54■□□□□ 0.88
CHL1-202ENST00000397491 ANP32BQ92688 251 aaKnown RBP20.5■□□□□ 0.87
CHL1-202ENST00000397491 CCDC136Q96JN2 1154 aa20.47■□□□□ 0.87
CHL1-202ENST00000397491 IRX6P78412 446 aaPredicted RBP20.44■□□□□ 0.86
CHL1-202ENST00000397491 FAM9BQ8IZU0 186 aa20.43■□□□□ 0.86
CHL1-202ENST00000397491 ARXQ96QS3 562 aa20.41■□□□□ 0.86
CHL1-202ENST00000397491 HSP90AA1P07900 732 aaKnown RBP20.32■□□□□ 0.84
CHL1-202ENST00000397491 UPF2Q9HAU5 1272 aaKnown RBP20.32■□□□□ 0.84
CHL1-202ENST00000397491 CSRNP3Q8WYN3 585 aa20.31■□□□□ 0.84
CHL1-202ENST00000397491 RTN4Q9NQC3 1192 aaKnown RBP20.3■□□□□ 0.84
CHL1-202ENST00000397491 TONSLQ96HA7 1378 aa20.27■□□□□ 0.83
CHL1-202ENST00000397491 SUPT16HQ9Y5B9 1047 aaKnown RBP20.25■□□□□ 0.83
CHL1-202ENST00000397491 SALL2Q9Y467 1007 aaPredicted RBP20.23■□□□□ 0.83
CHL1-202ENST00000397491 MYO15BQ96JP2 1530 aa20.21■□□□□ 0.83
CHL1-202ENST00000397491 NEFMP07197 916 aa20.19■□□□□ 0.82
CHL1-202ENST00000397491 FBLN2P98095 1184 aa20.18■□□□□ 0.82
CHL1-202ENST00000397491 MRS2Q9HD23 443 aa20.18■□□□□ 0.82
CHL1-202ENST00000397491 HIRIP3Q9BW71 556 aaPredicted RBP20.12■□□□□ 0.81
CHL1-202ENST00000397491 DDRGK1Q96HY6 314 aa20.12■□□□□ 0.81
CHL1-202ENST00000397491 TMC1Q8TDI8 760 aa20.11■□□□□ 0.81
CHL1-202ENST00000397491 DEKP35659 375 aaKnown RBP20.11■□□□□ 0.81
CHL1-202ENST00000397491 ERICH6BQ5W0A0 696 aa20.1■□□□□ 0.81
CHL1-202ENST00000397491 NOP58Q9Y2X3 529 aaKnown RBP20.1■□□□□ 0.81
CHL1-202ENST00000397491 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
CHL1-202ENST00000397491 P3H3Q8IVL6 736 aa20.08■□□□□ 0.81
CHL1-202ENST00000397491 TRIM44Q96DX7 344 aaPredicted RBP20.07■□□□□ 0.8
CHL1-202ENST00000397491 PPM1GO15355 546 aaPredicted RBP20.06■□□□□ 0.8
CHL1-202ENST00000397491 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.06■□□□□ 0.8
CHL1-202ENST00000397491 LAS1LQ9Y4W2 734 aaKnown RBP20.05■□□□□ 0.8
CHL1-202ENST00000397491 RBM19Q9Y4C8 960 aaKnown RBP20.03■□□□□ 0.8
CHL1-202ENST00000397491 NAP1L5Q96NT1 182 aaPredicted RBP20.02■□□□□ 0.8
CHL1-202ENST00000397491 BECN1Q14457 450 aa19.98■□□□□ 0.79
CHL1-202ENST00000397491 PPP4R2Q9NY27 417 aa19.96■□□□□ 0.79
CHL1-202ENST00000397491 TNNT2P45379 298 aaPredicted RBP19.96■□□□□ 0.79
CHL1-202ENST00000397491 SLC24A1O60721 1099 aa19.95■□□□□ 0.78
CHL1-202ENST00000397491 ARID3CA6NKF2 412 aa19.93■□□□□ 0.78
CHL1-202ENST00000397491 TSHZ2Q9NRE2 1034 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms