RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 RETNLBQ9BQ08 111 aa2.13□□□□□ -2.07
SMC6-202ENST00000381272 KRTAP4-3Q9BYR4 195 aa2.13□□□□□ -2.07
SMC6-202ENST00000381272 HRES1P13985 223 aa2.12□□□□□ -2.07
SMC6-202ENST00000381272 SPAG11AQ6PDA7 123 aa2.12□□□□□ -2.07
SMC6-202ENST00000381272 LIMD2Q9BT23 127 aa2.12□□□□□ -2.07
SMC6-202ENST00000381272 KRTAP10-1P60331 282 aa2.12□□□□□ -2.07
SMC6-202ENST00000381272 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
SMC6-202ENST00000381272 KRTAP13-2Q52LG2 175 aa2.11□□□□□ -2.07
SMC6-202ENST00000381272 SSBP3-AS1Q7Z2R9 100 aa2.11□□□□□ -2.07
SMC6-202ENST00000381272 FAT2Q9NYQ8 4349 aa2.11□□□□□ -2.07
SMC6-202ENST00000381272 LOC101927531A0A1B0GV80 90 aa2.1□□□□□ -2.07
SMC6-202ENST00000381272 LINC00313P59037 77 aa2.1□□□□□ -2.07
SMC6-202ENST00000381272 KRTAP13-3Q3SY46 172 aa2.1□□□□□ -2.07
SMC6-202ENST00000381272 TYMSOSQ8TAI1 123 aa2.1□□□□□ -2.07
SMC6-202ENST00000381272 A6NED7 52 aa2.1□□□□□ -2.07
SMC6-202ENST00000381272 C8orf87E5RJ46 101 aa2.1□□□□□ -2.07
SMC6-202ENST00000381272 LCA10Q71F78 164 aa2.1□□□□□ -2.07
SMC6-202ENST00000381272 LINC01558Q9Y6Z2 57 aa2.1□□□□□ -2.07
SMC6-202ENST00000381272 SPTSSBQ8NFR3 76 aa2.09□□□□□ -2.08
SMC6-202ENST00000381272 SPINK7P58062 85 aa2.08□□□□□ -2.08
SMC6-202ENST00000381272 PMAIP1Q13794 54 aa2.08□□□□□ -2.08
SMC6-202ENST00000381272 VPS13BQ7Z7G8 4022 aa2.08□□□□□ -2.08
SMC6-202ENST00000381272 ACYP2P14621 99 aa2.07□□□□□ -2.08
SMC6-202ENST00000381272 Q6ZSA8 131 aa2.07□□□□□ -2.08
SMC6-202ENST00000381272 SACSQ9NZJ4 4579 aa2.07□□□□□ -2.08
SMC6-202ENST00000381272 DYNC1H1Q14204 4646 aaKnown RBP2.06□□□□□ -2.08
SMC6-202ENST00000381272 LCE3AQ5TA76 89 aa2.06□□□□□ -2.08
SMC6-202ENST00000381272 ATP11AUNQ6ZP68 121 aa2.05□□□□□ -2.08
SMC6-202ENST00000381272 DMAC1Q96GE9 116 aa2.05□□□□□ -2.08
SMC6-202ENST00000381272 CDC42SE1Q9NRR8 79 aa2.05□□□□□ -2.08
SMC6-202ENST00000381272 SMR3BP02814 79 aaPredicted RBP2.04□□□□□ -2.08
SMC6-202ENST00000381272 A6NN06 94 aa2.03□□□□□ -2.08
SMC6-202ENST00000381272 C7orf65Q6ZTY9 151 aa2.03□□□□□ -2.08
SMC6-202ENST00000381272 PKHD1P08F94 4074 aa2.03□□□□□ -2.08
SMC6-202ENST00000381272 FAT1Q14517 4588 aa2.03□□□□□ -2.08
SMC6-202ENST00000381272 A0A1B0GU69 56 aa2.03□□□□□ -2.09
SMC6-202ENST00000381272 SPINK1P00995 79 aa2.03□□□□□ -2.09
SMC6-202ENST00000381272 APOBP04114 4563 aaKnown RBP2.02□□□□□ -2.09
SMC6-202ENST00000381272 C9orf92A6NGG3 77 aa2.02□□□□□ -2.09
SMC6-202ENST00000381272 KTN1-AS1Q86SY8 53 aa2.02□□□□□ -2.09
SMC6-202ENST00000381272 LINC00304Q8N9R0 145 aa2.02□□□□□ -2.09
SMC6-202ENST00000381272 PKHD1L1Q86WI1 4243 aa1.99□□□□□ -2.09
SMC6-202ENST00000381272 KRTAP10-8P60410 259 aa1.99□□□□□ -2.09
SMC6-202ENST00000381272 MIR22HGQ0VDD5 57 aa1.98□□□□□ -2.09
SMC6-202ENST00000381272 SPATA8Q6RVD6 105 aa1.98□□□□□ -2.09
SMC6-202ENST00000381272 RBM12B-AS1Q9P1G2 102 aa1.98□□□□□ -2.09
SMC6-202ENST00000381272 FAT3Q8TDW7 4589 aa1.98□□□□□ -2.09
SMC6-202ENST00000381272 RYR2Q92736 4967 aa1.98□□□□□ -2.09
SMC6-202ENST00000381272 UQCR11O14957 56 aa1.98□□□□□ -2.09
SMC6-202ENST00000381272 KRTAP10-4P60372 401 aaPredicted RBP1.98□□□□□ -2.09
SMC6-202ENST00000381272 RPS29P62273 56 aaKnown RBP1.98□□□□□ -2.09
SMC6-202ENST00000381272 A8MUU9 505 aa1.97□□□□□ -2.09
SMC6-202ENST00000381272 ADM2Q7Z4H4 148 aa1.97□□□□□ -2.09
SMC6-202ENST00000381272 C20orf166-AS1Q96NR2 134 aa1.96□□□□□ -2.1
SMC6-202ENST00000381272 LRP1Q07954 4544 aaKnown RBP1.95□□□□□ -2.1
SMC6-202ENST00000381272 KMT2CQ8NEZ4 4911 aaKnown RBP1.94□□□□□ -2.1
SMC6-202ENST00000381272 HSPG2P98160 4391 aa1.94□□□□□ -2.1
SMC6-202ENST00000381272 KRTAP21-3Q3LHN1 58 aa1.94□□□□□ -2.1
SMC6-202ENST00000381272 TNXBP22105 4242 aa1.93□□□□□ -2.1
SMC6-202ENST00000381272 H0YAA0 97 aa1.92□□□□□ -2.1
SMC6-202ENST00000381272 A0A1B0GU33 70 aa1.91□□□□□ -2.1
SMC6-202ENST00000381272 H1FX-AS1Q4G0G2 97 aa1.91□□□□□ -2.1
SMC6-202ENST00000381272 COX6B2Q6YFQ2 88 aa1.91□□□□□ -2.1
SMC6-202ENST00000381272 FLG2Q5D862 2391 aaPredicted RBP1.91□□□□□ -2.1
SMC6-202ENST00000381272 CSAG1Q6PB30 78 aa1.91□□□□□ -2.1
SMC6-202ENST00000381272 RYR3Q15413 4870 aa1.9□□□□□ -2.1
SMC6-202ENST00000381272 RYR1P21817 5038 aa1.9□□□□□ -2.11
SMC6-202ENST00000381272 Q5VSD8 79 aa1.9□□□□□ -2.11
SMC6-202ENST00000381272 MYCBP2O75592 4640 aa1.89□□□□□ -2.11
SMC6-202ENST00000381272 KRTAP5-5Q701N2 237 aaPredicted RBP1.88□□□□□ -2.11
SMC6-202ENST00000381272 RPL37P61927 97 aaKnown RBP1.87□□□□□ -2.11
SMC6-202ENST00000381272 LINC01554Q52M75 96 aa1.87□□□□□ -2.11
SMC6-202ENST00000381272 CAMK2N1Q7Z7J9 78 aa1.87□□□□□ -2.11
SMC6-202ENST00000381272 LUZP6Q538Z0 58 aa1.87□□□□□ -2.11
SMC6-202ENST00000381272 KIAA1109Q2LD37 5005 aa1.86□□□□□ -2.11
SMC6-202ENST00000381272 CRIPTQ9P021 101 aa1.86□□□□□ -2.11
SMC6-202ENST00000381272 A0A0D9SG42 100 aa1.85□□□□□ -2.11
SMC6-202ENST00000381272 KRTAP13-4Q3LI77 160 aa1.85□□□□□ -2.11
SMC6-202ENST00000381272 S4R3F8 94 aa1.85□□□□□ -2.11
SMC6-202ENST00000381272 LPAP08519 4548 aa1.85□□□□□ -2.11
SMC6-202ENST00000381272 DMBT1Q9UGM3 2413 aaPredicted RBP1.85□□□□□ -2.11
SMC6-202ENST00000381272 LRP2P98164 4655 aa1.84□□□□□ -2.11
SMC6-202ENST00000381272 K7ERS5 55 aa1.84□□□□□ -2.12
SMC6-202ENST00000381272 MT1HL1P0DM35 61 aa1.84□□□□□ -2.12
SMC6-202ENST00000381272 GPR98Q8WXG9 6306 aa1.84□□□□□ -2.12
SMC6-202ENST00000381272 P0C880 135 aa1.83□□□□□ -2.12
SMC6-202ENST00000381272 KRTAP25-1Q3LHN0 102 aa1.83□□□□□ -2.12
SMC6-202ENST00000381272 EPPK1P58107 5090 aaKnown RBP1.83□□□□□ -2.12
SMC6-202ENST00000381272 ROMO1P60602 79 aa1.81□□□□□ -2.12
SMC6-202ENST00000381272 ABCA13Q86UQ4 5058 aa1.81□□□□□ -2.12
SMC6-202ENST00000381272 MUC17Q685J3 4493 aa1.79□□□□□ -2.12
SMC6-202ENST00000381272 LCE1CQ5T751 118 aa1.79□□□□□ -2.12
SMC6-202ENST00000381272 LCE1BQ5T7P3 118 aa1.79□□□□□ -2.12
SMC6-202ENST00000381272 TPRXLQ17RH7 258 aa1.78□□□□□ -2.12
SMC6-202ENST00000381272 SPINT4Q6UDR6 99 aa1.78□□□□□ -2.12
SMC6-202ENST00000381272 C10orf95Q9H7T3 257 aa1.77□□□□□ -2.13
SMC6-202ENST00000381272 KRTAP12-1P59990 96 aa1.77□□□□□ -2.13
SMC6-202ENST00000381272 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
SMC6-202ENST00000381272 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
SMC6-202ENST00000381272 M0QZ58 72 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms