RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 AEBP2Q6ZN18 517 aaPredicted RBP16.77■□□□□ 0.28
SMC6-202ENST00000381272 CHIC1Q5VXU3 224 aa16.26■□□□□ 0.19
SMC6-202ENST00000381272 SENP3Q9H4L4 574 aaPredicted RBP14.3□□□□□ -0.12
SMC6-202ENST00000381272 PHF23Q9BUL5 403 aaPredicted RBP14.26□□□□□ -0.13
SMC6-202ENST00000381272 FOXD1Q16676 465 aa13.26□□□□□ -0.29
SMC6-202ENST00000381272 PLPPR3Q6T4P5 718 aa13.16□□□□□ -0.3
SMC6-202ENST00000381272 PPP6R1Q9UPN7 881 aa12.64□□□□□ -0.39
SMC6-202ENST00000381272 ADRA2BP18089 450 aa12.62□□□□□ -0.39
SMC6-202ENST00000381272 PIAS4Q8N2W9 510 aaPredicted RBP12.49□□□□□ -0.41
SMC6-202ENST00000381272 MSH5O43196 834 aa12.32□□□□□ -0.44
SMC6-202ENST00000381272 POTEDQ86YR6 584 aa12.16□□□□□ -0.46
SMC6-202ENST00000381272 SCAF1Q9H7N4 1312 aaKnown RBP11.6□□□□□ -0.55
SMC6-202ENST00000381272 PPP4R3CPQ6ZMV5 832 aa11.56□□□□□ -0.56
SMC6-202ENST00000381272 MAPK8IP2Q13387 824 aaPredicted RBP11.49□□□□□ -0.57
SMC6-202ENST00000381272 DMRT2Q9Y5R5 561 aa11.37□□□□□ -0.59
SMC6-202ENST00000381272 CNKSR2Q8WXI2 1034 aa11.28□□□□□ -0.6
SMC6-202ENST00000381272 NCBP3Q53F19 620 aaKnown RBP11.24□□□□□ -0.61
SMC6-202ENST00000381272 KCNA4P22459 653 aa11.11□□□□□ -0.63
SMC6-202ENST00000381272 RNF216Q9NWF9 866 aaPredicted RBP11.1□□□□□ -0.63
SMC6-202ENST00000381272 HOXD11P31277 338 aaPredicted RBP11.08□□□□□ -0.64
SMC6-202ENST00000381272 NPM3O75607 178 aaKnown RBP11.04□□□□□ -0.64
SMC6-202ENST00000381272 DCAF8L1A6NGE4 600 aa10.91□□□□□ -0.66
SMC6-202ENST00000381272 DNAJC5BQ9UF47 199 aa10.76□□□□□ -0.69
SMC6-202ENST00000381272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.58□□□□□ -0.728e-7■■□□□ 12.1
SMC6-202ENST00000381272 SLC4A1APQ9BWU0 796 aaKnown RBP10.57□□□□□ -0.72
SMC6-202ENST00000381272 RNF39Q9H2S5 420 aa10.53□□□□□ -0.72
SMC6-202ENST00000381272 SLC4A2P04920 1241 aa10.45□□□□□ -0.74
SMC6-202ENST00000381272 CACNB1Q02641 598 aaPredicted RBP10.43□□□□□ -0.74
SMC6-202ENST00000381272 C1QBPQ07021 282 aaKnown RBP10.41□□□□□ -0.74
SMC6-202ENST00000381272 U3KPZ7 1027 aaPredicted RBP10.37□□□□□ -0.75
SMC6-202ENST00000381272 FOXD4L1Q9NU39 408 aa10.28□□□□□ -0.76
SMC6-202ENST00000381272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.23□□□□□ -0.77
SMC6-202ENST00000381272 HNRNPUL2Q1KMD3 747 aaKnown RBP10.23□□□□□ -0.77
SMC6-202ENST00000381272 MYCNP04198 464 aaPredicted RBP10.22□□□□□ -0.77
SMC6-202ENST00000381272 ZBTB22O15209 634 aa10.2□□□□□ -0.78
SMC6-202ENST00000381272 SAMD1Q6SPF0 538 aaPredicted RBP10.18□□□□□ -0.78
SMC6-202ENST00000381272 APLP2Q06481 763 aa10.17□□□□□ -0.78
SMC6-202ENST00000381272 SPINK5Q9NQ38 1064 aaPredicted RBP10.12□□□□□ -0.79
SMC6-202ENST00000381272 CAPN15O75808 1086 aa10.11□□□□□ -0.79
SMC6-202ENST00000381272 EHMT2Q96KQ7 1210 aa10.1□□□□□ -0.79
SMC6-202ENST00000381272 CSRNP3Q8WYN3 585 aa10.04□□□□□ -0.8
SMC6-202ENST00000381272 ZNF219Q9P2Y4 722 aaPredicted RBP10.03□□□□□ -0.8
SMC6-202ENST00000381272 TRHP20396 242 aaPredicted RBP10.03□□□□□ -0.8
SMC6-202ENST00000381272 DSG3P32926 999 aa9.96□□□□□ -0.81
SMC6-202ENST00000381272 ATXN8OSP0DMR3 200 aa9.96□□□□□ -0.82
SMC6-202ENST00000381272 ATF5Q9Y2D1 282 aaPredicted RBP9.93□□□□□ -0.82
SMC6-202ENST00000381272 ABCB7O75027 752 aa9.89□□□□□ -0.83
SMC6-202ENST00000381272 POLA2Q14181 598 aa9.83□□□□□ -0.84
SMC6-202ENST00000381272 ZBTB12Q9Y330 459 aaPredicted RBP9.68□□□□□ -0.86
SMC6-202ENST00000381272 FBLN2P98095 1184 aa9.57□□□□□ -0.88
SMC6-202ENST00000381272 RBM42Q9BTD8 480 aaKnown RBP9.53□□□□□ -0.88
SMC6-202ENST00000381272 MKRN4PQ13434 485 aaPredicted RBP9.49□□□□□ -0.89
SMC6-202ENST00000381272 OSCARQ8IYS5 282 aa9.49□□□□□ -0.89
SMC6-202ENST00000381272 POTEHQ6S545 545 aa9.48□□□□□ -0.89
SMC6-202ENST00000381272 SPDYE2BA6NHP3 402 aa9.39□□□□□ -0.91
SMC6-202ENST00000381272 SPDYE6P0CI01 402 aa9.39□□□□□ -0.91
SMC6-202ENST00000381272 SPDYE2Q495Y8 402 aa9.39□□□□□ -0.91
SMC6-202ENST00000381272 AKT1S1Q96B36 256 aa9.36□□□□□ -0.91
SMC6-202ENST00000381272 ZNF692Q9BU19 519 aaPredicted RBP9.33□□□□□ -0.92
SMC6-202ENST00000381272 SSUH2Q9Y2M2 353 aa9.28□□□□□ -0.92
SMC6-202ENST00000381272 REM2Q8IYK8 340 aaPredicted RBP9.26□□□□□ -0.93
SMC6-202ENST00000381272 SPDYE4A6NLX3 237 aa9.24□□□□□ -0.93
SMC6-202ENST00000381272 PABPN1Q86U42 306 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMC6-202ENST00000381272 CHRDL2Q6WN34 429 aa9.17□□□□□ -0.94
SMC6-202ENST00000381272 PITPNM1O00562 1244 aa9.15□□□□□ -0.94
SMC6-202ENST00000381272 SPDYE1Q8NFV5 336 aaPredicted RBP9.15□□□□□ -0.94
SMC6-202ENST00000381272 CLEC11AQ9Y240 323 aa9.12□□□□□ -0.95
SMC6-202ENST00000381272 FKBP8Q14318 412 aa9.1□□□□□ -0.95
SMC6-202ENST00000381272 PROM2Q8N271 834 aa9.05□□□□□ -0.96
SMC6-202ENST00000381272 STAG3Q9UJ98 1225 aa9.03□□□□□ -0.96
SMC6-202ENST00000381272 PRR29P0C7W0 189 aa9.02□□□□□ -0.97
SMC6-202ENST00000381272 FXR2P51116 673 aaKnown RBP eCLIP9.01□□□□□ -0.97
SMC6-202ENST00000381272 PIP4P2Q8N4L2 257 aa9.01□□□□□ -0.97
SMC6-202ENST00000381272 PRKAR2AP13861 404 aaKnown RBP8.93□□□□□ -0.98
SMC6-202ENST00000381272 CHADLQ6NUI6 762 aa8.89□□□□□ -0.99
SMC6-202ENST00000381272 FBXO3Q9UK99 471 aa8.84□□□□□ -0.99
SMC6-202ENST00000381272 CREBZFQ9NS37 354 aa8.84□□□□□ -0.99
SMC6-202ENST00000381272 FARP1Q9Y4F1 1045 aaPredicted RBP8.8□□□□□ -1
SMC6-202ENST00000381272 HAX1O00165 279 aa8.79□□□□□ -1
SMC6-202ENST00000381272 MIER1Q8N108 512 aa8.79□□□□□ -1
SMC6-202ENST00000381272 PLEKHG5O94827 1062 aa8.78□□□□□ -1
SMC6-202ENST00000381272 PLCD3Q8N3E9 789 aa8.76□□□□□ -1.01
SMC6-202ENST00000381272 NPM1P06748 294 aaKnown RBP eCLIP8.73□□□□□ -1.01
SMC6-202ENST00000381272 SP7Q8TDD2 431 aaPredicted RBP8.73□□□□□ -1.01
SMC6-202ENST00000381272 MNX1P50219 401 aaPredicted RBP8.72□□□□□ -1.01
SMC6-202ENST00000381272 C19orf67A6NJJ6 358 aa8.71□□□□□ -1.01
SMC6-202ENST00000381272 VASPP50552 380 aaPredicted RBP8.7□□□□□ -1.02
SMC6-202ENST00000381272 ZBTB47Q9UFB7 747 aaPredicted RBP8.69□□□□□ -1.02
SMC6-202ENST00000381272 CD44P16070 742 aaKnown RBP8.67□□□□□ -1.02
SMC6-202ENST00000381272 EVX2Q03828 476 aa8.66□□□□□ -1.02
SMC6-202ENST00000381272 PAK3O75914 559 aaPredicted RBP8.62□□□□□ -1.03
SMC6-202ENST00000381272 KLHL34Q8N239 644 aa8.61□□□□□ -1.03
SMC6-202ENST00000381272 ZRANB1Q9UGI0 708 aa8.6□□□□□ -1.03
SMC6-202ENST00000381272 IFNLR1Q8IU57 520 aaPredicted RBP8.57□□□□□ -1.04
SMC6-202ENST00000381272 TSPYL2Q9H2G4 693 aaPredicted RBP8.56□□□□□ -1.04
SMC6-202ENST00000381272 NUBP1P53384 320 aa8.55□□□□□ -1.04
SMC6-202ENST00000381272 RASEFQ8IZ41 740 aa8.55□□□□□ -1.04
SMC6-202ENST00000381272 ZNF579Q8NAF0 562 aaKnown RBP8.55□□□□□ -1.04
SMC6-202ENST00000381272 CLCN6P51797 869 aa8.53□□□□□ -1.04
SMC6-202ENST00000381272 FAM212AQ96EL1 285 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms