RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 DNAH11Q96DT5 4516 aa6.96□□□□□ -1.3
SRPK1-204ENST00000373825 FRAS1Q86XX4 4008 aa6.94□□□□□ -1.3
SRPK1-204ENST00000373825 LORP23490 312 aaPredicted RBP6.89□□□□□ -1.31
SRPK1-204ENST00000373825 DNAH17Q9UFH2 4485 aa6.87□□□□□ -1.31
SRPK1-204ENST00000373825 STARD9Q9P2P6 4700 aa6.83□□□□□ -1.32
SRPK1-204ENST00000373825 LRP1BQ9NZR2 4599 aa6.82□□□□□ -1.32
SRPK1-204ENST00000373825 VPS13DQ5THJ4 4388 aa6.81□□□□□ -1.32
SRPK1-204ENST00000373825 KRTAP10-10P60014 251 aa6.79□□□□□ -1.32
SRPK1-204ENST00000373825 DNAH3Q8TD57 4116 aa6.78□□□□□ -1.32
SRPK1-204ENST00000373825 DNAH7Q8WXX0 4024 aa6.77□□□□□ -1.33
SRPK1-204ENST00000373825 KMT2AQ03164 3969 aa6.77□□□□□ -1.33
SRPK1-204ENST00000373825 DNAH2Q9P225 4427 aa6.75□□□□□ -1.33
SRPK1-204ENST00000373825 CMYA5Q8N3K9 4069 aa6.75□□□□□ -1.33
SRPK1-204ENST00000373825 KRTAP10-4P60372 401 aaPredicted RBP6.68□□□□□ -1.34
SRPK1-204ENST00000373825 DNAH5Q8TE73 4624 aa6.67□□□□□ -1.34
SRPK1-204ENST00000373825 HECTD4Q9Y4D8 3996 aa6.65□□□□□ -1.34
SRPK1-204ENST00000373825 DNAH6Q9C0G6 4158 aa6.62□□□□□ -1.35
SRPK1-204ENST00000373825 FAT1Q14517 4588 aa6.6□□□□□ -1.35
SRPK1-204ENST00000373825 VPS13BQ7Z7G8 4022 aa6.6□□□□□ -1.35
SRPK1-204ENST00000373825 MYCBP2O75592 4640 aa6.58□□□□□ -1.36
SRPK1-204ENST00000373825 LCE3AQ5TA76 89 aa6.58□□□□□ -1.36
SRPK1-204ENST00000373825 PRKDCP78527 4128 aaKnown RBP6.56□□□□□ -1.36
SRPK1-204ENST00000373825 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
SRPK1-204ENST00000373825 DYNC2H1Q8NCM8 4307 aaKnown RBP6.47□□□□□ -1.37
SRPK1-204ENST00000373825 APOBP04114 4563 aaKnown RBP6.46□□□□□ -1.38
SRPK1-204ENST00000373825 MT1HL1P0DM35 61 aa6.45□□□□□ -1.38
SRPK1-204ENST00000373825 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
SRPK1-204ENST00000373825 SACSQ9NZJ4 4579 aa6.42□□□□□ -1.38
SRPK1-204ENST00000373825 DYNC1H1Q14204 4646 aaKnown RBP6.42□□□□□ -1.38
SRPK1-204ENST00000373825 KRTAP10-12P60413 245 aa6.36□□□□□ -1.39
SRPK1-204ENST00000373825 DNHD1Q96M86 4753 aa6.35□□□□□ -1.39
SRPK1-204ENST00000373825 KRTAP21-3Q3LHN1 58 aa6.28□□□□□ -1.4
SRPK1-204ENST00000373825 LRP1Q07954 4544 aaKnown RBP6.24□□□□□ -1.41
SRPK1-204ENST00000373825 HYDINQ4G0P3 5121 aa6.23□□□□□ -1.41
SRPK1-204ENST00000373825 FAT2Q9NYQ8 4349 aa6.2□□□□□ -1.42
SRPK1-204ENST00000373825 FAT3Q8TDW7 4589 aa6.18□□□□□ -1.42
SRPK1-204ENST00000373825 PKHD1P08F94 4074 aa6.18□□□□□ -1.42
SRPK1-204ENST00000373825 CRCT1Q9UGL9 99 aa6.13□□□□□ -1.43
SRPK1-204ENST00000373825 SPRR5A0A1B0GTR4 108 aa6.13□□□□□ -1.43
SRPK1-204ENST00000373825 KRTAP4-1Q9BYQ7 146 aa6.11□□□□□ -1.43
SRPK1-204ENST00000373825 PKD1P98161 4303 aa6.07□□□□□ -1.44
SRPK1-204ENST00000373825 KRTAP4-5Q9BYR2 181 aa6.06□□□□□ -1.44
SRPK1-204ENST00000373825 LRP2P98164 4655 aa6.02□□□□□ -1.44
SRPK1-204ENST00000373825 RYR1P21817 5038 aa6.02□□□□□ -1.45
SRPK1-204ENST00000373825 HSPG2P98160 4391 aa6.01□□□□□ -1.45
SRPK1-204ENST00000373825 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
SRPK1-204ENST00000373825 KIAA1109Q2LD37 5005 aa5.94□□□□□ -1.46
SRPK1-204ENST00000373825 KRTAP8-1Q8IUC2 63 aa5.93□□□□□ -1.46
SRPK1-204ENST00000373825 KRTAP17-1Q9BYP8 105 aa5.91□□□□□ -1.46
SRPK1-204ENST00000373825 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
SRPK1-204ENST00000373825 PKHD1L1Q86WI1 4243 aa5.85□□□□□ -1.47
SRPK1-204ENST00000373825 RYR3Q15413 4870 aa5.78□□□□□ -1.48
SRPK1-204ENST00000373825 SPRR2GQ9BYE4 73 aa5.78□□□□□ -1.48
SRPK1-204ENST00000373825 LPAP08519 4548 aa5.77□□□□□ -1.49
SRPK1-204ENST00000373825 LCE3CQ5T5A8 94 aa5.75□□□□□ -1.49
SRPK1-204ENST00000373825 KRTAP19-5Q3LI72 72 aa5.72□□□□□ -1.49
SRPK1-204ENST00000373825 TNXBP22105 4242 aa5.72□□□□□ -1.49
SRPK1-204ENST00000373825 RYR2Q92736 4967 aa5.69□□□□□ -1.5
SRPK1-204ENST00000373825 KRTAP19-1Q8IUB9 90 aa5.65□□□□□ -1.51
SRPK1-204ENST00000373825 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
SRPK1-204ENST00000373825 MT2AP02795 61 aa5.6□□□□□ -1.51
SRPK1-204ENST00000373825 MT1FP04733 61 aa5.6□□□□□ -1.51
SRPK1-204ENST00000373825 SYNE1Q8NF91 8797 aaKnown RBP5.59□□□□□ -1.51
SRPK1-204ENST00000373825 KRTAP12-4P60329 112 aa5.57□□□□□ -1.52
SRPK1-204ENST00000373825 MT1HP80294 61 aa5.47□□□□□ -1.53
SRPK1-204ENST00000373825 MT1XP80297 61 aa5.44□□□□□ -1.54
SRPK1-204ENST00000373825 KRTAP19-2Q3LHN2 52 aa5.44□□□□□ -1.54
SRPK1-204ENST00000373825 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.54
SRPK1-204ENST00000373825 ABCA13Q86UQ4 5058 aa5.38□□□□□ -1.55
SRPK1-204ENST00000373825 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
SRPK1-204ENST00000373825 KRTAP4-7Q9BYR0 210 aa5.33□□□□□ -1.56
SRPK1-204ENST00000373825 EPPK1P58107 5090 aaKnown RBP5.33□□□□□ -1.56
SRPK1-204ENST00000373825 HERC2O95714 4834 aa5.32□□□□□ -1.56
SRPK1-204ENST00000373825 MUC2Q02817 5179 aa5.31□□□□□ -1.56
SRPK1-204ENST00000373825 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
SRPK1-204ENST00000373825 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
SRPK1-204ENST00000373825 MT1BP07438 61 aa5.28□□□□□ -1.56
SRPK1-204ENST00000373825 KRTAP19-8Q3LI54 63 aa5.28□□□□□ -1.56
SRPK1-204ENST00000373825 FLGP20930 4061 aaPredicted RBP5.25□□□□□ -1.57
SRPK1-204ENST00000373825 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
SRPK1-204ENST00000373825 LCE2CQ5TA81 110 aa5.23□□□□□ -1.57
SRPK1-204ENST00000373825 MT1GP13640 62 aa5.17□□□□□ -1.58
SRPK1-204ENST00000373825 KRTAP9-8Q9BYQ0 159 aa5.14□□□□□ -1.59
SRPK1-204ENST00000373825 UBR4Q5T4S7 5183 aa5.14□□□□□ -1.59
SRPK1-204ENST00000373825 FAT4Q6V0I7 4981 aa5.11□□□□□ -1.59
SRPK1-204ENST00000373825 HERC1Q15751 4861 aa5.09□□□□□ -1.59
SRPK1-204ENST00000373825 HMCN2Q8NDA2 5059 aa5.02□□□□□ -1.61
SRPK1-204ENST00000373825 KRTAP9-6A8MVA2 160 aa4.97□□□□□ -1.61
SRPK1-204ENST00000373825 LCE3DQ9BYE3 92 aa4.97□□□□□ -1.61
SRPK1-204ENST00000373825 BIRC6Q9NR09 4857 aa4.96□□□□□ -1.61
SRPK1-204ENST00000373825 PRM1P04553 51 aa4.95□□□□□ -1.62
SRPK1-204ENST00000373825 KRTAP2-3P0C7H8 128 aa4.95□□□□□ -1.62
SRPK1-204ENST00000373825 KRTAP2-4Q9BYR9 128 aa4.95□□□□□ -1.62
SRPK1-204ENST00000373825 KRTAP2-1Q9BYU5 128 aa4.95□□□□□ -1.62
SRPK1-204ENST00000373825 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
SRPK1-204ENST00000373825 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
SRPK1-204ENST00000373825 KRTAP9-3Q9BYQ3 159 aa4.92□□□□□ -1.62
SRPK1-204ENST00000373825 LCE3EQ5T5B0 92 aa4.92□□□□□ -1.62
SRPK1-204ENST00000373825 RNF213Q63HN8 5207 aa4.91□□□□□ -1.62
SRPK1-204ENST00000373825 PCLOQ9Y6V0 5065 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms